CircRNA Information

General Information
circRNA Basic Information
CircID chr7:100676535|100676799
Strand +
CircType exon
Host Gene ENSG00000172354.8;
Algorism CIRI2;
Sequence CTTGAGTCGGTCCCCCAGTGCATGGCATAGATCTTTGCCAGGTGCCCACGGAGGGTCCTCCGGGTCCTCATCTGGATTCTCCCCACTGGGTCCAGCCCAGCTGTGATCTGGAGGTAGAGACAGAATGCGCTCGGGGAGGCCCAGGCAGCAGGACTGCAGAGGGCAGCGGCCTCTGATCCTTGCCCCTTCAACCCCTAGTTACGCTCTGGCCACCAAGTGCCCTCACCTGGGTCAGTGTTGAGTCCCCACATGCTTTTCGGGCATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:100676535|100676799 hsa-miR-141-5p 0 0 1
chr7:100676535|100676799 hsa-miR-141-3p 0 0 1
chr7:100676535|100676799 hsa-miR-200a-5p 0 0 1
chr7:100676535|100676799 hsa-miR-200a-3p 0 0 1
chr7:100676535|100676799 hsa-miR-370-5p 0 0 1
chr7:100676535|100676799 hsa-miR-370-3p 0 0 1
chr7:100676535|100676799 hsa-miR-383-5p 0 0 1
chr7:100676535|100676799 hsa-miR-383-3p 0 0 1
chr7:100676535|100676799 hsa-miR-593-5p 0 0 1
chr7:100676535|100676799 hsa-miR-593-3p 0 0 1
chr7:100676535|100676799 hsa-miR-625-5p 0 0 1
chr7:100676535|100676799 hsa-miR-625-3p 0 0 1
chr7:100676535|100676799 hsa-miR-637 1 0 1
chr7:100676535|100676799 hsa-miR-661 1 1 1
chr7:100676535|100676799 hsa-miR-939-5p 0 0 1
chr7:100676535|100676799 hsa-miR-939-3p 0 0 1
chr7:100676535|100676799 hsa-miR-1205 0 0 1
chr7:100676535|100676799 hsa-miR-1275 0 1 1
chr7:100676535|100676799 hsa-miR-125a-3p 1 1 1
chr7:100676535|100676799 hsa-miR-491-5p 1 0 1
chr7:100676535|100676799 hsa-miR-1224-5p 0 1 1
chr7:100676535|100676799 hsa-miR-299-3p 0 0 1
chr7:100676535|100676799 hsa-miR-1184 0 0 1
chr7:100676535|100676799 hsa-miR-1207-3p 0 0 1
chr7:100676535|100676799 hsa-miR-1254 0 0 1
chr7:100676535|100676799 hsa-miR-422a 0 1 0
chr7:100676535|100676799 hsa-miR-663a 1 0 0
chr7:100676535|100676799 hsa-miR-762 1 1 0
chr7:100676535|100676799 hsa-miR-1470 0 1 0
chr7:100676535|100676799 hsa-miR-1538 1 0 0
chr7:100676535|100676799 hsa-miR-711 1 1 0
chr7:100676535|100676799 hsa-miR-3132 1 0 0
chr7:100676535|100676799 hsa-miR-3154 1 0 0
chr7:100676535|100676799 hsa-miR-3175 0 1 0
chr7:100676535|100676799 hsa-miR-4322 1 0 0
chr7:100676535|100676799 hsa-miR-4278 1 0 0
chr7:100676535|100676799 hsa-miR-3652 1 0 0
chr7:100676535|100676799 hsa-miR-378g 0 1 0
chr7:100676535|100676799 hsa-miR-4430 0 1 0
chr7:100676535|100676799 hsa-miR-4505 1 0 0
chr7:100676535|100676799 hsa-miR-1587 1 1 0
chr7:100676535|100676799 hsa-miR-4688 1 1 0
chr7:100676535|100676799 hsa-miR-4706 1 0 0
chr7:100676535|100676799 hsa-miR-4710 1 1 0
chr7:100676535|100676799 hsa-miR-4721 1 0 0
chr7:100676535|100676799 hsa-miR-4739 1 0 0
chr7:100676535|100676799 hsa-miR-4751 0 1 0
chr7:100676535|100676799 hsa-miR-4767 1 0 0
chr7:100676535|100676799 hsa-miR-5194 1 0 0
chr7:100676535|100676799 hsa-miR-5100 0 1 0
chr7:100676535|100676799 hsa-miR-6075 1 0 0
chr7:100676535|100676799 hsa-miR-6085 1 0 0
chr7:100676535|100676799 hsa-miR-8052 1 0 0
chr7:100676535|100676799 hsa-miR-8089 1 0 0
chr7:100676535|100676799 hsa-miR-150-3p 1 0 0
chr7:100676535|100676799 hsa-miR-4435 1 1 0
chr7:100676535|100676799 hsa-miR-18a-3p 0 1 0
chr7:100676535|100676799 hsa-miR-512-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6809-5p 0 1 0
chr7:100676535|100676799 hsa-miR-3150a-3p 0 1 0
chr7:100676535|100676799 hsa-miR-6857-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6089 1 0 0
chr7:100676535|100676799 hsa-miR-3677-5p 1 0 0
chr7:100676535|100676799 hsa-miR-7154-3p 0 1 0
chr7:100676535|100676799 hsa-miR-6890-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6762-3p 1 0 0
chr7:100676535|100676799 hsa-miR-6727-5p 1 0 0
chr7:100676535|100676799 hsa-miR-197-5p 1 0 0
chr7:100676535|100676799 hsa-miR-874-3p 1 0 0
chr7:100676535|100676799 hsa-miR-6742-5p 1 0 0
chr7:100676535|100676799 hsa-miR-3151-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6796-5p 1 1 0
chr7:100676535|100676799 hsa-miR-6732-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6881-5p 1 1 0
chr7:100676535|100676799 hsa-miR-6782-5p 1 0 0
chr7:100676535|100676799 hsa-miR-5006-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6882-3p 0 1 0
chr7:100676535|100676799 hsa-miR-6786-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6835-5p 1 0 0
chr7:100676535|100676799 hsa-miR-1226-5p 1 1 0
chr7:100676535|100676799 hsa-miR-6763-3p 1 0 0
chr7:100676535|100676799 hsa-miR-193b-5p 1 0 0
chr7:100676535|100676799 hsa-miR-4640-5p 1 0 0
chr7:100676535|100676799 hsa-miR-3677-3p 1 1 0
chr7:100676535|100676799 hsa-miR-4743-3p 0 1 0
chr7:100676535|100676799 hsa-miR-6818-3p 0 1 0
chr7:100676535|100676799 hsa-miR-4743-5p 1 0 0
chr7:100676535|100676799 hsa-miR-3690 0 1 0
chr7:100676535|100676799 hsa-miR-3616-3p 0 1 0
chr7:100676535|100676799 hsa-miR-6824-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6789-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6781-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6878-5p 0 1 0
chr7:100676535|100676799 hsa-miR-6864-5p 1 1 0
chr7:100676535|100676799 hsa-miR-3191-3p 1 0 0
chr7:100676535|100676799 hsa-miR-1225-5p 1 0 0
chr7:100676535|100676799 hsa-miR-1910-5p 0 1 0
chr7:100676535|100676799 hsa-miR-6778-3p 0 1 0
chr7:100676535|100676799 hsa-miR-2276-5p 0 1 0
chr7:100676535|100676799 hsa-miR-3605-3p 0 1 0
chr7:100676535|100676799 hsa-miR-6838-3p 0 1 0
chr7:100676535|100676799 hsa-miR-6888-3p 0 1 0
chr7:100676535|100676799 hsa-miR-500a-3p 0 1 0
chr7:100676535|100676799 hsa-miR-1343-5p 1 0 0
chr7:100676535|100676799 hsa-miR-5001-5p 1 1 0
chr7:100676535|100676799 hsa-miR-6743-5p 1 1 0
chr7:100676535|100676799 hsa-miR-6756-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6803-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6813-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6751-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6779-5p 1 0 0
chr7:100676535|100676799 hsa-miR-3620-5p 1 1 0
chr7:100676535|100676799 hsa-miR-4728-5p 1 0 0
chr7:100676535|100676799 hsa-miR-10396b-5p 1 0 0
chr7:100676535|100676799 hsa-miR-328-5p 1 0 0
chr7:100676535|100676799 hsa-miR-4685-5p 1 0 0
chr7:100676535|100676799 hsa-miR-4726-5p 1 0 0
chr7:100676535|100676799 hsa-miR-4745-5p 1 0 0
chr7:100676535|100676799 hsa-miR-4749-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6729-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6795-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6846-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6848-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6887-5p 1 0 0
chr7:100676535|100676799 hsa-miR-4697-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6845-5p 1 0 0
chr7:100676535|100676799 hsa-miR-365a-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6855-5p 1 0 0
chr7:100676535|100676799 hsa-miR-3184-5p 1 0 0
chr7:100676535|100676799 hsa-miR-6753-3p 1 0 0
chr7:100676535|100676799 hsa-miR-6893-3p 0 1 0
chr7:100676535|100676799 hsa-miR-4691-5p 0 1 0
chr7:100676535|100676799 hsa-miR-6876-3p 0 1 0
chr7:100676535|100676799 hsa-miR-4482-5p 0 1 0
chr7:100676535|100676799 hsa-miR-6874-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:100676535|100676799
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence LSRSPSAWHRSLPGAHGGSSGSSSGFSPLGPAQL
Nucleotide Sequence TTGAGTCGGTCCCCCAGTGCATGGCATAGATCTTTGCCAGGTGCCCACGGAGGGTCCTCCGGGTCCTCATCTGGATTCTCCCCACTGGGTCCAGCCCAGCTGTGA
CircID chr7:100676535|100676799
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MRSGRPRQQDCRGQRPLILAPSTPSYALATKCPHLGQC
Nucleotide Sequence ATGCGCTCGGGGAGGCCCAGGCAGCAGGACTGCAGAGGGCAGCGGCCTCTGATCCTTGCCCCTTCAACCCCTAGTTACGCTCTGGCCACCAAGTGCCCTCACCTGGGTCAGTGTTGA
CircID chr7:100676535|100676799
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MDSPHWVQPSCDLEVETECARGGPGSRTAEGSGL
Nucleotide Sequence CTGGATTCTCCCCACTGGGTCCAGCCCAGCTGTGATCTGGAGGTAGAGACAGAATGCGCTCGGGGAGGCCCAGGCAGCAGGACTGCAGAGGGCAGCGGCCTCTGA
CircID chr7:100676535|100676799
ORF Type ORF4
Protein Length 28
Nucleotide Length 84
Protein Sequence MPLQPLVTLWPPSALTWVSVESPHAFRA
Nucleotide Sequence TTGCCCCTTCAACCCCTAGTTACGCTCTGGCCACCAAGTGCCCTCACCTGGGTCAGTGTTGAGTCCCCACATGCTTTTCGGGCA
CircID chr7:100676535|100676799
ORF Type ORF5
Protein Length 32
Nucleotide Length 99
Protein Sequence MPSAVLLPGPPRAHSVSTSRSQLGWTQWGESR
Nucleotide Sequence CTGCCCTCTGCAGTCCTGCTGCCTGGGCCTCCCCGAGCGCATTCTGTCTCTACCTCCAGATCACAGCTGGGCTGGACCCAGTGGGGAGAATCCAGATGA
CircID chr7:100676535|100676799
ORF Type ORF6
Protein Length 53
Nucleotide Length 159
Protein Sequence MQSCCLGLPERILSLPPDHSWAGPSGENPDEDPEDPPWAPGKDLCHALGDRLK
Nucleotide Sequence CTGCAGTCCTGCTGCCTGGGCCTCCCCGAGCGCATTCTGTCTCTACCTCCAGATCACAGCTGGGCTGGACCCAGTGGGGAGAATCCAGATGAGGACCCGGAGGACCCTCCGTGGGCACCTGGCAAAGATCTATGCCATGCACTGGGGGACCGACTCAAG
CircID chr7:100676535|100676799
ORF Type ORF7
Protein Length 63
Nucleotide Length 189
Protein Sequence MKGQGSEAAALCSPAAWASPSAFCLYLQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDS
Nucleotide Sequence TTGAAGGGGCAAGGATCAGAGGCCGCTGCCCTCTGCAGTCCTGCTGCCTGGGCCTCCCCGAGCGCATTCTGTCTCTACCTCCAGATCACAGCTGGGCTGGACCCAGTGGGGAGAATCCAGATGAGGACCCGGAGGACCCTCCGTGGGCACCTGGCAAAGATCTATGCCATGCACTGGGGGACCGACTCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab