CircRNA Information

General Information
circRNA Basic Information
CircID chr7:100884520|100884816
Strand -
CircType exon
Host Gene ENSG00000087087.17;
Algorism CIRI2;
Sequence GACAAGGATGAGAAGAAGGAAGACGGCAAGCAGGTCCGAGCCCTGGGTCTCCTAGTGTTGTCCCTGGCAGCCTGGGGGAGGGGGGCGGGTAGGGGTCCATAGGAGCTAGAAGTAGGGGGCTGGGGAAAATGAACCTGTGGCCTCAGCTGTGGGGGTGGGGGCCCTCTGATAAAGGTGGGAGGGGAGGTTTGACATCCCCAGTGGTTGTCTCTTACCATAGGCTGAGAATGACAGTTCTAATGATGACAAAACAAAGAAGTCGGAGGGTGATGGGGACAAGGAAGAGAAGAAAGAAGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:100884520|100884816 hsa-miR-492 1 0 1
chr7:100884520|100884816 hsa-miR-579-5p 0 0 1
chr7:100884520|100884816 hsa-miR-579-3p 0 0 1
chr7:100884520|100884816 hsa-miR-616-5p 0 0 1
chr7:100884520|100884816 hsa-miR-616-3p 0 0 1
chr7:100884520|100884816 hsa-miR-942-5p 0 0 1
chr7:100884520|100884816 hsa-miR-942-3p 0 0 1
chr7:100884520|100884816 hsa-miR-1236-5p 0 0 1
chr7:100884520|100884816 hsa-miR-1236-3p 0 0 1
chr7:100884520|100884816 hsa-miR-1237-5p 0 0 1
chr7:100884520|100884816 hsa-miR-1237-3p 0 0 1
chr7:100884520|100884816 hsa-miR-1248 0 0 1
chr7:100884520|100884816 hsa-miR-296-5p 1 1 1
chr7:100884520|100884816 hsa-miR-532-3p 0 1 1
chr7:100884520|100884816 hsa-miR-361-5p 0 0 1
chr7:100884520|100884816 hsa-miR-361-3p 0 0 1
chr7:100884520|100884816 hsa-miR-1224-3p 1 0 1
chr7:100884520|100884816 hsa-miR-502-5p 0 0 1
chr7:100884520|100884816 hsa-miR-362-5p 0 0 1
chr7:100884520|100884816 hsa-miR-1260 0 0 1
chr7:100884520|100884816 hsa-miR-1280 0 0 1
chr7:100884520|100884816 hsa-miR-326 1 0 0
chr7:100884520|100884816 hsa-miR-636 1 0 0
chr7:100884520|100884816 hsa-miR-762 1 0 0
chr7:100884520|100884816 hsa-miR-1200 1 0 0
chr7:100884520|100884816 hsa-miR-1282 1 0 0
chr7:100884520|100884816 hsa-miR-1470 1 0 0
chr7:100884520|100884816 hsa-miR-1825 1 0 0
chr7:100884520|100884816 hsa-miR-1913 1 1 0
chr7:100884520|100884816 hsa-miR-718 1 0 0
chr7:100884520|100884816 hsa-miR-4313 1 1 0
chr7:100884520|100884816 hsa-miR-3649 1 0 0
chr7:100884520|100884816 hsa-miR-3943 1 0 0
chr7:100884520|100884816 hsa-miR-3972 1 0 0
chr7:100884520|100884816 hsa-miR-4683 0 1 0
chr7:100884520|100884816 hsa-miR-6072 0 1 0
chr7:100884520|100884816 hsa-miR-211-3p 0 1 0
chr7:100884520|100884816 hsa-miR-6749-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6836-3p 1 0 0
chr7:100884520|100884816 hsa-miR-149-5p 1 0 0
chr7:100884520|100884816 hsa-miR-215-3p 0 1 0
chr7:100884520|100884816 hsa-miR-6857-5p 0 1 0
chr7:100884520|100884816 hsa-miR-6720-5p 1 0 0
chr7:100884520|100884816 hsa-miR-766-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6892-3p 1 0 0
chr7:100884520|100884816 hsa-miR-1225-3p 1 0 0
chr7:100884520|100884816 hsa-miR-7160-5p 0 1 0
chr7:100884520|100884816 hsa-miR-6840-5p 1 0 0
chr7:100884520|100884816 hsa-miR-6849-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6845-3p 1 0 0
chr7:100884520|100884816 hsa-miR-203b-3p 1 0 0
chr7:100884520|100884816 hsa-miR-877-3p 1 0 0
chr7:100884520|100884816 hsa-miR-5006-5p 0 1 0
chr7:100884520|100884816 hsa-miR-6884-3p 1 1 0
chr7:100884520|100884816 hsa-miR-1343-3p 1 0 0
chr7:100884520|100884816 hsa-miR-615-5p 1 0 0
chr7:100884520|100884816 hsa-miR-5088-5p 0 1 0
chr7:100884520|100884816 hsa-miR-4763-5p 1 0 0
chr7:100884520|100884816 hsa-miR-6763-3p 1 0 0
chr7:100884520|100884816 hsa-miR-7108-3p 1 1 0
chr7:100884520|100884816 hsa-miR-1247-5p 1 0 0
chr7:100884520|100884816 hsa-miR-4707-3p 1 0 0
chr7:100884520|100884816 hsa-miR-1908-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6894-3p 1 1 0
chr7:100884520|100884816 hsa-miR-7113-3p 1 0 0
chr7:100884520|100884816 hsa-miR-4783-5p 1 0 0
chr7:100884520|100884816 hsa-miR-6809-3p 0 1 0
chr7:100884520|100884816 hsa-miR-7111-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6830-3p 1 1 0
chr7:100884520|100884816 hsa-miR-4667-3p 1 0 0
chr7:100884520|100884816 hsa-miR-4446-5p 1 0 0
chr7:100884520|100884816 hsa-miR-6736-3p 1 0 0
chr7:100884520|100884816 hsa-miR-146b-3p 1 0 0
chr7:100884520|100884816 hsa-miR-1306-5p 0 1 0
chr7:100884520|100884816 hsa-miR-6769a-3p 1 0 0
chr7:100884520|100884816 hsa-miR-4646-3p 1 1 0
chr7:100884520|100884816 hsa-miR-7160-3p 0 1 0
chr7:100884520|100884816 hsa-miR-4707-5p 1 0 0
chr7:100884520|100884816 hsa-miR-1226-3p 1 0 0
chr7:100884520|100884816 hsa-miR-7106-3p 1 0 0
chr7:100884520|100884816 hsa-miR-4687-5p 1 0 0
chr7:100884520|100884816 hsa-miR-6828-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6887-3p 0 1 0
chr7:100884520|100884816 hsa-miR-6793-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6752-3p 1 1 0
chr7:100884520|100884816 hsa-miR-6826-3p 0 1 0
chr7:100884520|100884816 hsa-miR-7113-5p 0 1 0
chr7:100884520|100884816 hsa-miR-4749-3p 1 0 0
chr7:100884520|100884816 hsa-miR-3124-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6883-3p 1 0 0
chr7:100884520|100884816 hsa-miR-4433a-5p 1 0 0
chr7:100884520|100884816 hsa-miR-4717-5p 0 1 0
chr7:100884520|100884816 hsa-miR-6734-3p 0 1 0
chr7:100884520|100884816 hsa-miR-6846-3p 1 1 0
chr7:100884520|100884816 hsa-miR-6729-3p 1 0 0
chr7:100884520|100884816 hsa-miR-3157-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6780b-3p 1 1 0
chr7:100884520|100884816 hsa-miR-6800-3p 1 0 0
chr7:100884520|100884816 hsa-miR-3162-3p 1 1 0
chr7:100884520|100884816 hsa-miR-3682-5p 0 1 0
chr7:100884520|100884816 hsa-miR-6752-5p 1 0 0
chr7:100884520|100884816 hsa-miR-3127-3p 1 1 0
chr7:100884520|100884816 hsa-miR-320a-5p 1 1 0
chr7:100884520|100884816 hsa-miR-4685-3p 1 0 0
chr7:100884520|100884816 hsa-miR-10396a-5p 1 0 0
chr7:100884520|100884816 hsa-miR-4685-5p 1 1 0
chr7:100884520|100884816 hsa-miR-4700-5p 0 1 0
chr7:100884520|100884816 hsa-miR-4722-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6893-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6756-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6862-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6810-3p 1 1 0
chr7:100884520|100884816 hsa-miR-10392-3p 1 0 0
chr7:100884520|100884816 hsa-miR-6891-3p 1 0 0
chr7:100884520|100884816 hsa-miR-3085-3p 1 0 0
chr7:100884520|100884816 hsa-miR-4691-5p 1 0 0
chr7:100884520|100884816 hsa-miR-6876-3p 1 1 0
chr7:100884520|100884816 hsa-miR-6764-5p 0 1 0
chr7:100884520|100884816 hsa-miR-4661-5p 1 1 0
chr7:100884520|100884816 hsa-miR-664b-3p 1 0 0
chr7:100884520|100884816 hsa-miR-1250-3p 1 1 0
chr7:100884520|100884816 hsa-miR-664a-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:100884520|100884816
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence MGKMNLWPQLWGWGPSDKGGRGGLTSPVVVSYHRLRMTVLMMTKQRSRRVMGTRKRRKK
Nucleotide Sequence CTGGGGAAAATGAACCTGTGGCCTCAGCTGTGGGGGTGGGGGCCCTCTGATAAAGGTGGGAGGGGAGGTTTGACATCCCCAGTGGTTGTCTCTTACCATAGGCTGAGAATGACAGTTCTAATGATGACAAAACAAAGAAGTCGGAGGGTGATGGGGACAAGGAAGAGAAGAAAGAAG
CircID chr7:100884520|100884816
ORF Type ORF2
Protein Length 57
Nucleotide Length 174
Protein Sequence MSPSPSDFFVLSSLELSFSAYGKRQPLGMSNLPSHLYQRAPTPTAEATGSFSPAPYF
Nucleotide Sequence TTGTCCCCATCACCCTCCGACTTCTTTGTTTTGTCATCATTAGAACTGTCATTCTCAGCCTATGGTAAGAGACAACCACTGGGGATGTCAAACCTCCCCTCCCACCTTTATCAGAGGGCCCCCACCCCCACAGCTGAGGCCACAGGTTCATTTTCCCCAGCCCCCTACTTCTAG
CircID chr7:100884520|100884816
ORF Type ORF3
Protein Length 72
Nucleotide Length 216
Protein Sequence MVRDNHWGCQTSPPTFIRGPPPPQLRPQVHFPQPPTSSSYGPLPAPLPQAARDNTRRPRARTCLPSSFFSSL
Nucleotide Sequence ATGGTAAGAGACAACCACTGGGGATGTCAAACCTCCCCTCCCACCTTTATCAGAGGGCCCCCACCCCCACAGCTGAGGCCACAGGTTCATTTTCCCCAGCCCCCTACTTCTAGCTCCTATGGACCCCTACCCGCCCCCCTCCCCCAGGCTGCCAGGGACAACACTAGGAGACCCAGGGCTCGGACCTGCTTGCCGTCTTCCTTCTTCTCATCCTTG
CircID chr7:100884520|100884816
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MDPYPPPSPRLPGTTLGDPGLGPACRLPSSHPC
Nucleotide Sequence ATGGACCCCTACCCGCCCCCCTCCCCCAGGCTGCCAGGGACAACACTAGGAGACCCAGGGCTCGGACCTGCTTGCCGTCTTCCTTCTTCTCATCCTTGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab