CircRNA Information

General Information
circRNA Basic Information
CircID chr7:100888290|100888552
Strand +
CircType exon
Host Gene ENSG00000087087.17;
Algorism CIRI2;
Sequence GGCTCAAAAGAAATCAACATCGTCTGGGGCATCCAGGTCCCGATATTCCACAATGGCCCTTGGGTCTCCACGAACCATCCTGTGAGGTGAGAGGTACAGGATGAGAGCTGAGGGCTCCCAAAAGGGAGTCTGCAGGCGGCAACAAAGCTTGGGCGTCTGCCCTCCTCACCTGTTGCGAGGTTTCCCAGGATAACCTCCCTGGCCTCGGAAGGCATCATAGTTCCCTCGACCAGCACCATACGGGGCATGGGGGTATGGAGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:100888290|100888552 hsa-miR-204-5p 0 0 1
chr7:100888290|100888552 hsa-miR-204-3p 0 0 1
chr7:100888290|100888552 hsa-miR-211-5p 0 0 1
chr7:100888290|100888552 hsa-miR-211-3p 0 0 1
chr7:100888290|100888552 hsa-miR-154-5p 0 0 1
chr7:100888290|100888552 hsa-miR-154-3p 0 0 1
chr7:100888290|100888552 hsa-miR-492 0 0 1
chr7:100888290|100888552 hsa-miR-552-5p 0 0 1
chr7:100888290|100888552 hsa-miR-552-3p 0 0 1
chr7:100888290|100888552 hsa-miR-619-5p 0 0 1
chr7:100888290|100888552 hsa-miR-619-3p 0 0 1
chr7:100888290|100888552 hsa-miR-631 0 1 1
chr7:100888290|100888552 hsa-miR-920 0 0 1
chr7:100888290|100888552 hsa-miR-1229-5p 0 0 1
chr7:100888290|100888552 hsa-miR-1229-3p 0 0 1
chr7:100888290|100888552 hsa-miR-1272 0 0 1
chr7:100888290|100888552 hsa-miR-1321 0 1 1
chr7:100888290|100888552 hsa-miR-1322 0 1 1
chr7:100888290|100888552 hsa-miR-125a-3p 0 1 1
chr7:100888290|100888552 hsa-miR-486-5p 0 0 1
chr7:100888290|100888552 hsa-miR-532-5p 0 1 1
chr7:100888290|100888552 hsa-miR-513a-5p 0 1 1
chr7:100888290|100888552 hsa-miR-1233 0 0 1
chr7:100888290|100888552 hsa-miR-220c 0 0 1
chr7:100888290|100888552 hsa-miR-138 0 0 1
chr7:100888290|100888552 hsa-miR-1470 1 0 0
chr7:100888290|100888552 hsa-miR-4287 0 1 0
chr7:100888290|100888552 hsa-miR-4290 0 1 0
chr7:100888290|100888552 hsa-miR-3621 1 0 0
chr7:100888290|100888552 hsa-miR-3649 0 1 0
chr7:100888290|100888552 hsa-miR-3661 0 1 0
chr7:100888290|100888552 hsa-miR-4441 0 1 0
chr7:100888290|100888552 hsa-miR-4466 1 0 0
chr7:100888290|100888552 hsa-miR-4706 1 0 0
chr7:100888290|100888552 hsa-miR-4710 0 1 0
chr7:100888290|100888552 hsa-miR-4739 1 1 0
chr7:100888290|100888552 hsa-miR-4779 0 1 0
chr7:100888290|100888552 hsa-miR-6127 1 0 0
chr7:100888290|100888552 hsa-miR-6131 1 1 0
chr7:100888290|100888552 hsa-miR-6133 1 0 0
chr7:100888290|100888552 hsa-miR-8059 0 1 0
chr7:100888290|100888552 hsa-miR-8089 1 0 0
chr7:100888290|100888552 hsa-miR-12125 0 1 0
chr7:100888290|100888552 hsa-miR-1273h-3p 0 1 0
chr7:100888290|100888552 hsa-miR-671-5p 1 0 0
chr7:100888290|100888552 hsa-miR-6799-5p 0 1 0
chr7:100888290|100888552 hsa-miR-3692-5p 1 0 0
chr7:100888290|100888552 hsa-miR-139-3p 1 0 0
chr7:100888290|100888552 hsa-miR-6833-5p 0 1 0
chr7:100888290|100888552 hsa-miR-7851-3p 1 0 0
chr7:100888290|100888552 hsa-miR-4786-5p 1 0 0
chr7:100888290|100888552 hsa-miR-6089 1 0 0
chr7:100888290|100888552 hsa-miR-6880-5p 1 0 0
chr7:100888290|100888552 hsa-miR-8069 1 1 0
chr7:100888290|100888552 hsa-miR-6787-3p 0 1 0
chr7:100888290|100888552 hsa-miR-6827-5p 0 1 0
chr7:100888290|100888552 hsa-miR-5008-5p 1 0 0
chr7:100888290|100888552 hsa-miR-1226-5p 1 0 0
chr7:100888290|100888552 hsa-miR-4793-5p 0 1 0
chr7:100888290|100888552 hsa-miR-4640-5p 1 0 0
chr7:100888290|100888552 hsa-miR-6771-5p 1 0 0
chr7:100888290|100888552 hsa-miR-6786-3p 0 1 0
chr7:100888290|100888552 hsa-miR-6870-3p 0 1 0
chr7:100888290|100888552 hsa-miR-887-5p 0 1 0
chr7:100888290|100888552 hsa-miR-1250-5p 1 0 0
chr7:100888290|100888552 hsa-miR-4687-5p 0 1 0
chr7:100888290|100888552 hsa-miR-4746-3p 1 0 0
chr7:100888290|100888552 hsa-miR-6872-3p 1 1 0
chr7:100888290|100888552 hsa-miR-6859-3p 0 1 0
chr7:100888290|100888552 hsa-miR-6798-3p 0 1 0
chr7:100888290|100888552 hsa-miR-5581-3p 0 1 0
chr7:100888290|100888552 hsa-miR-1207-5p 1 0 0
chr7:100888290|100888552 hsa-miR-6754-5p 0 1 0
chr7:100888290|100888552 hsa-miR-6780a-5p 1 0 0
chr7:100888290|100888552 hsa-miR-6797-5p 1 0 0
chr7:100888290|100888552 hsa-miR-4728-5p 1 1 0
chr7:100888290|100888552 hsa-miR-328-5p 1 0 0
chr7:100888290|100888552 hsa-miR-4649-5p 1 0 0
chr7:100888290|100888552 hsa-miR-4726-5p 1 0 0
chr7:100888290|100888552 hsa-miR-4749-5p 1 0 0
chr7:100888290|100888552 hsa-miR-6735-5p 0 1 0
chr7:100888290|100888552 hsa-miR-6858-5p 1 1 0
chr7:100888290|100888552 hsa-miR-6885-5p 1 1 0
chr7:100888290|100888552 hsa-miR-3085-5p 1 0 0
chr7:100888290|100888552 hsa-miR-7843-5p 1 1 0
chr7:100888290|100888552 hsa-miR-6792-3p 1 1 0
chr7:100888290|100888552 hsa-miR-3059-5p 1 0 0
chr7:100888290|100888552 hsa-miR-6529-3p 0 1 0
chr7:100888290|100888552 hsa-miR-5581-5p 0 1 0
chr7:100888290|100888552 hsa-miR-655-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:100888290|100888552
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MQAATKLGRLPSSPVARFPRITSLASEGIIVPSTSTIRGMGVWR
Nucleotide Sequence CTGCAGGCGGCAACAAAGCTTGGGCGTCTGCCCTCCTCACCTGTTGCGAGGTTTCCCAGGATAACCTCCCTGGCCTCGGAAGGCATCATAGTTCCCTCGACCAGCACCATACGGGGCATGGGGGTATGGAGG

CircID chr7:100888290|100888552
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MRAEGSQKGVCRRQQSLGVCPPHLLRGFPG
Nucleotide Sequence ATGAGAGCTGAGGGCTCCCAAAAGGGAGTCTGCAGGCGGCAACAAAGCTTGGGCGTCTGCCCTCCTCACCTGTTGCGAGGTTTCCCAGGATAA

CircID chr7:100888290|100888552
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MGHPGPDIPQWPLGLHEPSCEVRGTG
Nucleotide Sequence CTGGGGCATCCAGGTCCCGATATTCCACAATGGCCCTTGGGTCTCCACGAACCATCCTGTGAGGTGAGAGGTACAGGATGA

CircID chr7:100888290|100888552
ORF Type ORF4
Protein Length 52
Nucleotide Length 156
Protein Sequence MRAPKRESAGGNKAWASALLTCCEVSQDNLPGLGRHHSSLDQHHTGHGGMEG
Nucleotide Sequence CTGAGGGCTCCCAAAAGGGAGTCTGCAGGCGGCAACAAAGCTTGGGCGTCTGCCCTCCTCACCTGTTGCGAGGTTTCCCAGGATAACCTCCCTGGCCTCGGAAGGCATCATAGTTCCCTCGACCAGCACCATACGGGGCATGGGGGTATGGAGGGC

CircID chr7:100888290|100888552
ORF Type ORF5
Protein Length 82
Nucleotide Length 246
Protein Sequence MPRMVLVEGTMMPSEAREVILGNLATGEEGRRPSFVAACRLPFGSPQLSSCTSHLTGWFVETQGPLWNIGTWMPQTMLISFE
Nucleotide Sequence ATGCCCCGTATGGTGCTGGTCGAGGGAACTATGATGCCTTCCGAGGCCAGGGAGGTTATCCTGGGAAACCTCGCAACAGGTGAGGAGGGCAGACGCCCAAGCTTTGTTGCCGCCTGCAGACTCCCTTTTGGGAGCCCTCAGCTCTCATCCTGTACCTCTCACCTCACAGGATGGTTCGTGGAGACCCAAGGGCCATTGTGGAATATCGGGACCTGGATGCCCCAGACGATGTTGATTTCTTTTGAG

CircID chr7:100888290|100888552
ORF Type ORF6
Protein Length 43
Nucleotide Length 132
Protein Sequence MLPPADSLLGALSSHPVPLTSQDGSWRPKGHCGISGPGCPRRC
Nucleotide Sequence TTGTTGCCGCCTGCAGACTCCCTTTTGGGAGCCCTCAGCTCTCATCCTGTACCTCTCACCTCACAGGATGGTTCGTGGAGACCCAAGGGCCATTGTGGAATATCGGGACCTGGATGCCCCAGACGATGTTGA

CircID chr7:100888290|100888552
ORF Type ORF7
Protein Length 43
Nucleotide Length 132
Protein Sequence MQTPFWEPSALILYLSPHRMVRGDPRAIVEYRDLDAPDDVDFF
Nucleotide Sequence CTGCAGACTCCCTTTTGGGAGCCCTCAGCTCTCATCCTGTACCTCTCACCTCACAGGATGGTTCGTGGAGACCCAAGGGCCATTGTGGAATATCGGGACCTGGATGCCCCAGACGATGTTGATTTCTTTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites