CircRNA Information

General Information
circRNA Basic Information
CircID chr7:101004761|101004934
Strand +
CircType exon
Host Gene ENSG00000205277.8;
Algorism CIRI2;
Sequence TGAGGCCTGAGGTGGTGGTGCTGGCAGGGAACGCTGTTGTGTGTGTTGACTCTGCTTGGCTATACAAGCTGGTGGGTTCTCCACTGATGCTGGAGCTTGTCATGCTGGCAGGTGAGAGTGTTTGGTCTGGTGATCTGGAGCTACTGTAAAGGATGGTAGATTTTGCACTGAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:101004761|101004934 hsa-miR-19a-5p 0 0 1
chr7:101004761|101004934 hsa-miR-19a-3p 0 0 1
chr7:101004761|101004934 hsa-miR-29a-5p 0 0 1
chr7:101004761|101004934 hsa-miR-29a-3p 0 0 1
chr7:101004761|101004934 hsa-miR-148a-5p 0 0 1
chr7:101004761|101004934 hsa-miR-148a-3p 0 0 1
chr7:101004761|101004934 hsa-miR-130a-5p 0 0 1
chr7:101004761|101004934 hsa-miR-130a-3p 0 0 1
chr7:101004761|101004934 hsa-miR-144-5p 0 0 1
chr7:101004761|101004934 hsa-miR-144-3p 0 0 1
chr7:101004761|101004934 hsa-miR-152-5p 0 0 1
chr7:101004761|101004934 hsa-miR-152-3p 0 0 1
chr7:101004761|101004934 hsa-miR-29c-5p 0 0 1
chr7:101004761|101004934 hsa-miR-29c-3p 0 0 1
chr7:101004761|101004934 hsa-miR-301a-5p 0 0 1
chr7:101004761|101004934 hsa-miR-301a-3p 0 0 1
chr7:101004761|101004934 hsa-miR-130b-5p 0 0 1
chr7:101004761|101004934 hsa-miR-130b-3p 0 0 1
chr7:101004761|101004934 hsa-miR-148b-5p 0 0 1
chr7:101004761|101004934 hsa-miR-148b-3p 0 0 1
chr7:101004761|101004934 hsa-miR-505-5p 0 0 1
chr7:101004761|101004934 hsa-miR-505-3p 0 0 1
chr7:101004761|101004934 hsa-miR-568 0 0 1
chr7:101004761|101004934 hsa-miR-589-5p 0 0 1
chr7:101004761|101004934 hsa-miR-589-3p 0 0 1
chr7:101004761|101004934 hsa-miR-643 0 1 1
chr7:101004761|101004934 hsa-miR-454-5p 0 0 1
chr7:101004761|101004934 hsa-miR-454-3p 0 0 1
chr7:101004761|101004934 hsa-miR-766-5p 0 0 1
chr7:101004761|101004934 hsa-miR-766-3p 0 0 1
chr7:101004761|101004934 hsa-miR-301b-5p 0 0 1
chr7:101004761|101004934 hsa-miR-301b-3p 0 0 1
chr7:101004761|101004934 hsa-miR-1226-5p 0 0 1
chr7:101004761|101004934 hsa-miR-1226-3p 0 0 1
chr7:101004761|101004934 hsa-miR-1229-5p 0 0 1
chr7:101004761|101004934 hsa-miR-1229-3p 0 0 1
chr7:101004761|101004934 hsa-miR-1202 1 0 1
chr7:101004761|101004934 hsa-miR-501-5p 0 0 1
chr7:101004761|101004934 hsa-miR-582-5p 0 0 1
chr7:101004761|101004934 hsa-miR-338-3p 0 1 1
chr7:101004761|101004934 hsa-miR-220b 0 0 1
chr7:101004761|101004934 hsa-miR-1274a 0 0 1
chr7:101004761|101004934 hsa-miR-19b 0 0 1
chr7:101004761|101004934 hsa-miR-29b 0 0 1
chr7:101004761|101004934 hsa-miR-101 0 0 1
chr7:101004761|101004934 hsa-miR-634 0 1 0
chr7:101004761|101004934 hsa-miR-3972 0 1 0
chr7:101004761|101004934 hsa-miR-8485 0 1 0
chr7:101004761|101004934 hsa-miR-12125 0 1 0
chr7:101004761|101004934 hsa-miR-3663-3p 1 0 0
chr7:101004761|101004934 hsa-miR-593-5p 1 0 0
chr7:101004761|101004934 hsa-miR-770-5p 1 1 0
chr7:101004761|101004934 hsa-miR-1915-5p 1 0 0
chr7:101004761|101004934 hsa-miR-491-5p 1 0 0
chr7:101004761|101004934 hsa-miR-4711-5p 0 1 0
chr7:101004761|101004934 hsa-miR-3194-5p 1 0 0
chr7:101004761|101004934 hsa-miR-2277-3p 1 0 0
chr7:101004761|101004934 hsa-miR-584-3p 1 0 0
chr7:101004761|101004934 hsa-miR-7112-3p 0 1 0
chr7:101004761|101004934 hsa-miR-1288-5p 0 1 0
chr7:101004761|101004934 hsa-miR-6752-3p 0 1 0
chr7:101004761|101004934 hsa-miR-4639-3p 0 1 0
chr7:101004761|101004934 hsa-miR-4727-5p 1 1 0
chr7:101004761|101004934 hsa-miR-5003-5p 0 1 0
chr7:101004761|101004934 hsa-miR-4722-3p 1 1 0
chr7:101004761|101004934 hsa-miR-6727-3p 0 1 0
chr7:101004761|101004934 hsa-miR-9851-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:101004761|101004934
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MRWWCWQGTLLCVLTLLGYTSWWVLH
Nucleotide Sequence CTGAGGTGGTGGTGCTGGCAGGGAACGCTGTTGTGTGTGTTGACTCTGCTTGGCTATACAAGCTGGTGGGTTCTCCACTGA

CircID chr7:101004761|101004934
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MAGNAVVCVDSAWLYKLVGSPLMLELVMLAGESVWSGDLELL
Nucleotide Sequence CTGGCAGGGAACGCTGTTGTGTGTGTTGACTCTGCTTGGCTATACAAGCTGGTGGGTTCTCCACTGATGCTGGAGCTTGTCATGCTGGCAGGTGAGAGTGTTTGGTCTGGTGATCTGGAGCTACTGTAA

CircID chr7:101004761|101004934
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MTSSSISGEPTSLYSQAESTHTTAFPASTTTSGL
Nucleotide Sequence ATGACAAGCTCCAGCATCAGTGGAGAACCCACCAGCTTGTATAGCCAAGCAGAGTCAACACACACAACAGCGTTCCCTGCCAGCACCACCACCTCAGGCCTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites