CircRNA Information

General Information
circRNA Basic Information
CircID chr7:101043397|101043606
Strand -
CircType exon
Host Gene ENSG00000169876.12;
Algorism CIRI2;
Sequence CCGCAATGACTACTGCAGCTCCCCTCACATATGTGACCATGTCTACTGCCCCCAGCACACCCAGAACAACCAGCAGAGGCTGCACTACTTCTGCATCAACGCTTTCTGCAACCAGTACACCTCACACCTCTACTTCTGTCACCACCCGTCCTGTGACCCCTTCATCAGAATCCAGCAGGCCGTCAACAATTACTTCTCACACCATCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:101043397|101043606 hsa-miR-130a-5p 0 0 1
chr7:101043397|101043606 hsa-miR-130a-3p 0 0 1
chr7:101043397|101043606 hsa-miR-301a-5p 0 0 1
chr7:101043397|101043606 hsa-miR-301a-3p 0 0 1
chr7:101043397|101043606 hsa-miR-130b-5p 0 0 1
chr7:101043397|101043606 hsa-miR-130b-3p 0 0 1
chr7:101043397|101043606 hsa-miR-370-5p 0 0 1
chr7:101043397|101043606 hsa-miR-370-3p 0 0 1
chr7:101043397|101043606 hsa-miR-558 0 0 1
chr7:101043397|101043606 hsa-miR-609 0 0 1
chr7:101043397|101043606 hsa-miR-616-5p 0 0 1
chr7:101043397|101043606 hsa-miR-616-3p 0 0 1
chr7:101043397|101043606 hsa-miR-637 1 0 1
chr7:101043397|101043606 hsa-miR-653-5p 0 0 1
chr7:101043397|101043606 hsa-miR-653-3p 0 0 1
chr7:101043397|101043606 hsa-miR-411-5p 0 0 1
chr7:101043397|101043606 hsa-miR-411-3p 0 0 1
chr7:101043397|101043606 hsa-miR-454-5p 0 0 1
chr7:101043397|101043606 hsa-miR-454-3p 0 0 1
chr7:101043397|101043606 hsa-miR-298 0 1 1
chr7:101043397|101043606 hsa-miR-301b-5p 0 0 1
chr7:101043397|101043606 hsa-miR-301b-3p 0 0 1
chr7:101043397|101043606 hsa-miR-920 1 1 1
chr7:101043397|101043606 hsa-miR-936 1 0 1
chr7:101043397|101043606 hsa-miR-939-5p 0 0 1
chr7:101043397|101043606 hsa-miR-939-3p 0 0 1
chr7:101043397|101043606 hsa-miR-1234-3p 0 0 1
chr7:101043397|101043606 hsa-miR-1287-5p 0 0 1
chr7:101043397|101043606 hsa-miR-1287-3p 0 0 1
chr7:101043397|101043606 hsa-miR-1293 1 1 1
chr7:101043397|101043606 hsa-miR-1294 0 1 1
chr7:101043397|101043606 hsa-miR-1253 0 0 1
chr7:101043397|101043606 hsa-miR-1234 0 0 1
chr7:101043397|101043606 hsa-miR-486-3p 0 0 1
chr7:101043397|101043606 hsa-miR-423-5p 0 0 1
chr7:101043397|101043606 hsa-miR-513a-5p 0 0 1
chr7:101043397|101043606 hsa-miR-199b-3p 0 0 1
chr7:101043397|101043606 hsa-miR-199a-3p 0 0 1
chr7:101043397|101043606 hsa-miR-542-3p 0 0 1
chr7:101043397|101043606 hsa-miR-220c 0 0 1
chr7:101043397|101043606 hsa-miR-138 0 0 1
chr7:101043397|101043606 hsa-miR-1300 0 0 1
chr7:101043397|101043606 hsa-miR-453 0 0 1
chr7:101043397|101043606 hsa-miR-608 1 1 0
chr7:101043397|101043606 hsa-miR-638 1 0 0
chr7:101043397|101043606 hsa-miR-762 1 0 0
chr7:101043397|101043606 hsa-miR-3138 1 0 0
chr7:101043397|101043606 hsa-miR-3141 1 0 0
chr7:101043397|101043606 hsa-miR-3154 1 0 0
chr7:101043397|101043606 hsa-miR-1193 1 0 0
chr7:101043397|101043606 hsa-miR-4299 1 0 0
chr7:101043397|101043606 hsa-miR-4316 1 0 0
chr7:101043397|101043606 hsa-miR-4257 1 0 0
chr7:101043397|101043606 hsa-miR-4281 1 0 0
chr7:101043397|101043606 hsa-miR-3936 1 0 0
chr7:101043397|101043606 hsa-miR-3945 1 0 0
chr7:101043397|101043606 hsa-miR-4436a 1 0 0
chr7:101043397|101043606 hsa-miR-4466 1 0 0
chr7:101043397|101043606 hsa-miR-4467 1 0 0
chr7:101043397|101043606 hsa-miR-4479 1 0 0
chr7:101043397|101043606 hsa-miR-2392 1 1 0
chr7:101043397|101043606 hsa-miR-4507 1 0 0
chr7:101043397|101043606 hsa-miR-4510 1 0 0
chr7:101043397|101043606 hsa-miR-1587 1 0 0
chr7:101043397|101043606 hsa-miR-4651 1 0 0
chr7:101043397|101043606 hsa-miR-4686 1 1 0
chr7:101043397|101043606 hsa-miR-4688 1 0 0
chr7:101043397|101043606 hsa-miR-4689 1 0 0
chr7:101043397|101043606 hsa-miR-4706 1 0 0
chr7:101043397|101043606 hsa-miR-4710 1 0 0
chr7:101043397|101043606 hsa-miR-4721 1 0 0
chr7:101043397|101043606 hsa-miR-5194 1 0 0
chr7:101043397|101043606 hsa-miR-5572 1 0 0
chr7:101043397|101043606 hsa-miR-548ax 1 1 0
chr7:101043397|101043606 hsa-miR-5698 1 1 0
chr7:101043397|101043606 hsa-miR-5787 1 0 0
chr7:101043397|101043606 hsa-miR-6127 1 0 0
chr7:101043397|101043606 hsa-miR-6131 1 0 0
chr7:101043397|101043606 hsa-miR-6134 1 0 0
chr7:101043397|101043606 hsa-miR-6745 1 0 0
chr7:101043397|101043606 hsa-miR-6863 0 1 0
chr7:101043397|101043606 hsa-miR-7704 1 0 0
chr7:101043397|101043606 hsa-miR-8075 1 0 0
chr7:101043397|101043606 hsa-miR-8089 1 0 0
chr7:101043397|101043606 hsa-miR-12114 0 1 0
chr7:101043397|101043606 hsa-miR-12115 1 0 0
chr7:101043397|101043606 hsa-miR-12119 1 0 0
chr7:101043397|101043606 hsa-miR-12122 0 1 0
chr7:101043397|101043606 hsa-miR-138-5p 1 0 0
chr7:101043397|101043606 hsa-miR-128-1-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6734-5p 1 1 0
chr7:101043397|101043606 hsa-miR-4731-5p 1 1 0
chr7:101043397|101043606 hsa-miR-6747-5p 1 0 0
chr7:101043397|101043606 hsa-miR-4433a-3p 1 1 0
chr7:101043397|101043606 hsa-miR-6765-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6861-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6825-5p 1 0 0
chr7:101043397|101043606 hsa-miR-4687-3p 1 0 0
chr7:101043397|101043606 hsa-miR-6799-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6728-5p 1 1 0
chr7:101043397|101043606 hsa-miR-3692-5p 1 1 0
chr7:101043397|101043606 hsa-miR-6804-5p 1 0 0
chr7:101043397|101043606 hsa-miR-5187-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6757-5p 1 0 0
chr7:101043397|101043606 hsa-miR-7847-3p 1 0 0
chr7:101043397|101043606 hsa-miR-3064-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6741-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6727-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6759-5p 1 0 0
chr7:101043397|101043606 hsa-miR-8069 1 0 0
chr7:101043397|101043606 hsa-miR-5589-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6776-5p 1 1 0
chr7:101043397|101043606 hsa-miR-6742-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6772-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6793-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6829-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6732-5p 1 1 0
chr7:101043397|101043606 hsa-miR-6782-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6821-5p 1 0 0
chr7:101043397|101043606 hsa-miR-5088-5p 1 0 0
chr7:101043397|101043606 hsa-miR-7109-5p 1 0 0
chr7:101043397|101043606 hsa-miR-1226-5p 1 0 0
chr7:101043397|101043606 hsa-miR-1228-5p 1 0 0
chr7:101043397|101043606 hsa-let-7d-5p 1 0 0
chr7:101043397|101043606 hsa-let-7b-5p 1 1 0
chr7:101043397|101043606 hsa-miR-92b-5p 1 0 0
chr7:101043397|101043606 hsa-miR-4732-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6847-5p 1 0 0
chr7:101043397|101043606 hsa-miR-4446-3p 1 0 0
chr7:101043397|101043606 hsa-miR-7156-3p 0 1 0
chr7:101043397|101043606 hsa-let-7i-5p 1 1 0
chr7:101043397|101043606 hsa-let-7c-5p 1 0 0
chr7:101043397|101043606 hsa-let-7e-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6818-5p 1 0 0
chr7:101043397|101043606 hsa-miR-4671-3p 0 1 0
chr7:101043397|101043606 hsa-miR-5580-3p 0 1 0
chr7:101043397|101043606 hsa-miR-6787-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6812-5p 1 1 0
chr7:101043397|101043606 hsa-miR-6816-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6865-5p 1 0 0
chr7:101043397|101043606 hsa-miR-1343-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6726-5p 1 1 0
chr7:101043397|101043606 hsa-miR-6737-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6743-5p 1 1 0
chr7:101043397|101043606 hsa-miR-6752-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6756-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6803-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6819-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6842-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6851-5p 1 0 0
chr7:101043397|101043606 hsa-miR-7107-5p 1 1 0
chr7:101043397|101043606 hsa-miR-7110-5p 1 0 0
chr7:101043397|101043606 hsa-miR-10401-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6722-3p 1 0 0
chr7:101043397|101043606 hsa-miR-6779-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6780a-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6788-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6879-5p 1 0 0
chr7:101043397|101043606 hsa-miR-3620-5p 1 0 0
chr7:101043397|101043606 hsa-miR-4728-5p 1 0 0
chr7:101043397|101043606 hsa-miR-5196-5p 1 0 0
chr7:101043397|101043606 hsa-miR-1237-5p 1 0 0
chr7:101043397|101043606 hsa-miR-328-5p 1 0 0
chr7:101043397|101043606 hsa-miR-4701-3p 1 0 0
chr7:101043397|101043606 hsa-miR-6738-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6794-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6846-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6848-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6858-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6883-5p 1 0 0
chr7:101043397|101043606 hsa-miR-4697-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6831-5p 1 1 0
chr7:101043397|101043606 hsa-miR-4758-5p 1 0 0
chr7:101043397|101043606 hsa-miR-4769-5p 0 1 0
chr7:101043397|101043606 hsa-miR-6511a-5p 1 0 0
chr7:101043397|101043606 hsa-miR-3940-5p 1 0 0
chr7:101043397|101043606 hsa-miR-1914-3p 1 0 0
chr7:101043397|101043606 hsa-miR-4665-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6877-3p 0 1 0
chr7:101043397|101043606 hsa-miR-6891-5p 1 0 0
chr7:101043397|101043606 hsa-miR-4472 1 0 0
chr7:101043397|101043606 hsa-miR-6766-5p 1 0 0
chr7:101043397|101043606 hsa-miR-342-5p 1 0 0
chr7:101043397|101043606 hsa-miR-6504-5p 1 0 0
chr7:101043397|101043606 hsa-miR-548j-5p 1 0 0
chr7:101043397|101043606 hsa-miR-548ao-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:101043397|101043606
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MPPAHPEQPAEAALLLHQRFLQPVHLTPLLLSPPVL
Nucleotide Sequence CTGCCCCCAGCACACCCAGAACAACCAGCAGAGGCTGCACTACTTCTGCATCAACGCTTTCTGCAACCAGTACACCTCACACCTCTACTTCTGTCACCACCCGTCCTGTGA
CircID chr7:101043397|101043606
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MHYFCINAFCNQYTSHLYFCHHPSCDPFIRIQQAVNNYFSHHP
Nucleotide Sequence CTGCACTACTTCTGCATCAACGCTTTCTGCAACCAGTACACCTCACACCTCTACTTCTGTCACCACCCGTCCTGTGACCCCTTCATCAGAATCCAGCAGGCCGTCAACAATTACTTCTCACACCATCCC
CircID chr7:101043397|101043606
ORF Type ORF3
Protein Length 68
Nucleotide Length 204
Protein Sequence MTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPSTITSHTIP
Nucleotide Sequence ATGACTACTGCAGCTCCCCTCACATATGTGACCATGTCTACTGCCCCCAGCACACCCAGAACAACCAGCAGAGGCTGCACTACTTCTGCATCAACGCTTTCTGCAACCAGTACACCTCACACCTCTACTTCTGTCACCACCCGTCCTGTGACCCCTTCATCAGAATCCAGCAGGCCGTCAACAATTACTTCTCACACCATCCCA
CircID chr7:101043397|101043606
ORF Type ORF4
Protein Length 38
Nucleotide Length 114
Protein Sequence MVAESVDAEVVQPLLVVLGVLGAVDMVTYVRGAAVVIA
Nucleotide Sequence CTGGTTGCAGAAAGCGTTGATGCAGAAGTAGTGCAGCCTCTGCTGGTTGTTCTGGGTGTGCTGGGGGCAGTAGACATGGTCACATATGTGAGGGGAGCTGCAGTAGTCATTGCG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab