CircRNA Information

General Information
circRNA Basic Information
CircID chr7:101097505|101097656
Strand +
CircType exon
Host Gene ENSG00000169871.11;
Algorism CIRI2;
Sequence CTCCTTCCTAATGTCTTTATACACAGGCCCTCTTCCATCTGGTCCCTAAGATTTCTCACCCAGCACCTCAGGTGAGATCTAGTCTGATGTTGCTGTACTTTGTATACTGCTCCAATCACAGGAGTCTGCAGTTTCTAGAAAATCTATTTTTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:101097505|101097656 hsa-miR-381-5p 0 0 1
chr7:101097505|101097656 hsa-miR-381-3p 0 0 1
chr7:101097505|101097656 hsa-miR-340-5p 0 0 1
chr7:101097505|101097656 hsa-miR-340-3p 0 0 1
chr7:101097505|101097656 hsa-miR-539-5p 0 0 1
chr7:101097505|101097656 hsa-miR-539-3p 0 0 1
chr7:101097505|101097656 hsa-miR-568 0 0 1
chr7:101097505|101097656 hsa-miR-641 0 1 1
chr7:101097505|101097656 hsa-miR-300 0 0 1
chr7:101097505|101097656 hsa-miR-1229-5p 0 0 1
chr7:101097505|101097656 hsa-miR-1229-3p 0 0 1
chr7:101097505|101097656 hsa-miR-548k 0 0 1
chr7:101097505|101097656 hsa-miR-1262 0 0 1
chr7:101097505|101097656 hsa-miR-28-3p 0 1 1
chr7:101097505|101097656 hsa-miR-142-5p 0 0 1
chr7:101097505|101097656 hsa-miR-509-3p 0 0 1
chr7:101097505|101097656 hsa-miR-524-5p 0 0 1
chr7:101097505|101097656 hsa-miR-518d-5p 0 0 1
chr7:101097505|101097656 hsa-miR-519b-5p 0 0 1
chr7:101097505|101097656 hsa-miR-519c-5p 0 0 1
chr7:101097505|101097656 hsa-miR-520c-5p 0 0 1
chr7:101097505|101097656 hsa-miR-509-3-5p 0 1 1
chr7:101097505|101097656 hsa-miR-509-5p 0 1 1
chr7:101097505|101097656 hsa-miR-520d-5p 0 0 1
chr7:101097505|101097656 hsa-miR-7 0 0 1
chr7:101097505|101097656 hsa-miR-526a 0 0 1
chr7:101097505|101097656 hsa-miR-762 1 0 0
chr7:101097505|101097656 hsa-miR-1182 1 0 0
chr7:101097505|101097656 hsa-miR-2861 1 0 0
chr7:101097505|101097656 hsa-miR-4259 1 0 0
chr7:101097505|101097656 hsa-miR-4534 1 0 0
chr7:101097505|101097656 hsa-miR-3973 0 1 0
chr7:101097505|101097656 hsa-miR-4657 1 0 0
chr7:101097505|101097656 hsa-miR-4739 1 0 0
chr7:101097505|101097656 hsa-miR-4788 1 0 0
chr7:101097505|101097656 hsa-miR-8054 0 1 0
chr7:101097505|101097656 hsa-miR-8067 0 1 0
chr7:101097505|101097656 hsa-miR-8085 1 0 0
chr7:101097505|101097656 hsa-miR-8089 1 0 0
chr7:101097505|101097656 hsa-miR-12126 1 0 0
chr7:101097505|101097656 hsa-miR-1273h-3p 0 1 0
chr7:101097505|101097656 hsa-miR-6833-5p 1 0 0
chr7:101097505|101097656 hsa-miR-1227-5p 1 0 0
chr7:101097505|101097656 hsa-miR-6867-5p 1 0 0
chr7:101097505|101097656 hsa-miR-6741-5p 1 0 0
chr7:101097505|101097656 hsa-miR-7845-5p 1 0 0
chr7:101097505|101097656 hsa-miR-5088-5p 1 0 0
chr7:101097505|101097656 hsa-miR-4738-3p 0 1 0
chr7:101097505|101097656 hsa-miR-4640-5p 1 0 0
chr7:101097505|101097656 hsa-miR-6749-5p 1 0 0
chr7:101097505|101097656 hsa-miR-3162-5p 1 0 0
chr7:101097505|101097656 hsa-miR-6892-5p 1 0 0
chr7:101097505|101097656 hsa-miR-4776-5p 1 0 0
chr7:101097505|101097656 hsa-miR-3120-3p 0 1 0
chr7:101097505|101097656 hsa-miR-1250-5p 1 0 0
chr7:101097505|101097656 hsa-miR-4695-3p 0 1 0
chr7:101097505|101097656 hsa-miR-1285-5p 0 1 0
chr7:101097505|101097656 hsa-miR-499b-5p 0 1 0
chr7:101097505|101097656 hsa-miR-548av-3p 0 1 0
chr7:101097505|101097656 hsa-miR-6812-5p 1 0 0
chr7:101097505|101097656 hsa-miR-6756-5p 1 0 0
chr7:101097505|101097656 hsa-miR-6797-5p 1 0 0
chr7:101097505|101097656 hsa-miR-10526-3p 1 0 0
chr7:101097505|101097656 hsa-miR-4726-5p 1 0 0
chr7:101097505|101097656 hsa-miR-6848-5p 1 0 0
chr7:101097505|101097656 hsa-miR-6858-5p 1 0 0
chr7:101097505|101097656 hsa-miR-6845-5p 1 0 0
chr7:101097505|101097656 hsa-miR-30c-1-3p 0 1 0
chr7:101097505|101097656 hsa-miR-6736-5p 1 1 0
chr7:101097505|101097656 hsa-miR-6750-5p 1 0 0
chr7:101097505|101097656 hsa-miR-6762-5p 1 1 0
chr7:101097505|101097656 hsa-miR-3622b-3p 0 1 0
chr7:101097505|101097656 hsa-miR-200a-5p 0 1 0
chr7:101097505|101097656 hsa-miR-6508-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:101097505|101097656
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MVPKISHPAPQVRSSLMLLYFVYCSNHRSLQFLENLFL
Nucleotide Sequence CTGGTCCCTAAGATTTCTCACCCAGCACCTCAGGTGAGATCTAGTCTGATGTTGCTGTACTTTGTATACTGCTCCAATCACAGGAGTCTGCAGTTTCTAGAAAATCTATTTTTG
CircID chr7:101097505|101097656
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MQTPVIGAVYKVQQHQTRSHLRCWVRNLRDQMEEGLCIKTLGR
Nucleotide Sequence CTGCAGACTCCTGTGATTGGAGCAGTATACAAAGTACAGCAACATCAGACTAGATCTCACCTGAGGTGCTGGGTGAGAAATCTTAGGGACCAGATGGAAGAGGGCCTGTGTATAAAGACATTAGGAAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab