CircRNA Information

General Information
circRNA Basic Information
CircID chr7:101137438|101137600
Strand -
CircType exon
Host Gene ENSG00000106366.8;
Algorism CIRI2;
Sequence CCTGACCCTGGGGAAAGACGCCTTCATCTGGGACAAAACTGGAGATGCATCGGGAAAGAAGAAACTCCGAAGAAAAGAATTTTAGTGTTAATGACTCTTTCTGAAGGAAGAGAAGACATTTGCCTTTTGTTAAAAGATGGTAAACCAGATCTGTCTCCAAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:101137438|101137600
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MGQNWRCIGKEETPKKRILVLMTLSEGREDICLLLKDGKPDLSPR
Nucleotide Sequence CTGGGACAAAACTGGAGATGCATCGGGAAAGAAGAAACTCCGAAGAAAAGAATTTTAGTGTTAATGACTCTTTCTGAAGGAAGAGAAGACATTTGCCTTTTGTTAAAAGATGGTAAACCAGATCTGTCTCCAAGA

CircID chr7:101137438|101137600
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence LTLGKDAFIWDKTGDASGKKKLRRKEF
Nucleotide Sequence CTGACCCTGGGGAAAGACGCCTTCATCTGGGACAAAACTGGAGATGCATCGGGAAAGAAGAAACTCCGAAGAAAAGAATTTTAG

CircID chr7:101137438|101137600
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence METDLVYHLLTKGKCLLFLQKESLTLKFFSSEFLLSRCISSFVPDEGVFPQGQ
Nucleotide Sequence TTGGAGACAGATCTGGTTTACCATCTTTTAACAAAAGGCAAATGTCTTCTCTTCCTTCAGAAAGAGTCATTAACACTAAAATTCTTTTCTTCGGAGTTTCTTCTTTCCCGATGCATCTCCAGTTTTGTCCCAGATGAAGGCGTCTTTCCCCAGGGTCAG

CircID chr7:101137438|101137600
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MSSLPSERVINTKILFFGVSSFPMHLQFCPR
Nucleotide Sequence ATGTCTTCTCTTCCTTCAGAAAGAGTCATTAACACTAAAATTCTTTTCTTCGGAGTTTCTTCTTTCCCGATGCATCTCCAGTTTTGTCCCAGATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites