CircRNA Information

General Information
circRNA Basic Information
CircID chr7:101206008|101206286
Strand +
CircType exon
Host Gene ENSG00000106397.10;
Algorism CIRI2;
Sequence CCCTGACACTCAACCACTCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGGGGGCCTGGCCCCCGTCCTGGGAGTTGGGGGATGGGTCTCTCTGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCTCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:101206008|101206286 hsa-miR-96-5p 0 0 1
chr7:101206008|101206286 hsa-miR-96-3p 0 0 1
chr7:101206008|101206286 hsa-miR-182-5p 0 0 1
chr7:101206008|101206286 hsa-miR-182-3p 0 0 1
chr7:101206008|101206286 hsa-miR-187-5p 0 0 1
chr7:101206008|101206286 hsa-miR-187-3p 0 0 1
chr7:101206008|101206286 hsa-miR-185-5p 0 0 1
chr7:101206008|101206286 hsa-miR-185-3p 0 0 1
chr7:101206008|101206286 hsa-miR-431-5p 0 0 1
chr7:101206008|101206286 hsa-miR-431-3p 0 0 1
chr7:101206008|101206286 hsa-miR-506-5p 0 0 1
chr7:101206008|101206286 hsa-miR-506-3p 0 0 1
chr7:101206008|101206286 hsa-miR-510-5p 0 0 1
chr7:101206008|101206286 hsa-miR-510-3p 0 0 1
chr7:101206008|101206286 hsa-miR-563 0 0 1
chr7:101206008|101206286 hsa-miR-635 0 0 1
chr7:101206008|101206286 hsa-miR-657 0 0 1
chr7:101206008|101206286 hsa-miR-658 0 1 1
chr7:101206008|101206286 hsa-miR-1271-5p 0 0 1
chr7:101206008|101206286 hsa-miR-1271-3p 0 0 1
chr7:101206008|101206286 hsa-miR-765 0 1 1
chr7:101206008|101206286 hsa-miR-873-5p 0 0 1
chr7:101206008|101206286 hsa-miR-873-3p 0 0 1
chr7:101206008|101206286 hsa-miR-920 1 0 1
chr7:101206008|101206286 hsa-miR-939-5p 0 0 1
chr7:101206008|101206286 hsa-miR-939-3p 0 0 1
chr7:101206008|101206286 hsa-miR-1200 0 0 1
chr7:101206008|101206286 hsa-miR-140-5p 0 0 1
chr7:101206008|101206286 hsa-miR-491-5p 0 0 1
chr7:101206008|101206286 hsa-miR-146b-3p 0 1 1
chr7:101206008|101206286 hsa-miR-574-5p 0 0 1
chr7:101206008|101206286 hsa-miR-1289 0 0 1
chr7:101206008|101206286 hsa-miR-361-3p 0 0 1
chr7:101206008|101206286 hsa-miR-1207-5p 1 1 1
chr7:101206008|101206286 hsa-miR-516a-3p 0 0 1
chr7:101206008|101206286 hsa-miR-124 0 0 1
chr7:101206008|101206286 hsa-miR-768-3p 0 0 1
chr7:101206008|101206286 hsa-miR-663 0 0 1
chr7:101206008|101206286 hsa-miR-604 1 0 0
chr7:101206008|101206286 hsa-miR-637 1 0 0
chr7:101206008|101206286 hsa-miR-663a 1 1 0
chr7:101206008|101206286 hsa-miR-762 1 0 0
chr7:101206008|101206286 hsa-miR-940 1 0 0
chr7:101206008|101206286 hsa-miR-1182 1 0 0
chr7:101206008|101206286 hsa-miR-3132 1 0 0
chr7:101206008|101206286 hsa-miR-3141 1 0 0
chr7:101206008|101206286 hsa-miR-3147 1 0 0
chr7:101206008|101206286 hsa-miR-3175 0 1 0
chr7:101206008|101206286 hsa-miR-4253 1 0 0
chr7:101206008|101206286 hsa-miR-3665 1 0 0
chr7:101206008|101206286 hsa-miR-4436a 1 0 0
chr7:101206008|101206286 hsa-miR-4488 1 0 0
chr7:101206008|101206286 hsa-miR-4505 1 0 0
chr7:101206008|101206286 hsa-miR-548an 0 1 0
chr7:101206008|101206286 hsa-miR-4656 1 0 0
chr7:101206008|101206286 hsa-miR-4675 1 0 0
chr7:101206008|101206286 hsa-miR-4688 1 0 0
chr7:101206008|101206286 hsa-miR-4689 1 1 0
chr7:101206008|101206286 hsa-miR-4706 0 1 0
chr7:101206008|101206286 hsa-miR-4721 1 0 0
chr7:101206008|101206286 hsa-miR-4736 1 0 0
chr7:101206008|101206286 hsa-miR-4739 1 0 0
chr7:101206008|101206286 hsa-miR-4741 1 0 0
chr7:101206008|101206286 hsa-miR-4748 0 1 0
chr7:101206008|101206286 hsa-miR-4784 0 1 0
chr7:101206008|101206286 hsa-miR-5090 1 1 0
chr7:101206008|101206286 hsa-miR-5787 1 0 0
chr7:101206008|101206286 hsa-miR-6081 1 0 0
chr7:101206008|101206286 hsa-miR-6090 1 0 0
chr7:101206008|101206286 hsa-miR-6132 1 1 0
chr7:101206008|101206286 hsa-miR-6860 1 0 0
chr7:101206008|101206286 hsa-miR-7150 1 0 0
chr7:101206008|101206286 hsa-miR-8060 1 0 0
chr7:101206008|101206286 hsa-miR-4433b-3p 1 0 0
chr7:101206008|101206286 hsa-miR-6840-3p 0 1 0
chr7:101206008|101206286 hsa-miR-6765-5p 1 0 0
chr7:101206008|101206286 hsa-miR-3150a-3p 0 1 0
chr7:101206008|101206286 hsa-miR-6861-5p 1 0 0
chr7:101206008|101206286 hsa-miR-7106-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6825-5p 1 0 0
chr7:101206008|101206286 hsa-miR-1972 1 0 0
chr7:101206008|101206286 hsa-miR-3622a-5p 1 1 0
chr7:101206008|101206286 hsa-miR-7114-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6089 1 0 0
chr7:101206008|101206286 hsa-miR-6880-5p 1 1 0
chr7:101206008|101206286 hsa-miR-4755-3p 0 1 0
chr7:101206008|101206286 hsa-miR-24-3p 1 0 0
chr7:101206008|101206286 hsa-miR-6727-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6721-5p 1 0 0
chr7:101206008|101206286 hsa-miR-197-5p 1 0 0
chr7:101206008|101206286 hsa-miR-3180-3p 1 1 0
chr7:101206008|101206286 hsa-miR-6805-5p 1 0 0
chr7:101206008|101206286 hsa-miR-2467-3p 1 0 0
chr7:101206008|101206286 hsa-miR-3150b-3p 0 1 0
chr7:101206008|101206286 hsa-miR-6810-5p 1 0 0
chr7:101206008|101206286 hsa-miR-5006-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6850-5p 1 1 0
chr7:101206008|101206286 hsa-miR-6786-5p 1 0 0
chr7:101206008|101206286 hsa-miR-5088-5p 1 0 0
chr7:101206008|101206286 hsa-miR-7109-5p 1 0 0
chr7:101206008|101206286 hsa-miR-1229-5p 1 0 0
chr7:101206008|101206286 hsa-miR-4640-5p 1 0 0
chr7:101206008|101206286 hsa-miR-1908-5p 1 1 0
chr7:101206008|101206286 hsa-miR-1228-5p 1 1 0
chr7:101206008|101206286 hsa-miR-6823-5p 1 0 0
chr7:101206008|101206286 hsa-miR-4732-5p 1 0 0
chr7:101206008|101206286 hsa-miR-4446-3p 1 0 0
chr7:101206008|101206286 hsa-miR-149-3p 1 0 0
chr7:101206008|101206286 hsa-miR-6824-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6800-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6781-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6877-5p 1 0 0
chr7:101206008|101206286 hsa-miR-7112-5p 1 0 0
chr7:101206008|101206286 hsa-miR-887-5p 0 1 0
chr7:101206008|101206286 hsa-miR-6889-3p 0 1 0
chr7:101206008|101206286 hsa-miR-6793-3p 0 1 0
chr7:101206008|101206286 hsa-miR-744-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6832-5p 1 0 0
chr7:101206008|101206286 hsa-miR-34a-5p 1 0 0
chr7:101206008|101206286 hsa-miR-1914-5p 0 1 0
chr7:101206008|101206286 hsa-miR-6761-5p 0 1 0
chr7:101206008|101206286 hsa-miR-3664-3p 0 1 0
chr7:101206008|101206286 hsa-miR-6779-3p 0 1 0
chr7:101206008|101206286 hsa-miR-6729-3p 0 1 0
chr7:101206008|101206286 hsa-miR-3186-3p 0 1 0
chr7:101206008|101206286 hsa-miR-124-3p 1 1 0
chr7:101206008|101206286 hsa-miR-1233-5p 1 0 0
chr7:101206008|101206286 hsa-miR-4763-3p 1 1 0
chr7:101206008|101206286 hsa-miR-6769b-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6778-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6787-5p 1 1 0
chr7:101206008|101206286 hsa-miR-6893-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6775-5p 1 0 0
chr7:101206008|101206286 hsa-miR-1343-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6726-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6743-5p 1 0 0
chr7:101206008|101206286 hsa-miR-11181-3p 0 1 0
chr7:101206008|101206286 hsa-miR-1249-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6722-3p 1 0 0
chr7:101206008|101206286 hsa-miR-6779-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6808-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6879-5p 1 1 0
chr7:101206008|101206286 hsa-miR-7111-5p 0 1 0
chr7:101206008|101206286 hsa-miR-4728-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6780b-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6836-5p 1 0 0
chr7:101206008|101206286 hsa-miR-10396a-5p 1 0 0
chr7:101206008|101206286 hsa-miR-10396b-5p 1 1 0
chr7:101206008|101206286 hsa-miR-1237-5p 1 0 0
chr7:101206008|101206286 hsa-miR-1909-3p 1 0 0
chr7:101206008|101206286 hsa-miR-328-5p 1 0 0
chr7:101206008|101206286 hsa-miR-3689a-3p 1 0 0
chr7:101206008|101206286 hsa-miR-4632-5p 1 1 0
chr7:101206008|101206286 hsa-miR-4649-5p 1 0 0
chr7:101206008|101206286 hsa-miR-4725-3p 1 0 0
chr7:101206008|101206286 hsa-miR-4726-5p 0 1 0
chr7:101206008|101206286 hsa-miR-4745-5p 1 0 0
chr7:101206008|101206286 hsa-miR-4749-5p 0 1 0
chr7:101206008|101206286 hsa-miR-6735-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6777-5p 0 1 0
chr7:101206008|101206286 hsa-miR-6848-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6883-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6887-5p 0 1 0
chr7:101206008|101206286 hsa-miR-6889-5p 0 1 0
chr7:101206008|101206286 hsa-miR-3187-5p 1 0 0
chr7:101206008|101206286 hsa-miR-4436b-3p 1 0 0
chr7:101206008|101206286 hsa-miR-6831-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6511a-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6511b-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6785-5p 1 0 0
chr7:101206008|101206286 hsa-miR-6529-3p 0 1 0
chr7:101206008|101206286 hsa-miR-6859-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:101206008|101206286
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MPNLPCHCAFLGGLAPVLGVGGWVSLSPHFLSSCSACLN
Nucleotide Sequence CTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGGGGGCCTGGCCCCCGTCCTGGGAGTTGGGGGATGGGTCTCTCTGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGA
CircID chr7:101206008|101206286
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MLPRHGPLRKLPESPPLSSAHRGSWAQGFWGLPA
Nucleotide Sequence TTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGA
CircID chr7:101206008|101206286
ORF Type ORF3
Protein Length 92
Nucleotide Length 276
Protein Sequence LTLNHSAKPALPLCLFRGPGPRPGSWGMGLSVSPLPEFMFRVPELNMSPCSQDTALSGSSRSPRLSPPPTGVRGHRASGDSPRDKLLMFRSL
Nucleotide Sequence CTGACACTCAACCACTCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGGGGGCCTGGCCCCCGTCCTGGGAGTTGGGGGATGGGTCTCTCTGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCTC
CircID chr7:101206008|101206286
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MWAEERGGDSGSFLRGPCLGSKVTYSVQARGT
Nucleotide Sequence CTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGA
CircID chr7:101206008|101206286
ORF Type ORF5
Protein Length 91
Nucleotide Length 273
Protein Sequence MRNINNLSRGESPEALCPRTPVGGGERRGLRELPERAVSWEQGDIFSSGTRNMNSGSGETERPIPQLPGRGPGPLKRHNGRAGLAEWLSVR
Nucleotide Sequence CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGACAGAGAGACCCATCCCCCAACTCCCAGGACGGGGGCCAGGCCCCCTAAAAAGGCACAATGGCAGGGCAGGTTTGGCAGAGTGGTTGAGTGTCAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab