CircRNA Information

General Information
circRNA Basic Information
CircID chr7:101211617|101211934
Strand -
CircType exon
Host Gene ENSG00000106397.10;
Algorism CIRI2;
Sequence GTAGTCCTCGGAGCGGGCGTAGTACTCATCGGGGCTCAGGGCGCCCCAGAAGTTGGACCACAGCTTGCCGTGGCGGGACAGCATGGGGGCGATCACCTTCCTGCGGACAGGTGGGGGTGAGGGCTGGGCAGACGGGAGCAGGCCTGGGGAGCCCGGTGCCCAGGGCAGGAGTGGGGTTCCCGGGGCCTGTTGGGGTGCCCTCCGGCTGCGGGGAGAGGGGGTAAGCCACCTGTTCTCCTCAATGAGGATACGCAGGGTCTGCAGGTTGGTGAGGACAGCGTCGGCGTCCAGGCTGAAGTAGAACTCACACTCGGGGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:101211617|101211934 hsa-miR-346 1 1 1
chr7:101211617|101211934 hsa-miR-504-5p 0 0 1
chr7:101211617|101211934 hsa-miR-504-3p 0 0 1
chr7:101211617|101211934 hsa-miR-552-5p 0 0 1
chr7:101211617|101211934 hsa-miR-552-3p 0 0 1
chr7:101211617|101211934 hsa-miR-611 0 0 1
chr7:101211617|101211934 hsa-miR-612 0 1 1
chr7:101211617|101211934 hsa-miR-626 0 0 1
chr7:101211617|101211934 hsa-miR-637 1 0 1
chr7:101211617|101211934 hsa-miR-874-5p 0 0 1
chr7:101211617|101211934 hsa-miR-874-3p 0 0 1
chr7:101211617|101211934 hsa-miR-1247-5p 0 0 1
chr7:101211617|101211934 hsa-miR-1247-3p 0 0 1
chr7:101211617|101211934 hsa-miR-1225-3p 1 1 1
chr7:101211617|101211934 hsa-miR-1224-5p 0 0 1
chr7:101211617|101211934 hsa-miR-146b-3p 0 0 1
chr7:101211617|101211934 hsa-miR-574-5p 0 0 1
chr7:101211617|101211934 hsa-miR-1224-3p 0 0 1
chr7:101211617|101211934 hsa-miR-324-3p 0 0 1
chr7:101211617|101211934 hsa-miR-125a-5p 0 1 1
chr7:101211617|101211934 hsa-miR-483-3p 0 1 1
chr7:101211617|101211934 hsa-miR-1233 0 0 1
chr7:101211617|101211934 hsa-miR-125b 0 0 1
chr7:101211617|101211934 hsa-miR-1285 0 0 1
chr7:101211617|101211934 hsa-miR-1254 0 0 1
chr7:101211617|101211934 hsa-miR-636 1 0 0
chr7:101211617|101211934 hsa-miR-661 0 1 0
chr7:101211617|101211934 hsa-miR-1471 1 0 0
chr7:101211617|101211934 hsa-miR-1913 1 0 0
chr7:101211617|101211934 hsa-miR-1976 0 1 0
chr7:101211617|101211934 hsa-miR-3168 0 1 0
chr7:101211617|101211934 hsa-miR-3193 1 1 0
chr7:101211617|101211934 hsa-miR-3196 1 0 0
chr7:101211617|101211934 hsa-miR-4313 1 0 0
chr7:101211617|101211934 hsa-miR-4258 0 1 0
chr7:101211617|101211934 hsa-miR-4286 0 1 0
chr7:101211617|101211934 hsa-miR-4292 0 1 0
chr7:101211617|101211934 hsa-miR-3943 1 0 0
chr7:101211617|101211934 hsa-miR-4421 0 1 0
chr7:101211617|101211934 hsa-miR-4682 0 1 0
chr7:101211617|101211934 hsa-miR-4689 0 1 0
chr7:101211617|101211934 hsa-miR-4767 1 0 0
chr7:101211617|101211934 hsa-miR-5691 0 1 0
chr7:101211617|101211934 hsa-miR-6072 0 1 0
chr7:101211617|101211934 hsa-miR-6860 0 1 0
chr7:101211617|101211934 hsa-miR-8089 1 0 0
chr7:101211617|101211934 hsa-miR-9899 1 1 0
chr7:101211617|101211934 hsa-miR-9901 1 0 0
chr7:101211617|101211934 hsa-miR-9903 0 1 0
chr7:101211617|101211934 hsa-miR-6892-3p 0 1 0
chr7:101211617|101211934 hsa-miR-3189-5p 0 1 0
chr7:101211617|101211934 hsa-miR-4728-3p 1 0 0
chr7:101211617|101211934 hsa-miR-4725-5p 0 1 0
chr7:101211617|101211934 hsa-miR-939-3p 1 1 0
chr7:101211617|101211934 hsa-miR-4763-5p 1 0 0
chr7:101211617|101211934 hsa-miR-6763-3p 1 0 0
chr7:101211617|101211934 hsa-miR-1909-5p 1 0 0
chr7:101211617|101211934 hsa-miR-3944-3p 0 1 0
chr7:101211617|101211934 hsa-miR-3690 0 1 0
chr7:101211617|101211934 hsa-miR-3616-3p 0 1 0
chr7:101211617|101211934 hsa-miR-6789-5p 1 0 0
chr7:101211617|101211934 hsa-miR-4640-3p 0 1 0
chr7:101211617|101211934 hsa-miR-6786-3p 1 0 0
chr7:101211617|101211934 hsa-miR-6886-5p 0 1 0
chr7:101211617|101211934 hsa-miR-6870-3p 0 1 0
chr7:101211617|101211934 hsa-miR-4687-5p 0 1 0
chr7:101211617|101211934 hsa-miR-3614-3p 1 0 0
chr7:101211617|101211934 hsa-miR-6872-3p 1 0 0
chr7:101211617|101211934 hsa-miR-6865-3p 1 0 0
chr7:101211617|101211934 hsa-miR-1914-5p 1 0 0
chr7:101211617|101211934 hsa-miR-5088-3p 1 0 0
chr7:101211617|101211934 hsa-miR-6738-3p 0 1 0
chr7:101211617|101211934 hsa-miR-1229-3p 0 1 0
chr7:101211617|101211934 hsa-miR-6798-3p 0 1 0
chr7:101211617|101211934 hsa-miR-6789-3p 0 1 0
chr7:101211617|101211934 hsa-miR-4650-5p 0 1 0
chr7:101211617|101211934 hsa-miR-6754-3p 0 1 0
chr7:101211617|101211934 hsa-miR-5189-5p 0 1 0
chr7:101211617|101211934 hsa-miR-6858-5p 0 1 0
chr7:101211617|101211934 hsa-miR-3187-5p 0 1 0
chr7:101211617|101211934 hsa-miR-10396a-3p 1 1 0
chr7:101211617|101211934 hsa-miR-10396b-3p 1 1 0
chr7:101211617|101211934 hsa-miR-1199-5p 1 0 0
chr7:101211617|101211934 hsa-miR-6791-3p 1 0 0
chr7:101211617|101211934 hsa-miR-10398-5p 0 1 0
chr7:101211617|101211934 hsa-miR-6791-5p 0 1 0
chr7:101211617|101211934 hsa-miR-6511a-3p 0 1 0
chr7:101211617|101211934 hsa-miR-6784-3p 0 1 0
chr7:101211617|101211934 hsa-miR-6862-3p 0 1 0
chr7:101211617|101211934 hsa-miR-6805-3p 1 0 0
chr7:101211617|101211934 hsa-miR-6511b-3p 0 1 0
chr7:101211617|101211934 hsa-miR-10394-5p 1 1 0
chr7:101211617|101211934 hsa-miR-129-1-3p 0 1 0
chr7:101211617|101211934 hsa-miR-129-2-3p 0 1 0
chr7:101211617|101211934 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:101211617|101211934
ORF Type ORF1
Protein Length 65
Nucleotide Length 195
Protein Sequence MGRREQAWGARCPGQEWGSRGLLGCPPAAGRGGKPPVLLNEDTQGLQVGEDSVGVQAEVELTLGV
Nucleotide Sequence CTGGGCAGACGGGAGCAGGCCTGGGGAGCCCGGTGCCCAGGGCAGGAGTGGGGTTCCCGGGGCCTGTTGGGGTGCCCTCCGGCTGCGGGGAGAGGGGGTAAGCCACCTGTTCTCCTCAATGAGGATACGCAGGGTCTGCAGGTTGGTGAGGACAGCGTCGGCGTCCAGGCTGAAGTAGAACTCACACTCGGGGTC

CircID chr7:101211617|101211934
ORF Type ORF2
Protein Length 82
Nucleotide Length 249
Protein Sequence MDHSLPWRDSMGAITFLRTGGGEGWADGSRPGEPGAQGRSGVPGACWGALRLRGEGVSHLFSSMRIRRVCRLVRTASASRLK
Nucleotide Sequence TTGGACCACAGCTTGCCGTGGCGGGACAGCATGGGGGCGATCACCTTCCTGCGGACAGGTGGGGGTGAGGGCTGGGCAGACGGGAGCAGGCCTGGGGAGCCCGGTGCCCAGGGCAGGAGTGGGGTTCCCGGGGCCTGTTGGGGTGCCCTCCGGCTGCGGGGAGAGGGGGTAAGCCACCTGTTCTCCTCAATGAGGATACGCAGGGTCTGCAGGTTGGTGAGGACAGCGTCGGCGTCCAGGCTGAAGTAG

CircID chr7:101211617|101211934
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MGSPVPRAGVGFPGPVGVPSGCGERG
Nucleotide Sequence CTGGGGAGCCCGGTGCCCAGGGCAGGAGTGGGGTTCCCGGGGCCTGTTGGGGTGCCCTCCGGCTGCGGGGAGAGGGGGTAA

CircID chr7:101211617|101211934
ORF Type ORF4
Protein Length 97
Nucleotide Length 291
Protein Sequence MDADAVLTNLQTLRILIEENRWLTPSPRSRRAPQQAPGTPLLPWAPGSPGLLPSAQPSPPPVRRKVIAPMLSRHGKLWSNFWGALSPDEYYARSEDY
Nucleotide Sequence CTGGACGCCGACGCTGTCCTCACCAACCTGCAGACCCTGCGTATCCTCATTGAGGAGAACAGGTGGCTTACCCCCTCTCCCCGCAGCCGGAGGGCACCCCAACAGGCCCCGGGAACCCCACTCCTGCCCTGGGCACCGGGCTCCCCAGGCCTGCTCCCGTCTGCCCAGCCCTCACCCCCACCTGTCCGCAGGAAGGTGATCGCCCCCATGCTGTCCCGCCACGGCAAGCTGTGGTCCAACTTCTGGGGCGCCCTGAGCCCCGATGAGTACTACGCCCGCTCCGAGGACTAC

CircID chr7:101211617|101211934
ORF Type ORF5
Protein Length 61
Nucleotide Length 186
Protein Sequence MSSPTCRPCVSSLRRTGGLPPLPAAGGHPNRPREPHSCPGHRAPQACSRLPSPHPHLSAGR
Nucleotide Sequence CTGTCCTCACCAACCTGCAGACCCTGCGTATCCTCATTGAGGAGAACAGGTGGCTTACCCCCTCTCCCCGCAGCCGGAGGGCACCCCAACAGGCCCCGGGAACCCCACTCCTGCCCTGGGCACCGGGCTCCCCAGGCCTGCTCCCGTCTGCCCAGCCCTCACCCCCACCTGTCCGCAGGAAGGTGA

CircID chr7:101211617|101211934
ORF Type ORF6
Protein Length 45
Nucleotide Length 138
Protein Sequence MGTGLPRPAPVCPALTPTCPQEGDRPHAVPPRQAVVQLLGRPEPR
Nucleotide Sequence CTGGGCACCGGGCTCCCCAGGCCTGCTCCCGTCTGCCCAGCCCTCACCCCCACCTGTCCGCAGGAAGGTGATCGCCCCCATGCTGTCCCGCCACGGCAAGCTGTGGTCCAACTTCTGGGGCGCCCTGAGCCCCGATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites