CircRNA Information

General Information
circRNA Basic Information
CircID chr7:101212842|101213187
Strand -
CircType exon
Host Gene ENSG00000106397.10;
Algorism CIRI2;
Sequence CTGCCCCCCCGGGAGTGTCCTCCGGTCCTGGTTGCAGAAGCCACAGCCTCCCTCAGGAGTCCAGCCATTGGGGACGTAGTTTCCCAGGTAGTTGAGCTGCAGCTGTTGGGGACAGACTGAGGCTGAGTGGCTGAGGCCTCCAGGGGTGGAGGTGGGGGTCAGGCACCTCTGATATGGGGGCTGGGAAGGGCCAGCTTCTCAGAAGGGTTGGAGGTGCCTGGGGGTTGGGGCAGGGCGGGGCGGGGGTTGAGACCACTGGTGGCACCTTAGTGGGACCGTTTCCATGGACCACAATGGGGAGCGTGTCGTAGGCCACGTTCCGGATACGCACACGGTTCCGATCAAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:101212842|101213187 hsa-miR-18a-5p 0 0 1
chr7:101212842|101213187 hsa-miR-18a-3p 0 0 1
chr7:101212842|101213187 hsa-miR-210-5p 0 0 1
chr7:101212842|101213187 hsa-miR-210-3p 0 0 1
chr7:101212842|101213187 hsa-miR-328-5p 0 0 1
chr7:101212842|101213187 hsa-miR-328-3p 0 0 1
chr7:101212842|101213187 hsa-miR-422a 0 0 1
chr7:101212842|101213187 hsa-miR-18b-5p 0 0 1
chr7:101212842|101213187 hsa-miR-18b-3p 0 0 1
chr7:101212842|101213187 hsa-miR-553 0 0 1
chr7:101212842|101213187 hsa-miR-619-5p 0 0 1
chr7:101212842|101213187 hsa-miR-619-3p 0 0 1
chr7:101212842|101213187 hsa-miR-622 0 0 1
chr7:101212842|101213187 hsa-miR-650 0 0 1
chr7:101212842|101213187 hsa-miR-1301-5p 0 0 1
chr7:101212842|101213187 hsa-miR-1301-3p 0 0 1
chr7:101212842|101213187 hsa-miR-1227-5p 0 0 1
chr7:101212842|101213187 hsa-miR-1227-3p 0 0 1
chr7:101212842|101213187 hsa-miR-1237-5p 0 0 1
chr7:101212842|101213187 hsa-miR-1237-3p 0 0 1
chr7:101212842|101213187 hsa-miR-1200 0 1 1
chr7:101212842|101213187 hsa-miR-1204 0 1 1
chr7:101212842|101213187 hsa-miR-1291 0 0 1
chr7:101212842|101213187 hsa-miR-1253 0 0 1
chr7:101212842|101213187 hsa-miR-1321 0 0 1
chr7:101212842|101213187 hsa-miR-1197 0 0 1
chr7:101212842|101213187 hsa-miR-512-5p 0 1 1
chr7:101212842|101213187 hsa-miR-486-3p 0 0 1
chr7:101212842|101213187 hsa-miR-485-5p 0 0 1
chr7:101212842|101213187 hsa-miR-361-5p 0 0 1
chr7:101212842|101213187 hsa-miR-1184 0 0 1
chr7:101212842|101213187 hsa-miR-361-3p 0 1 1
chr7:101212842|101213187 hsa-miR-1224-3p 1 1 1
chr7:101212842|101213187 hsa-miR-331-3p 0 1 1
chr7:101212842|101213187 hsa-miR-324-3p 1 0 1
chr7:101212842|101213187 hsa-miR-550 0 0 1
chr7:101212842|101213187 hsa-miR-378 0 0 1
chr7:101212842|101213187 hsa-miR-1300 0 0 1
chr7:101212842|101213187 hsa-miR-544 0 0 1
chr7:101212842|101213187 hsa-miR-1201 0 0 1
chr7:101212842|101213187 hsa-miR-1826 0 0 1
chr7:101212842|101213187 hsa-miR-484 1 0 0
chr7:101212842|101213187 hsa-miR-637 0 1 0
chr7:101212842|101213187 hsa-miR-762 1 0 0
chr7:101212842|101213187 hsa-miR-1260a 1 0 0
chr7:101212842|101213187 hsa-miR-1470 1 0 0
chr7:101212842|101213187 hsa-miR-1913 1 0 0
chr7:101212842|101213187 hsa-miR-378b 0 1 0
chr7:101212842|101213187 hsa-miR-4258 1 0 0
chr7:101212842|101213187 hsa-miR-4251 0 1 0
chr7:101212842|101213187 hsa-miR-4254 0 1 0
chr7:101212842|101213187 hsa-miR-4269 0 1 0
chr7:101212842|101213187 hsa-miR-3652 0 1 0
chr7:101212842|101213187 hsa-miR-3943 1 1 0
chr7:101212842|101213187 hsa-miR-4515 1 0 0
chr7:101212842|101213187 hsa-miR-4669 0 1 0
chr7:101212842|101213187 hsa-miR-4739 1 0 0
chr7:101212842|101213187 hsa-miR-4741 1 0 0
chr7:101212842|101213187 hsa-miR-6127 0 1 0
chr7:101212842|101213187 hsa-miR-6133 0 1 0
chr7:101212842|101213187 hsa-miR-6749-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6825-5p 1 1 0
chr7:101212842|101213187 hsa-miR-6720-5p 1 0 0
chr7:101212842|101213187 hsa-miR-766-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6892-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6799-5p 1 0 0
chr7:101212842|101213187 hsa-miR-7851-3p 1 1 0
chr7:101212842|101213187 hsa-miR-7154-3p 0 1 0
chr7:101212842|101213187 hsa-miR-6840-5p 1 0 0
chr7:101212842|101213187 hsa-miR-6842-3p 0 1 0
chr7:101212842|101213187 hsa-miR-3189-5p 1 0 0
chr7:101212842|101213187 hsa-miR-6787-3p 0 1 0
chr7:101212842|101213187 hsa-miR-659-3p 1 0 0
chr7:101212842|101213187 hsa-miR-3180-3p 1 0 0
chr7:101212842|101213187 hsa-miR-1226-5p 1 0 0
chr7:101212842|101213187 hsa-miR-4763-5p 1 0 0
chr7:101212842|101213187 hsa-miR-6763-3p 1 0 0
chr7:101212842|101213187 hsa-miR-7108-3p 1 1 0
chr7:101212842|101213187 hsa-miR-1247-5p 1 1 0
chr7:101212842|101213187 hsa-miR-4707-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6803-3p 1 0 0
chr7:101212842|101213187 hsa-miR-4691-3p 0 1 0
chr7:101212842|101213187 hsa-miR-7113-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6834-5p 0 1 0
chr7:101212842|101213187 hsa-miR-6824-5p 1 0 0
chr7:101212842|101213187 hsa-miR-4640-3p 1 0 0
chr7:101212842|101213187 hsa-miR-7156-3p 1 0 0
chr7:101212842|101213187 hsa-miR-1306-5p 0 1 0
chr7:101212842|101213187 hsa-miR-6781-5p 1 0 0
chr7:101212842|101213187 hsa-miR-1226-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6785-3p 1 0 0
chr7:101212842|101213187 hsa-miR-4732-3p 1 0 0
chr7:101212842|101213187 hsa-miR-4758-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6793-3p 0 1 0
chr7:101212842|101213187 hsa-miR-6752-3p 1 1 0
chr7:101212842|101213187 hsa-miR-6746-3p 1 0 0
chr7:101212842|101213187 hsa-miR-7848-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6886-3p 0 1 0
chr7:101212842|101213187 hsa-miR-4749-3p 1 1 0
chr7:101212842|101213187 hsa-miR-6859-3p 1 1 0
chr7:101212842|101213187 hsa-miR-1292-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6851-3p 0 1 0
chr7:101212842|101213187 hsa-miR-3620-3p 1 0 0
chr7:101212842|101213187 hsa-miR-4433a-5p 1 0 0
chr7:101212842|101213187 hsa-miR-4750-3p 0 1 0
chr7:101212842|101213187 hsa-miR-3173-5p 1 1 0
chr7:101212842|101213187 hsa-miR-6798-3p 1 1 0
chr7:101212842|101213187 hsa-miR-6734-3p 0 1 0
chr7:101212842|101213187 hsa-miR-1249-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6729-3p 1 0 0
chr7:101212842|101213187 hsa-miR-7158-5p 1 0 0
chr7:101212842|101213187 hsa-miR-3162-3p 1 0 0
chr7:101212842|101213187 hsa-miR-1233-5p 1 0 0
chr7:101212842|101213187 hsa-miR-5001-5p 1 0 0
chr7:101212842|101213187 hsa-miR-6752-5p 1 0 0
chr7:101212842|101213187 hsa-miR-6754-5p 1 0 0
chr7:101212842|101213187 hsa-miR-6875-5p 1 0 0
chr7:101212842|101213187 hsa-miR-4685-5p 1 0 0
chr7:101212842|101213187 hsa-miR-4726-5p 1 0 0
chr7:101212842|101213187 hsa-miR-939-5p 1 0 0
chr7:101212842|101213187 hsa-miR-3085-5p 0 1 0
chr7:101212842|101213187 hsa-miR-10396a-3p 1 0 0
chr7:101212842|101213187 hsa-miR-10396b-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6799-3p 1 1 0
chr7:101212842|101213187 hsa-miR-6756-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6784-3p 1 0 0
chr7:101212842|101213187 hsa-miR-10401-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6801-3p 1 0 0
chr7:101212842|101213187 hsa-miR-6810-3p 1 1 0
chr7:101212842|101213187 hsa-miR-10400-3p 0 1 0
chr7:101212842|101213187 hsa-miR-10392-3p 1 0 0
chr7:101212842|101213187 hsa-miR-11181-5p 0 1 0
chr7:101212842|101213187 hsa-miR-6512-3p 0 1 0
chr7:101212842|101213187 hsa-miR-4756-5p 0 1 0
chr7:101212842|101213187 hsa-miR-6848-3p 1 1 0
chr7:101212842|101213187 hsa-miR-5588-3p 0 1 0
chr7:101212842|101213187 hsa-miR-203b-5p 0 1 0
chr7:101212842|101213187 hsa-miR-6506-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:101212842|101213187
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence LPPRECPPVLVAEATASLRSPAIGDVVSQVVELQLLGTD
Nucleotide Sequence CTGCCCCCCCGGGAGTGTCCTCCGGTCCTGGTTGCAGAAGCCACAGCCTCCCTCAGGAGTCCAGCCATTGGGGACGTAGTTTCCCAGGTAGTTGAGCTGCAGCTGTTGGGGACAGACTGA
CircID chr7:101212842|101213187
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MIWGLGRASFSEGLEVPGGWGRAGRGLRPLVAP
Nucleotide Sequence CTGATATGGGGGCTGGGAAGGGCCAGCTTCTCAGAAGGGTTGGAGGTGCCTGGGGGTTGGGGCAGGGCGGGGCGGGGGTTGAGACCACTGGTGGCACCTTAG
CircID chr7:101212842|101213187
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MSCSCWGQTEAEWLRPPGVEVGVRHL
Nucleotide Sequence TTGAGCTGCAGCTGTTGGGGACAGACTGAGGCTGAGTGGCTGAGGCCTCCAGGGGTGGAGGTGGGGGTCAGGCACCTCTGA
CircID chr7:101212842|101213187
ORF Type ORF4
Protein Length 45
Nucleotide Length 138
Protein Sequence MGAGKGQLLRRVGGAWGLGQGGAGVETTGGTLVGPFPWTTMGSVS
Nucleotide Sequence ATGGGGGCTGGGAAGGGCCAGCTTCTCAGAAGGGTTGGAGGTGCCTGGGGGTTGGGGCAGGGCGGGGCGGGGGTTGAGACCACTGGTGGCACCTTAGTGGGACCGTTTCCATGGACCACAATGGGGAGCGTGTCGTAG
CircID chr7:101212842|101213187
ORF Type ORF5
Protein Length 49
Nucleotide Length 150
Protein Sequence MRSWPFPAPISEVPDPHLHPWRPQPLSLSLSPTAAAQLPGKLRPQWLDS
Nucleotide Sequence CTGAGAAGCTGGCCCTTCCCAGCCCCCATATCAGAGGTGCCTGACCCCCACCTCCACCCCTGGAGGCCTCAGCCACTCAGCCTCAGTCTGTCCCCAACAGCTGCAGCTCAACTACCTGGGAAACTACGTCCCCAATGGCTGGACTCCTGA
CircID chr7:101212842|101213187
ORF Type ORF6
Protein Length 48
Nucleotide Length 147
Protein Sequence LIGTVCVSGTWPTTRSPLWSMETVPLRCHQWSQPPPRPAPTPRHLQPF
Nucleotide Sequence TTGATCGGAACCGTGTGCGTATCCGGAACGTGGCCTACGACACGCTCCCCATTGTGGTCCATGGAAACGGTCCCACTAAGGTGCCACCAGTGGTCTCAACCCCCGCCCCGCCCTGCCCCAACCCCCAGGCACCTCCAACCCTTCTGA
CircID chr7:101212842|101213187
ORF Type ORF7
Protein Length 54
Nucleotide Length 162
Protein Sequence MTPTSTPGGLSHSASVCPQQLQLNYLGNYVPNGWTPEGGCGFCNQDRRTLPGGQ
Nucleotide Sequence CTGACCCCCACCTCCACCCCTGGAGGCCTCAGCCACTCAGCCTCAGTCTGTCCCCAACAGCTGCAGCTCAACTACCTGGGAAACTACGTCCCCAATGGCTGGACTCCTGAGGGAGGCTGTGGCTTCTGCAACCAGGACCGGAGGACACTCCCGGGGGGGCAG
CircID chr7:101212842|101213187
ORF Type ORF8
Protein Length 47
Nucleotide Length 141
Protein Sequence MEASATQPQSVPNSCSSTTWETTSPMAGLLREAVASATRTGGHSRGG
Nucleotide Sequence CTGGAGGCCTCAGCCACTCAGCCTCAGTCTGTCCCCAACAGCTGCAGCTCAACTACCTGGGAAACTACGTCCCCAATGGCTGGACTCCTGAGGGAGGCTGTGGCTTCTGCAACCAGGACCGGAGGACACTCCCGGGGGGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab