CircRNA Information

General Information
circRNA Basic Information
CircID chr7:102450449|102450768
Strand -
CircType exon
Host Gene ENSG00000160991.14;
Algorism CIRI2;
Sequence GCATCTCCAGTGCCATCTGGGGGCCAGTTACTGTACCTGGTCCCCAGGCAGAGCTCTTGGCCTGGCAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCTCTGATTAGGAGGATGACAGTCTTGGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTTCTAGTTTCGAGGCATGAGGCAAACCATTGCTGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCTCAGGGTCACCCCAGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:102450449|102450768 hsa-miR-183-5p 0 0 1
chr7:102450449|102450768 hsa-miR-183-3p 0 0 1
chr7:102450449|102450768 hsa-miR-144-5p 0 0 1
chr7:102450449|102450768 hsa-miR-144-3p 0 0 1
chr7:102450449|102450768 hsa-miR-328-5p 0 0 1
chr7:102450449|102450768 hsa-miR-328-3p 0 0 1
chr7:102450449|102450768 hsa-miR-326 0 0 1
chr7:102450449|102450768 hsa-miR-335-5p 0 0 1
chr7:102450449|102450768 hsa-miR-335-3p 0 0 1
chr7:102450449|102450768 hsa-miR-193b-5p 0 0 1
chr7:102450449|102450768 hsa-miR-193b-3p 0 0 1
chr7:102450449|102450768 hsa-miR-504-5p 0 0 1
chr7:102450449|102450768 hsa-miR-504-3p 0 0 1
chr7:102450449|102450768 hsa-miR-589-5p 0 0 1
chr7:102450449|102450768 hsa-miR-589-3p 0 0 1
chr7:102450449|102450768 hsa-miR-608 0 0 1
chr7:102450449|102450768 hsa-miR-612 1 0 1
chr7:102450449|102450768 hsa-miR-620 0 0 1
chr7:102450449|102450768 hsa-miR-637 1 0 1
chr7:102450449|102450768 hsa-miR-661 0 0 1
chr7:102450449|102450768 hsa-miR-655-5p 0 0 1
chr7:102450449|102450768 hsa-miR-655-3p 0 0 1
chr7:102450449|102450768 hsa-miR-890 0 0 1
chr7:102450449|102450768 hsa-miR-1227-5p 0 0 1
chr7:102450449|102450768 hsa-miR-1227-3p 0 0 1
chr7:102450449|102450768 hsa-miR-1238-5p 0 0 1
chr7:102450449|102450768 hsa-miR-1238-3p 0 0 1
chr7:102450449|102450768 hsa-miR-1291 0 0 1
chr7:102450449|102450768 hsa-miR-1270 0 0 1
chr7:102450449|102450768 hsa-miR-361-3p 0 1 1
chr7:102450449|102450768 hsa-miR-188-3p 1 1 1
chr7:102450449|102450768 hsa-miR-455-5p 0 0 1
chr7:102450449|102450768 hsa-miR-342-5p 0 0 1
chr7:102450449|102450768 hsa-miR-125a-5p 0 0 1
chr7:102450449|102450768 hsa-miR-330-5p 0 1 1
chr7:102450449|102450768 hsa-miR-582-3p 0 0 1
chr7:102450449|102450768 hsa-miR-193a-3p 0 1 1
chr7:102450449|102450768 hsa-miR-1260 0 0 1
chr7:102450449|102450768 hsa-miR-125b 0 0 1
chr7:102450449|102450768 hsa-miR-1285 0 0 1
chr7:102450449|102450768 hsa-miR-1254 0 0 1
chr7:102450449|102450768 hsa-miR-101 0 0 1
chr7:102450449|102450768 hsa-miR-762 1 0 0
chr7:102450449|102450768 hsa-miR-544b 0 1 0
chr7:102450449|102450768 hsa-miR-3153 0 1 0
chr7:102450449|102450768 hsa-miR-3154 1 1 0
chr7:102450449|102450768 hsa-miR-3652 1 1 0
chr7:102450449|102450768 hsa-miR-4430 0 1 0
chr7:102450449|102450768 hsa-miR-3135b 0 1 0
chr7:102450449|102450768 hsa-miR-4487 0 1 0
chr7:102450449|102450768 hsa-miR-4505 1 0 0
chr7:102450449|102450768 hsa-miR-1587 1 0 0
chr7:102450449|102450768 hsa-miR-4538 1 0 0
chr7:102450449|102450768 hsa-miR-4644 0 1 0
chr7:102450449|102450768 hsa-miR-5787 1 1 0
chr7:102450449|102450768 hsa-miR-6085 1 0 0
chr7:102450449|102450768 hsa-miR-6125 1 0 0
chr7:102450449|102450768 hsa-miR-8082 1 0 0
chr7:102450449|102450768 hsa-miR-8089 0 1 0
chr7:102450449|102450768 hsa-miR-22-3p 0 1 0
chr7:102450449|102450768 hsa-miR-149-5p 0 1 0
chr7:102450449|102450768 hsa-miR-3150a-3p 0 1 0
chr7:102450449|102450768 hsa-miR-7106-5p 1 0 0
chr7:102450449|102450768 hsa-miR-1972 0 1 0
chr7:102450449|102450768 hsa-miR-6089 1 0 0
chr7:102450449|102450768 hsa-miR-3189-5p 1 0 0
chr7:102450449|102450768 hsa-miR-1915-5p 1 0 0
chr7:102450449|102450768 hsa-miR-4725-5p 0 1 0
chr7:102450449|102450768 hsa-miR-6874-5p 0 1 0
chr7:102450449|102450768 hsa-miR-6810-5p 0 1 0
chr7:102450449|102450768 hsa-miR-5006-5p 0 1 0
chr7:102450449|102450768 hsa-miR-6852-5p 0 1 0
chr7:102450449|102450768 hsa-miR-4738-3p 0 1 0
chr7:102450449|102450768 hsa-miR-4715-3p 0 1 0
chr7:102450449|102450768 hsa-miR-5001-3p 0 1 0
chr7:102450449|102450768 hsa-miR-652-5p 1 1 0
chr7:102450449|102450768 hsa-miR-532-5p 0 1 0
chr7:102450449|102450768 hsa-miR-6800-3p 1 0 0
chr7:102450449|102450768 hsa-miR-4763-3p 1 0 0
chr7:102450449|102450768 hsa-miR-6812-5p 0 1 0
chr7:102450449|102450768 hsa-miR-5001-5p 0 1 0
chr7:102450449|102450768 hsa-miR-6756-5p 1 0 0
chr7:102450449|102450768 hsa-miR-6815-5p 0 1 0
chr7:102450449|102450768 hsa-miR-6788-5p 0 1 0
chr7:102450449|102450768 hsa-miR-3620-5p 1 0 0
chr7:102450449|102450768 hsa-miR-10392-5p 1 0 0
chr7:102450449|102450768 hsa-miR-6848-5p 1 0 0
chr7:102450449|102450768 hsa-miR-6739-5p 0 1 0
chr7:102450449|102450768 hsa-miR-4700-5p 0 1 0
chr7:102450449|102450768 hsa-miR-6785-5p 1 0 0
chr7:102450449|102450768 hsa-miR-4667-5p 0 1 0
chr7:102450449|102450768 hsa-miR-320a-3p 1 0 0
chr7:102450449|102450768 hsa-miR-3059-5p 0 1 0
chr7:102450449|102450768 hsa-miR-4768-5p 0 1 0
chr7:102450449|102450768 hsa-miR-146b-5p 1 0 0
chr7:102450449|102450768 hsa-miR-708-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:102450449|102450768
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MYLVPRQSSWPGSIQAGIKCPVMVAHGWGRSHIQV
Nucleotide Sequence CTGTACCTGGTCCCCAGGCAGAGCTCTTGGCCTGGCAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAG
CircID chr7:102450449|102450768
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MGASYCTWSPGRALGLAASRQVLSAQ
Nucleotide Sequence CTGGGGGCCAGTTACTGTACCTGGTCCCCAGGCAGAGCTCTTGGCCTGGCAGCATCCAGGCAGGTATTAAGTGCCCAGTGA
CircID chr7:102450449|102450768
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MGGDGATSKSSPLIRRMTVLEFLVLFLLGFSFSQLQPF
Nucleotide Sequence ATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCTCTGATTAGGAGGATGACAGTCTTGGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTTCTAG
CircID chr7:102450449|102450768
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MRQTIAVGIAVTIGRAMVAGRGNLRVTPE
Nucleotide Sequence ATGAGGCAAACCATTGCTGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCTCAGGGTCACCCCAGAG
CircID chr7:102450449|102450768
ORF Type ORF5
Protein Length 38
Nucleotide Length 117
Protein Sequence MLFPQQWFASCLETRKAGAGRTRTLGEREQEIPRLSSS
Nucleotide Sequence CTGCTATTCCCACAGCAATGGTTTGCCTCATGCCTCGAAACTAGAAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCAAGACTGTCATCCTCCTAA
CircID chr7:102450449|102450768
ORF Type ORF6
Protein Length 42
Nucleotide Length 126
Protein Sequence MWLRPHPCATITGHLIPAWMLPGQELCLGTRYSNWPPDGTGD
Nucleotide Sequence ATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGCCAGGCCAAGAGCTCTGCCTGGGGACCAGGTACAGTAACTGGCCCCCAGATGGCACTGGAGAT
CircID chr7:102450449|102450768
ORF Type ORF7
Protein Length 26
Nucleotide Length 78
Protein Sequence MPGCCQAKSSAWGPGTVTGPQMALEM
Nucleotide Sequence CTGCCTGGATGCTGCCAGGCCAAGAGCTCTGCCTGGGGACCAGGTACAGTAACTGGCCCCCAGATGGCACTGGAGATG
CircID chr7:102450449|102450768
ORF Type ORF8
Protein Length 28
Nucleotide Length 87
Protein Sequence MRFPLPATMALPMVTAIPTAMVCLMPRN
Nucleotide Sequence CTGAGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAGCAATGGTTTGCCTCATGCCTCGAAACTAG
CircID chr7:102450449|102450768
ORF Type ORF9
Protein Length 34
Nucleotide Length 105
Protein Sequence MDVAPSPPMCHHHWALNTCLDAARPRALPGDQVQ
Nucleotide Sequence TTGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGCCAGGCCAAGAGCTCTGCCTGGGGACCAGGTACAGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab