CircRNA Information

General Information
circRNA Basic Information
CircID chr7:103319756|103322632
Strand -
CircType exon
Host Gene ENSG00000105821.14;
Algorism find_circ;CIRI2;DCC;
Sequence ACAATGCATACAGCTGTGATCCAAGGATAAAAAAGTTCAAGGAAGAAGAAAAAGCCAAGAAAGAAGCAGAAAAGAAAGCAAAAGCAGAAGCTAAACGGAAGGAGCAAGAAGCTAAAGAAAAACAAAGACAAGCTGAATTAGAAGCTGCTCGGTTAGCTAAGGAGAAAGAAGAGGAGGAAGTCAGACAGCAAGCATTGCTGGCAAAGAAGGAAAAAGATATCCAGAAAAAAGCCATTAAGAAGGAAAGGCAAAAACTTCGAAACTCATGCAAGACCTGGAATCATTTTTCTGATAATGAGGCAGAGCGGGTTAAAATGATGGAAGAAGTGGAAAAACTTTGTGATCGGCTTGAACTGGCAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:103319756|103322632 hsa-miR-125b-1-3p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:103319756|103322632
ORF Type ORF1
Protein Length 78
Nucleotide Length 234
Protein Sequence MAFFWISFSFFASNACCLTSSSSFSLANRAASNSACLCFSLASCSFRLASAFAFFSASFLAFSSSLNFFILGSQLYAL
Nucleotide Sequence ATGGCTTTTTTCTGGATATCTTTTTCCTTCTTTGCCAGCAATGCTTGCTGTCTGACTTCCTCCTCTTCTTTCTCCTTAGCTAACCGAGCAGCTTCTAATTCAGCTTGTCTTTGTTTTTCTTTAGCTTCTTGCTCCTTCCGTTTAGCTTCTGCTTTTGCTTTCTTTTCTGCTTCTTTCTTGGCTTTTTCTTCTTCCTTGAACTTTTTTATCCTTGGATCACAGCTGTATGCATTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr7:103319756|103322632 KHSRP 2 3 0
chr7:103319756|103322632 MOV10 1 0 0
chr7:103319756|103322632 ELAVL1 6 3 2
chr7:103319756|103322632 DHX9 0 1 0
chr7:103319756|103322632 SF3B4 1 1 0
chr7:103319756|103322632 FAM120A 1 0 2
chr7:103319756|103322632 PRPF8 6 5 6
chr7:103319756|103322632 UPF1 2 2 0
chr7:103319756|103322632 SRSF10 0 1 0
chr7:103319756|103322632 TNRC6A 0 0 1
chr7:103319756|103322632 FMR1 4 4 6
chr7:103319756|103322632 CPSF6 4 2 5
chr7:103319756|103322632 TIA1 1 1 0
chr7:103319756|103322632 TROVE2 1 0 0
chr7:103319756|103322632 FUS 1 0 0
chr7:103319756|103322632 SRSF7 1 1 0
chr7:103319756|103322632 SRSF1 10 7 11
chr7:103319756|103322632 NOP58 6 3 6
chr7:103319756|103322632 U2AF1 2 3 3
chr7:103319756|103322632 U2AF2 19 12 10
chr7:103319756|103322632 SRSF9 0 0 2
chr7:103319756|103322632 NOP56 0 2 0
chr7:103319756|103322632 DDX54 5 2 14
chr7:103319756|103322632 LSM11 1 0 0
chr7:103319756|103322632 RBM10 1 6 0
chr7:103319756|103322632 HNRNPM 0 1 0
chr7:103319756|103322632 SF3A3 1 0 0
chr7:103319756|103322632 RBM22 1 3 0
chr7:103319756|103322632 PTBP1 5 3 6
chr7:103319756|103322632 HNRNPC 1 5 0
chr7:103319756|103322632 TRA2A 7 3 10
chr7:103319756|103322632 ZNF184 4 2 5
chr7:103319756|103322632 HNRNPA1 0 0 2
chr7:103319756|103322632 DDX3X 0 2 0
chr7:103319756|103322632 SMNDC1 4 2 2
chr7:103319756|103322632 MSI2 0 0 1
chr7:103319756|103322632 ACIN1 10 4 11
chr7:103319756|103322632 LIN28B 1 2 3
chr7:103319756|103322632 QKI 0 1 0
chr7:103319756|103322632 FXR1 0 2 1
chr7:103319756|103322632 FXR2 1 1 2
chr7:103319756|103322632 SND1 1 0 0
chr7:103319756|103322632 IGF2BP1 1 2 0
chr7:103319756|103322632 BUD13 4 1 4
chr7:103319756|103322632 IGF2BP3 1 1 1
chr7:103319756|103322632 IGF2BP2 9 8 13
chr7:103319756|103322632 NPM1 0 1 0
chr7:103319756|103322632 HNRNPUL1 3 0 1
chr7:103319756|103322632 TARDBP 4 3 4
chr7:103319756|103322632 TAF15 1 2 0
chr7:103319756|103322632 GTF2F1 0 1 1
chr7:103319756|103322632 RBFOX2 0 2 2
chr7:103319756|103322632 SLTM 0 0 1
chr7:103319756|103322632 EIF4G2 2 1 3
chr7:103319756|103322632 DDX42 0 2 0
chr7:103319756|103322632 CSTF2T 3 1 5
chr7:103319756|103322632 BCCIP 0 0 1
chr7:103319756|103322632 SAFB2 4 2 4
chr7:103319756|103322632 RNF219 1 0 0
chr7:103319756|103322632 XRN2 1 1 3
chr7:103319756|103322632 YWHAG 0 0 2
chr7:103319756|103322632 FBL 4 2 6
chr7:103319756|103322632 AGO1 0 1 0
chr7:103319756|103322632 EIF4A3 4 4 5
chr7:103319756|103322632 AGO2 3 1 1