CircNet

General Information

circRNA Basic Information

CircID	chr7:108223725\|108240170
Strand	-
CircType	exon
Host Gene	ENSG00000091129.19;
Algorism	find_circ;CIRI2;DCC;
Sequence	TTTCCCGCATGAAAATTACTTAAACGTTGCACACAACGTTTCACAAAATCTTTTGTGAAAGAAGAAAAGGAAATTCAGTGTGTGAGTCTCAGCAGGAGTTAAGCTAATGCAGCTTAAAATAATGCCGAAAAAGAAGCGCTTATCTGCGGGCAGAGTGCCCCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACTGGAAGTACCTCTTGATCCTAAATCAAGTAGAGAGAGGCCACCAACATTTTTAACTCCAGAAGGCAATGCAAGTAACAAAGAGGAATTAAGAGGAAATGTGCTTTCACTGGAGTGCATTGCAGAAGGACT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr7:108223725\|108240170
ORF Type	ORF1
Protein Length	99
Nucleotide Length	297
Protein Sequence	MHSSESTFPLNSSLLLALPSGVKNVGGLSLLDLGSRGTSSALIIWHRKRIRGTLPADKRFFFGIILSCISLTPAETHTLNFLFFFHKRFCETLCATFK*
Nucleotide Sequence	ATGCACTCCAGTGAAAGCACATTTCCTCTTAATTCCTCTTTGTTACTTGCATTGCCTTCTGGAGTTAAAAATGTTGGTGGCCTCTCTCTACTTGATTTAGGATCAAGAGGTACTTCCAGTGCACTAATCATCTGGCACAGGAAGAGAATCAGGGGCACTCTGCCCGCAGATAAGCGCTTCTTTTTCGGCATTATTTTAAGCTGCATTAGCTTAACTCCTGCTGAGACTCACACACTGAATTTCCTTTTCTTCTTTCACAAAAGATTTTGTGAAACGTTGTGTGCAACGTTTAAGTAA

CircID	chr7:108223725\|108240170
ORF Type	ORF2
Protein Length	72
Nucleotide Length	216
Protein Sequence	MQLKIMPKKKRLSAGRVPLILFLCQMISALEVPLDPKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEG
Nucleotide Sequence	ATGCAGCTTAAAATAATGCCGAAAAAGAAGCGCTTATCTGCGGGCAGAGTGCCCCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACTGGAAGTACCTCTTGATCCTAAATCAAGTAGAGAGAGGCCACCAACATTTTTAACTCCAGAAGGCAATGCAAGTAACAAAGAGGAATTAAGAGGAAATGTGCTTTCACTGGAGTGCATTGCAGAAGGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr7:108223725\|108240170	NOP56	1	0	0
chr7:108223725\|108240170	ELAVL1	0	1	1
chr7:108223725\|108240170	U2AF2	1	0	0
chr7:108223725\|108240170	CSTF2T	0	0	2
chr7:108223725\|108240170	DDX54	0	1	8
chr7:108223725\|108240170	FUS	3	1	0
chr7:108223725\|108240170	CNBP	0	0	1
chr7:108223725\|108240170	TAF15	0	1	0
chr7:108223725\|108240170	FMR1	0	0	1
chr7:108223725\|108240170	IGF2BP2	2	0	2
chr7:108223725\|108240170	AGO2	0	0	2
chr7:108223725\|108240170	EIF4A3	0	0	1
chr7:108223725\|108240170	NOP58	0	0	3

CircRNA Information