CircRNA Information

General Information
circRNA Basic Information
CircID chr7:112459559|112459747
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence ATTTTAATACTTTTAATATTTATTATCCAAATCCAGCTTCCTTGTTAGTATTACTTAAGGTAAGTAATAATGTTACTTAAGGTAAGTAACATTAATCTTTGTCTAAGTAGCTTGGTAAAAATTTATTTCTTCTTCTTATCATCACCACCCAATGTAAATTGGCTGGAACCCCAGGCCTCCACTGCAGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:112459559|112459747 hsa-miR-200b-5p 0 0 1
chr7:112459559|112459747 hsa-miR-200b-3p 0 0 1
chr7:112459559|112459747 hsa-miR-200c-5p 0 0 1
chr7:112459559|112459747 hsa-miR-200c-3p 0 0 1
chr7:112459559|112459747 hsa-miR-429 0 0 1
chr7:112459559|112459747 hsa-miR-650 0 0 1
chr7:112459559|112459747 hsa-miR-661 0 1 1
chr7:112459559|112459747 hsa-miR-802 0 0 1
chr7:112459559|112459747 hsa-miR-543 0 0 1
chr7:112459559|112459747 hsa-miR-1287-5p 0 0 1
chr7:112459559|112459747 hsa-miR-1287-3p 0 0 1
chr7:112459559|112459747 hsa-miR-1290 0 0 1
chr7:112459559|112459747 hsa-miR-1293 0 0 1
chr7:112459559|112459747 hsa-miR-548l 0 0 1
chr7:112459559|112459747 hsa-miR-1261 0 0 1
chr7:112459559|112459747 hsa-miR-1262 1 0 1
chr7:112459559|112459747 hsa-miR-548n 0 0 1
chr7:112459559|112459747 hsa-miR-409-3p 0 0 1
chr7:112459559|112459747 hsa-miR-513a-3p 0 0 1
chr7:112459559|112459747 hsa-miR-876-5p 0 0 1
chr7:112459559|112459747 hsa-miR-556-3p 0 0 1
chr7:112459559|112459747 hsa-miR-608 1 0 0
chr7:112459559|112459747 hsa-miR-3125 1 0 0
chr7:112459559|112459747 hsa-miR-3170 0 1 0
chr7:112459559|112459747 hsa-miR-4300 1 0 0
chr7:112459559|112459747 hsa-miR-3916 0 1 0
chr7:112459559|112459747 hsa-miR-4443 0 1 0
chr7:112459559|112459747 hsa-miR-4462 1 0 0
chr7:112459559|112459747 hsa-miR-3689c 1 0 0
chr7:112459559|112459747 hsa-miR-5191 1 0 0
chr7:112459559|112459747 hsa-miR-378j 0 1 0
chr7:112459559|112459747 hsa-miR-12115 0 1 0
chr7:112459559|112459747 hsa-miR-17-3p 0 1 0
chr7:112459559|112459747 hsa-miR-7155-5p 0 1 0
chr7:112459559|112459747 hsa-miR-671-5p 1 0 0
chr7:112459559|112459747 hsa-miR-6799-5p 1 0 0
chr7:112459559|112459747 hsa-miR-6741-5p 1 0 0
chr7:112459559|112459747 hsa-miR-3682-3p 0 1 0
chr7:112459559|112459747 hsa-miR-6742-5p 1 0 0
chr7:112459559|112459747 hsa-miR-6748-5p 1 0 0
chr7:112459559|112459747 hsa-miR-7855-5p 1 0 0
chr7:112459559|112459747 hsa-miR-6852-5p 0 1 0
chr7:112459559|112459747 hsa-miR-6749-5p 1 0 0
chr7:112459559|112459747 hsa-miR-6830-5p 0 1 0
chr7:112459559|112459747 hsa-miR-3689b-3p 1 0 0
chr7:112459559|112459747 hsa-miR-6769b-5p 1 0 0
chr7:112459559|112459747 hsa-miR-6726-5p 1 0 0
chr7:112459559|112459747 hsa-miR-6754-5p 0 1 0
chr7:112459559|112459747 hsa-miR-6756-5p 1 0 0
chr7:112459559|112459747 hsa-miR-6819-5p 1 0 0
chr7:112459559|112459747 hsa-miR-3689a-3p 1 0 0
chr7:112459559|112459747 hsa-miR-4632-5p 1 0 0
chr7:112459559|112459747 hsa-miR-6855-5p 0 1 0
chr7:112459559|112459747 hsa-miR-6891-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:112459559|112459747
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MLLKVSNINLCLSSLVKIYFFFLSSPPNVNWLEPQASTAA
Nucleotide Sequence ATGTTACTTAAGGTAAGTAACATTAATCTTTGTCTAAGTAGCTTGGTAAAAATTTATTTCTTCTTCTTATCATCACCACCCAATGTAAATTGGCTGGAACCCCAGGCCTCCACTGCAGCT

CircID chr7:112459559|112459747
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence LQWRPGVPANLHWVVMIRRRNKFLPSYLDKD
Nucleotide Sequence CTGCAGTGGAGGCCTGGGGTTCCAGCCAATTTACATTGGGTGGTGATGATAAGAAGAAGAAATAAATTTTTACCAAGCTACTTAGACAAAGATTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites