CircRNA Information

General Information
circRNA Basic Information
CircID chr7:119165378|119165493
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGTAGTCCCAGCTACTTGGCAGGCTGAGGCATGAGAACTGCTTGAACCTGGGAGGTGGAGGTGACAGTGTGCCAAGATTGTGCCACCGCAATCCAGCCTGGGAGACGATATAAAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:119165378|119165493
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MRHENCLNLGGGGDSVPRLCHRNPAWETI
Nucleotide Sequence CTGAGGCATGAGAACTGCTTGAACCTGGGAGGTGGAGGTGACAGTGTGCCAAGATTGTGCCACCGCAATCCAGCCTGGGAGACGATATAA

CircID chr7:119165378|119165493
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MRWHNLGTLSPPPPRFKQFSCLSLPSSWDY
Nucleotide Sequence TTGCGGTGGCACAATCTTGGCACACTGTCACCTCCACCTCCCAGGTTCAAGCAGTTCTCATGCCTCAGCCTGCCAAGTAGCTGGGACTAC

CircID chr7:119165378|119165493
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MDCGGTILAHCHLHLPGSSSSHASACQVAGTT
Nucleotide Sequence CTGGATTGCGGTGGCACAATCTTGGCACACTGTCACCTCCACCTCCCAGGTTCAAGCAGTTCTCATGCCTCAGCCTGCCAAGTAGCTGGGACTACA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites