CircRNA Information

General Information
circRNA Basic Information
CircID chr7:123685221|123685324
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCTTCTTAAAGTCCTCCTGTGGCTACCACTGCTATTTGAATGAAATCTGATGCTACCTCCCTCCATAAGACCCTACATGATTTGTCCAGTTATTGTCTCTCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:123685221|123685324 hsa-let-7b-5p 0 0 1
chr7:123685221|123685324 hsa-let-7b-3p 0 0 1
chr7:123685221|123685324 hsa-let-7c-5p 0 0 1
chr7:123685221|123685324 hsa-let-7c-3p 0 0 1
chr7:123685221|123685324 hsa-let-7d-5p 0 0 1
chr7:123685221|123685324 hsa-let-7d-3p 0 0 1
chr7:123685221|123685324 hsa-let-7e-5p 0 0 1
chr7:123685221|123685324 hsa-let-7e-3p 0 0 1
chr7:123685221|123685324 hsa-miR-98-5p 0 0 1
chr7:123685221|123685324 hsa-miR-98-3p 0 0 1
chr7:123685221|123685324 hsa-let-7g-5p 0 0 1
chr7:123685221|123685324 hsa-let-7g-3p 0 0 1
chr7:123685221|123685324 hsa-let-7i-5p 0 0 1
chr7:123685221|123685324 hsa-let-7i-3p 0 0 1
chr7:123685221|123685324 hsa-miR-607 0 0 1
chr7:123685221|123685324 hsa-miR-1298-5p 0 0 1
chr7:123685221|123685324 hsa-miR-1298-3p 0 0 1
chr7:123685221|123685324 hsa-miR-1182 1 1 1
chr7:123685221|123685324 hsa-miR-1321 0 0 1
chr7:123685221|123685324 hsa-miR-193a-5p 1 1 1
chr7:123685221|123685324 hsa-miR-582-3p 0 0 1
chr7:123685221|123685324 hsa-let-7a 0 0 1
chr7:123685221|123685324 hsa-let-7f 0 0 1
chr7:123685221|123685324 hsa-miR-422a 1 0 0
chr7:123685221|123685324 hsa-miR-650 1 0 0
chr7:123685221|123685324 hsa-miR-658 1 0 0
chr7:123685221|123685324 hsa-miR-1243 0 1 0
chr7:123685221|123685324 hsa-miR-3654 0 1 0
chr7:123685221|123685324 hsa-miR-378e 1 0 0
chr7:123685221|123685324 hsa-miR-4442 1 0 0
chr7:123685221|123685324 hsa-miR-378h 1 0 0
chr7:123685221|123685324 hsa-miR-3689c 1 0 0
chr7:123685221|123685324 hsa-miR-4510 1 1 0
chr7:123685221|123685324 hsa-miR-4525 1 0 0
chr7:123685221|123685324 hsa-miR-4533 1 0 0
chr7:123685221|123685324 hsa-miR-4534 1 0 0
chr7:123685221|123685324 hsa-miR-4654 1 0 0
chr7:123685221|123685324 hsa-miR-4706 1 0 0
chr7:123685221|123685324 hsa-miR-4739 1 1 0
chr7:123685221|123685324 hsa-miR-4779 1 0 0
chr7:123685221|123685324 hsa-miR-5698 1 0 0
chr7:123685221|123685324 hsa-miR-5739 1 0 0
chr7:123685221|123685324 hsa-miR-6081 1 0 0
chr7:123685221|123685324 hsa-miR-6127 1 0 0
chr7:123685221|123685324 hsa-miR-6129 1 0 0
chr7:123685221|123685324 hsa-miR-6133 1 1 0
chr7:123685221|123685324 hsa-miR-6860 1 0 0
chr7:123685221|123685324 hsa-miR-8085 1 0 0
chr7:123685221|123685324 hsa-miR-6734-5p 1 0 0
chr7:123685221|123685324 hsa-miR-7106-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6825-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6799-5p 1 0 0
chr7:123685221|123685324 hsa-miR-1236-5p 1 0 0
chr7:123685221|123685324 hsa-miR-7114-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6515-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6880-5p 1 0 0
chr7:123685221|123685324 hsa-miR-7847-3p 1 0 0
chr7:123685221|123685324 hsa-miR-7845-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6742-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6793-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6796-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6827-5p 1 0 0
chr7:123685221|123685324 hsa-miR-3126-5p 1 0 0
chr7:123685221|123685324 hsa-miR-486-3p 1 0 0
chr7:123685221|123685324 hsa-miR-6760-5p 1 0 0
chr7:123685221|123685324 hsa-miR-30b-3p 1 0 0
chr7:123685221|123685324 hsa-miR-6835-5p 1 0 0
chr7:123685221|123685324 hsa-miR-7109-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6834-5p 1 0 0
chr7:123685221|123685324 hsa-miR-149-3p 1 0 0
chr7:123685221|123685324 hsa-miR-3191-3p 1 0 0
chr7:123685221|123685324 hsa-miR-1233-5p 1 0 0
chr7:123685221|123685324 hsa-miR-1273h-5p 1 0 0
chr7:123685221|123685324 hsa-miR-3689b-3p 1 0 0
chr7:123685221|123685324 hsa-miR-6778-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6787-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6812-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6865-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6754-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6815-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6842-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6851-5p 1 0 0
chr7:123685221|123685324 hsa-miR-11181-3p 1 0 0
chr7:123685221|123685324 hsa-miR-1249-5p 1 1 0
chr7:123685221|123685324 hsa-miR-6797-5p 1 1 0
chr7:123685221|123685324 hsa-miR-6875-5p 1 0 0
chr7:123685221|123685324 hsa-miR-7111-5p 1 0 0
chr7:123685221|123685324 hsa-miR-4728-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6780b-5p 1 0 0
chr7:123685221|123685324 hsa-miR-328-5p 1 0 0
chr7:123685221|123685324 hsa-miR-3689a-3p 1 0 0
chr7:123685221|123685324 hsa-miR-4649-5p 1 0 0
chr7:123685221|123685324 hsa-miR-4725-3p 1 0 0
chr7:123685221|123685324 hsa-miR-6738-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6795-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6858-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6883-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6887-5p 1 0 0
chr7:123685221|123685324 hsa-miR-4723-5p 1 0 0
chr7:123685221|123685324 hsa-miR-6885-5p 1 0 0
chr7:123685221|123685324 hsa-miR-5586-3p 1 0 0
chr7:123685221|123685324 hsa-miR-6731-5p 1 0 0
chr7:123685221|123685324 hsa-miR-1914-3p 1 0 0
chr7:123685221|123685324 hsa-miR-6891-5p 1 0 0
chr7:123685221|123685324 hsa-miR-541-3p 1 0 0
chr7:123685221|123685324 hsa-miR-6785-5p 1 0 0
chr7:123685221|123685324 hsa-miR-135a-2-3p 1 0 0
chr7:123685221|123685324 hsa-miR-3136-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:123685221|123685324
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MDKSCRVLWREVASDFIQIAVVATGGL
Nucleotide Sequence CTGGACAAATCATGTAGGGTCTTATGGAGGGAGGTAGCATCAGATTTCATTCAAATAGCAGTGGTAGCCACAGGAGGACTTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab