CircRNA Information

General Information
circRNA Basic Information
CircID chr7:127652275|127652427
Strand +
CircType exon
Host Gene ENSG00000197157.9;
Algorism CIRI2;
Sequence GGTGGGGACCGCGGGTCCCCCGGAGGAGCCGCCGCTCTGCGCGGAGGACGCCATGTGTGGAGATGCAAAGGCAACGAGTGGAGCGGCTGGCCGGACTGGAGGTGTCAATGTGGGTGTCGGTGTTGGTGAAAGGGAGTCGAGGCGAGGGGCAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:127652275|127652427 hsa-miR-197-5p 0 0 1
chr7:127652275|127652427 hsa-miR-197-3p 0 0 1
chr7:127652275|127652427 hsa-miR-204-5p 0 0 1
chr7:127652275|127652427 hsa-miR-204-3p 0 0 1
chr7:127652275|127652427 hsa-miR-211-5p 0 0 1
chr7:127652275|127652427 hsa-miR-211-3p 0 0 1
chr7:127652275|127652427 hsa-miR-937-5p 0 0 1
chr7:127652275|127652427 hsa-miR-937-3p 0 0 1
chr7:127652275|127652427 hsa-miR-1281 0 0 1
chr7:127652275|127652427 hsa-miR-324-3p 0 0 1
chr7:127652275|127652427 hsa-miR-514 0 0 1
chr7:127652275|127652427 hsa-miR-637 1 0 0
chr7:127652275|127652427 hsa-miR-1470 1 0 0
chr7:127652275|127652427 hsa-miR-1913 1 1 0
chr7:127652275|127652427 hsa-miR-4526 1 0 0
chr7:127652275|127652427 hsa-miR-3960 0 1 0
chr7:127652275|127652427 hsa-miR-18a-3p 1 0 0
chr7:127652275|127652427 hsa-miR-668-3p 1 0 0
chr7:127652275|127652427 hsa-miR-6836-3p 1 0 0
chr7:127652275|127652427 hsa-miR-210-5p 1 0 0
chr7:127652275|127652427 hsa-miR-1915-5p 1 0 0
chr7:127652275|127652427 hsa-miR-4655-3p 1 0 0
chr7:127652275|127652427 hsa-miR-1343-3p 1 0 0
chr7:127652275|127652427 hsa-miR-6772-3p 1 0 0
chr7:127652275|127652427 hsa-miR-6803-3p 1 1 0
chr7:127652275|127652427 hsa-miR-6736-3p 1 0 0
chr7:127652275|127652427 hsa-miR-6769a-3p 1 0 0
chr7:127652275|127652427 hsa-miR-6743-3p 0 1 0
chr7:127652275|127652427 hsa-miR-6730-3p 1 0 0
chr7:127652275|127652427 hsa-miR-6746-3p 1 0 0
chr7:127652275|127652427 hsa-miR-6886-3p 1 0 0
chr7:127652275|127652427 hsa-miR-4749-3p 1 1 0
chr7:127652275|127652427 hsa-miR-6795-3p 1 1 0
chr7:127652275|127652427 hsa-miR-1229-3p 1 0 0
chr7:127652275|127652427 hsa-miR-34c-3p 1 0 0
chr7:127652275|127652427 hsa-miR-4423-5p 0 1 0
chr7:127652275|127652427 hsa-miR-514a-3p 0 1 0
chr7:127652275|127652427 hsa-miR-10400-5p 0 1 0
chr7:127652275|127652427 hsa-miR-4685-3p 0 1 0
chr7:127652275|127652427 hsa-miR-10398-5p 1 0 0
chr7:127652275|127652427 hsa-miR-10401-3p 1 0 0
chr7:127652275|127652427 hsa-miR-3922-3p 1 0 0
chr7:127652275|127652427 hsa-miR-514b-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:127652275|127652427
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MRGGRHVWRCKGNEWSGWPDWRCQCGCRCW
Nucleotide Sequence CTGCGCGGAGGACGCCATGTGTGGAGATGCAAAGGCAACGAGTGGAGCGGCTGGCCGGACTGGAGGTGTCAATGTGGGTGTCGGTGTTGGTGA

CircID chr7:127652275|127652427
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MCGDAKATSGAAGRTGGVNVGVGVGERESRRGA
Nucleotide Sequence ATGTGTGGAGATGCAAAGGCAACGAGTGGAGCGGCTGGCCGGACTGGAGGTGTCAATGTGGGTGTCGGTGTTGGTGAAAGGGAGTCGAGGCGAGGGGCA

CircID chr7:127652275|127652427
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MQRQRVERLAGLEVSMWVSVLVKGSRGEGQ
Nucleotide Sequence ATGCAAAGGCAACGAGTGGAGCGGCTGGCCGGACTGGAGGTGTCAATGTGGGTGTCGGTGTTGGTGAAAGGGAGTCGAGGCGAGGGGCAG

CircID chr7:127652275|127652427
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MTPPVRPAAPLVAFASPHMASSAQSGGSSGGPAVPT
Nucleotide Sequence TTGACACCTCCAGTCCGGCCAGCCGCTCCACTCGTTGCCTTTGCATCTCCACACATGGCGTCCTCCGCGCAGAGCGGCGGCTCCTCCGGGGGACCCGCGGTCCCCACC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites