CircRNA Information

General Information
circRNA Basic Information
CircID chr7:129831081|129831427
Strand -
CircType exon
Host Gene ENSG00000186591.10;
Algorism CIRI2;
Sequence CTGCGCATGACAGGGCCGGCTCCCCCTTCTCAAAGGGCTTCCTCCCACTCATCCCATCCCTAACAGAATCGCCGAGGTGTTCACGGGCCAGAGAAAGCACAAACATGGATTCAGAAGTCCAAAGAAATGCAGTTCGTTGCGCCCAATCAGAGATAGATGATTTCATTCAACAAGGCTGGAAGCCCAGTTGGGAAGTCGATAAAAAATCTTGCTAACTTTTTTAAATGGCTTTTACTTTTCTAAGTCACTGAAACAAGGAAGGGCCACATGCCATTTAAAATCAAACACTAGTTCCCAGAGACTTGGTGTCCAGAAACTTGACCCACAGAGGCTAGCGGAGGATCTGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:129831081|129831427 hsa-miR-217-5p 0 0 1
chr7:129831081|129831427 hsa-miR-217-3p 0 0 1
chr7:129831081|129831427 hsa-miR-328-5p 0 0 1
chr7:129831081|129831427 hsa-miR-328-3p 0 0 1
chr7:129831081|129831427 hsa-miR-326 1 0 1
chr7:129831081|129831427 hsa-miR-422a 0 0 1
chr7:129831081|129831427 hsa-miR-522-5p 0 0 1
chr7:129831081|129831427 hsa-miR-522-3p 0 0 1
chr7:129831081|129831427 hsa-miR-559 0 0 1
chr7:129831081|129831427 hsa-miR-580-5p 0 0 1
chr7:129831081|129831427 hsa-miR-580-3p 0 0 1
chr7:129831081|129831427 hsa-miR-593-5p 0 0 1
chr7:129831081|129831427 hsa-miR-593-3p 0 0 1
chr7:129831081|129831427 hsa-miR-617 0 1 1
chr7:129831081|129831427 hsa-miR-636 0 0 1
chr7:129831081|129831427 hsa-miR-653-5p 0 0 1
chr7:129831081|129831427 hsa-miR-653-3p 0 0 1
chr7:129831081|129831427 hsa-miR-891a-5p 0 0 1
chr7:129831081|129831427 hsa-miR-891a-3p 0 0 1
chr7:129831081|129831427 hsa-miR-939-5p 0 0 1
chr7:129831081|129831427 hsa-miR-939-3p 0 0 1
chr7:129831081|129831427 hsa-miR-663b 1 1 1
chr7:129831081|129831427 hsa-miR-548j-5p 0 0 1
chr7:129831081|129831427 hsa-miR-548j-3p 0 0 1
chr7:129831081|129831427 hsa-miR-1291 0 0 1
chr7:129831081|129831427 hsa-miR-1299 0 0 1
chr7:129831081|129831427 hsa-miR-1253 0 0 1
chr7:129831081|129831427 hsa-miR-1255a 0 0 1
chr7:129831081|129831427 hsa-miR-1258 0 0 1
chr7:129831081|129831427 hsa-miR-548n 0 0 1
chr7:129831081|129831427 hsa-miR-1292-5p 0 0 1
chr7:129831081|129831427 hsa-miR-1292-3p 0 0 1
chr7:129831081|129831427 hsa-miR-1307-5p 0 0 1
chr7:129831081|129831427 hsa-miR-1307-3p 0 0 1
chr7:129831081|129831427 hsa-miR-671-5p 1 1 1
chr7:129831081|129831427 hsa-miR-146b-3p 0 0 1
chr7:129831081|129831427 hsa-miR-339-5p 0 0 1
chr7:129831081|129831427 hsa-miR-509-3p 0 0 1
chr7:129831081|129831427 hsa-miR-502-5p 0 0 1
chr7:129831081|129831427 hsa-miR-330-5p 0 1 1
chr7:129831081|129831427 hsa-miR-548b-5p 0 0 1
chr7:129831081|129831427 hsa-miR-548d-5p 0 0 1
chr7:129831081|129831427 hsa-miR-548c-5p 0 0 1
chr7:129831081|129831427 hsa-miR-548a-5p 0 0 1
chr7:129831081|129831427 hsa-miR-548i 0 0 1
chr7:129831081|129831427 hsa-miR-1255b 0 0 1
chr7:129831081|129831427 hsa-miR-9 0 0 1
chr7:129831081|129831427 hsa-miR-378 0 0 1
chr7:129831081|129831427 hsa-miR-1269 0 0 1
chr7:129831081|129831427 hsa-miR-1300 0 0 1
chr7:129831081|129831427 hsa-miR-218 0 0 1
chr7:129831081|129831427 hsa-miR-516b 0 0 1
chr7:129831081|129831427 hsa-miR-129-3p 0 0 1
chr7:129831081|129831427 hsa-miR-548h 0 0 1
chr7:129831081|129831427 hsa-miR-608 1 0 0
chr7:129831081|129831427 hsa-miR-762 1 0 0
chr7:129831081|129831427 hsa-miR-2113 0 1 0
chr7:129831081|129831427 hsa-miR-1469 1 0 0
chr7:129831081|129831427 hsa-miR-3138 1 0 0
chr7:129831081|129831427 hsa-miR-3147 1 0 0
chr7:129831081|129831427 hsa-miR-3154 1 1 0
chr7:129831081|129831427 hsa-miR-4314 0 1 0
chr7:129831081|129831427 hsa-miR-378g 0 1 0
chr7:129831081|129831427 hsa-miR-4488 1 0 0
chr7:129831081|129831427 hsa-miR-2392 1 0 0
chr7:129831081|129831427 hsa-miR-4525 1 0 0
chr7:129831081|129831427 hsa-miR-4533 1 0 0
chr7:129831081|129831427 hsa-miR-4651 1 0 0
chr7:129831081|129831427 hsa-miR-4656 1 0 0
chr7:129831081|129831427 hsa-miR-4739 1 0 0
chr7:129831081|129831427 hsa-miR-5572 1 0 0
chr7:129831081|129831427 hsa-miR-5698 1 0 0
chr7:129831081|129831427 hsa-miR-5705 1 0 0
chr7:129831081|129831427 hsa-miR-6126 1 0 0
chr7:129831081|129831427 hsa-miR-8053 1 1 0
chr7:129831081|129831427 hsa-miR-8089 1 0 0
chr7:129831081|129831427 hsa-miR-12128 1 0 0
chr7:129831081|129831427 hsa-miR-134-3p 0 1 0
chr7:129831081|129831427 hsa-miR-135a-3p 1 0 0
chr7:129831081|129831427 hsa-miR-4433b-3p 1 0 0
chr7:129831081|129831427 hsa-miR-7106-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6894-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6857-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6720-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6728-5p 1 1 0
chr7:129831081|129831427 hsa-miR-766-5p 1 0 0
chr7:129831081|129831427 hsa-miR-5187-5p 1 1 0
chr7:129831081|129831427 hsa-miR-6757-5p 1 1 0
chr7:129831081|129831427 hsa-miR-8069 1 0 0
chr7:129831081|129831427 hsa-miR-218-5p 0 1 0
chr7:129831081|129831427 hsa-miR-3605-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6716-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6827-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6770-5p 0 1 0
chr7:129831081|129831427 hsa-miR-6782-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6735-3p 0 1 0
chr7:129831081|129831427 hsa-miR-7109-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6740-5p 1 0 0
chr7:129831081|129831427 hsa-miR-1229-5p 1 0 0
chr7:129831081|129831427 hsa-miR-296-3p 1 0 0
chr7:129831081|129831427 hsa-miR-3191-5p 0 1 0
chr7:129831081|129831427 hsa-miR-4638-3p 0 1 0
chr7:129831081|129831427 hsa-miR-4446-3p 1 0 0
chr7:129831081|129831427 hsa-miR-149-3p 1 0 0
chr7:129831081|129831427 hsa-miR-6717-5p 1 0 0
chr7:129831081|129831427 hsa-miR-4733-3p 1 0 0
chr7:129831081|129831427 hsa-miR-6824-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6789-5p 1 0 0
chr7:129831081|129831427 hsa-miR-3162-5p 1 0 0
chr7:129831081|129831427 hsa-miR-5010-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6499-5p 1 1 0
chr7:129831081|129831427 hsa-miR-598-5p 1 0 0
chr7:129831081|129831427 hsa-miR-4529-3p 1 1 0
chr7:129831081|129831427 hsa-miR-6790-3p 1 0 0
chr7:129831081|129831427 hsa-miR-1207-5p 1 0 0
chr7:129831081|129831427 hsa-miR-1233-5p 1 0 0
chr7:129831081|129831427 hsa-miR-4763-3p 1 0 0
chr7:129831081|129831427 hsa-miR-6778-5p 1 1 0
chr7:129831081|129831427 hsa-miR-6787-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6812-5p 1 1 0
chr7:129831081|129831427 hsa-miR-1343-5p 1 1 0
chr7:129831081|129831427 hsa-miR-6726-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6737-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6756-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6819-5p 1 0 0
chr7:129831081|129831427 hsa-miR-1249-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6779-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6780a-5p 0 1 0
chr7:129831081|129831427 hsa-miR-7111-5p 1 0 0
chr7:129831081|129831427 hsa-miR-4728-5p 1 0 0
chr7:129831081|129831427 hsa-miR-5196-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6780b-5p 1 0 0
chr7:129831081|129831427 hsa-miR-1237-5p 1 0 0
chr7:129831081|129831427 hsa-miR-4725-3p 1 0 0
chr7:129831081|129831427 hsa-miR-4745-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6858-5p 1 0 0
chr7:129831081|129831427 hsa-miR-4697-5p 1 0 0
chr7:129831081|129831427 hsa-miR-4723-5p 0 1 0
chr7:129831081|129831427 hsa-miR-1238-5p 1 1 0
chr7:129831081|129831427 hsa-miR-4758-5p 1 1 0
chr7:129831081|129831427 hsa-miR-6877-3p 1 0 0
chr7:129831081|129831427 hsa-miR-4700-5p 1 0 0
chr7:129831081|129831427 hsa-miR-6766-5p 1 1 0
chr7:129831081|129831427 hsa-miR-6724-5p 1 0 0
chr7:129831081|129831427 hsa-miR-4757-5p 1 1 0
chr7:129831081|129831427 hsa-miR-5009-5p 0 1 0
chr7:129831081|129831427 hsa-miR-6775-3p 0 1 0
chr7:129831081|129831427 hsa-miR-514b-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:129831081|129831427
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MISFNKAGSPVGKSIKNLANFFKWLLLF
Nucleotide Sequence ATGATTTCATTCAACAAGGCTGGAAGCCCAGTTGGGAAGTCGATAAAAAATCTTGCTAACTTTTTTAAATGGCTTTTACTTTTCTAA
CircID chr7:129831081|129831427
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MLTFLNGFYFSKSLKQGRATCHLKSNTSSQRLGVQKLDPQRLAEDL
Nucleotide Sequence TTGCTAACTTTTTTAAATGGCTTTTACTTTTCTAAGTCACTGAAACAAGGAAGGGCCACATGCCATTTAAAATCAAACACTAGTTCCCAGAGACTTGGTGTCCAGAAACTTGACCCACAGAGGCTAGCGGAGGATCTG
CircID chr7:129831081|129831427
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MDSEVQRNAVRCAQSEIDDFIQQGWKPSWEVDKKSC
Nucleotide Sequence ATGGATTCAGAAGTCCAAAGAAATGCAGTTCGTTGCGCCCAATCAGAGATAGATGATTTCATTCAACAAGGCTGGAAGCCCAGTTGGGAAGTCGATAAAAAATCTTGCTAA
CircID chr7:129831081|129831427
ORF Type ORF4
Protein Length 55
Nucleotide Length 165
Protein Sequence MKSSISDWAQRTAFLWTSESMFVLSLAREHLGDSVRDGMSGRKPFEKGEPALSCA
Nucleotide Sequence ATGAAATCATCTATCTCTGATTGGGCGCAACGAACTGCATTTCTTTGGACTTCTGAATCCATGTTTGTGCTTTCTCTGGCCCGTGAACACCTCGGCGATTCTGTTAGGGATGGGATGAGTGGGAGGAAGCCCTTTGAGAAGGGGGAGCCGGCCCTGTCATGCGCA
CircID chr7:129831081|129831427
ORF Type ORF5
Protein Length 33
Nucleotide Length 102
Protein Sequence MIGRNELHFFGLLNPCLCFLWPVNTSAILLGMG
Nucleotide Sequence CTGATTGGGCGCAACGAACTGCATTTCTTTGGACTTCTGAATCCATGTTTGTGCTTTCTCTGGCCCGTGAACACCTCGGCGATTCTGTTAGGGATGGGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab