CircRNA Information

General Information
circRNA Basic Information
CircID chr7:133035313|133035570
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTGGGCATCATGCACCACAACAAACAGGCCACTGAGAATGCAAAGGAGGAAGTGAGGCGAATTCTGGGGCTGCTGGATGCTTACTTGAAGACGAGGACTTTTCTGGTGGGCGAACGAGTGACATTGGCTGACATCACAGTTGTCTGCACCCTGTTGTGGCTCTATAAGCAGGTTCTAGAGCCTTCTTTCCGCCGGGCCTTTCGCAATACCAACCGCTGGTTCCTCACCTGCATTAACCAGCCCCAGTTCCGGGCTGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:133035313|133035570 hsa-miR-26b-5p 0 0 1
chr7:133035313|133035570 hsa-miR-26b-3p 0 0 1
chr7:133035313|133035570 hsa-miR-33a-5p 0 0 1
chr7:133035313|133035570 hsa-miR-33a-3p 0 0 1
chr7:133035313|133035570 hsa-miR-155-5p 0 0 1
chr7:133035313|133035570 hsa-miR-155-3p 0 0 1
chr7:133035313|133035570 hsa-miR-569 0 0 1
chr7:133035313|133035570 hsa-miR-33b-5p 0 0 1
chr7:133035313|133035570 hsa-miR-33b-3p 0 0 1
chr7:133035313|133035570 hsa-miR-657 0 0 1
chr7:133035313|133035570 hsa-miR-668-5p 0 0 1
chr7:133035313|133035570 hsa-miR-668-3p 0 0 1
chr7:133035313|133035570 hsa-miR-1297 0 0 1
chr7:133035313|133035570 hsa-miR-1281 0 0 1
chr7:133035313|133035570 hsa-miR-1322 0 0 1
chr7:133035313|133035570 hsa-miR-125a-3p 1 1 1
chr7:133035313|133035570 hsa-miR-338-3p 0 0 1
chr7:133035313|133035570 hsa-miR-26a 0 0 1
chr7:133035313|133035570 hsa-miR-549 0 0 1
chr7:133035313|133035570 hsa-miR-762 1 0 0
chr7:133035313|133035570 hsa-miR-1183 1 0 0
chr7:133035313|133035570 hsa-miR-663b 1 0 0
chr7:133035313|133035570 hsa-miR-1538 1 1 0
chr7:133035313|133035570 hsa-miR-3166 1 0 0
chr7:133035313|133035570 hsa-miR-4323 0 1 0
chr7:133035313|133035570 hsa-miR-3665 1 1 0
chr7:133035313|133035570 hsa-miR-3943 1 0 0
chr7:133035313|133035570 hsa-miR-4465 0 1 0
chr7:133035313|133035570 hsa-miR-4489 1 0 0
chr7:133035313|133035570 hsa-miR-4498 0 1 0
chr7:133035313|133035570 hsa-miR-4656 1 0 0
chr7:133035313|133035570 hsa-miR-4689 1 0 0
chr7:133035313|133035570 hsa-miR-4710 1 1 0
chr7:133035313|133035570 hsa-miR-4741 1 0 0
chr7:133035313|133035570 hsa-miR-5787 1 0 0
chr7:133035313|133035570 hsa-miR-6085 1 0 0
chr7:133035313|133035570 hsa-miR-6126 1 0 0
chr7:133035313|133035570 hsa-miR-8089 1 0 0
chr7:133035313|133035570 hsa-miR-138-5p 1 0 0
chr7:133035313|133035570 hsa-miR-4665-3p 1 0 0
chr7:133035313|133035570 hsa-miR-6822-3p 0 1 0
chr7:133035313|133035570 hsa-miR-6720-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6089 1 0 0
chr7:133035313|133035570 hsa-miR-6807-5p 1 0 0
chr7:133035313|133035570 hsa-miR-4695-5p 1 0 0
chr7:133035313|133035570 hsa-miR-3928-3p 1 0 0
chr7:133035313|133035570 hsa-miR-6806-5p 1 1 0
chr7:133035313|133035570 hsa-miR-7855-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6850-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6786-5p 1 0 0
chr7:133035313|133035570 hsa-miR-4707-3p 1 0 0
chr7:133035313|133035570 hsa-miR-1908-3p 1 0 0
chr7:133035313|133035570 hsa-miR-6784-5p 1 0 0
chr7:133035313|133035570 hsa-miR-1908-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6749-5p 1 0 0
chr7:133035313|133035570 hsa-miR-30a-3p 0 1 0
chr7:133035313|133035570 hsa-miR-4707-5p 1 0 0
chr7:133035313|133035570 hsa-miR-4778-3p 1 1 0
chr7:133035313|133035570 hsa-miR-5088-3p 1 0 0
chr7:133035313|133035570 hsa-miR-6773-3p 0 1 0
chr7:133035313|133035570 hsa-miR-597-5p 0 1 0
chr7:133035313|133035570 hsa-miR-5001-5p 1 1 0
chr7:133035313|133035570 hsa-miR-6726-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6769a-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6803-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6813-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6851-5p 1 0 0
chr7:133035313|133035570 hsa-miR-7107-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6751-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6797-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6780b-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6836-5p 1 0 0
chr7:133035313|133035570 hsa-miR-4745-3p 0 1 0
chr7:133035313|133035570 hsa-miR-675-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6846-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6848-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6858-5p 1 0 0
chr7:133035313|133035570 hsa-miR-10396a-3p 1 0 0
chr7:133035313|133035570 hsa-miR-10396b-3p 1 0 0
chr7:133035313|133035570 hsa-miR-6791-3p 1 0 0
chr7:133035313|133035570 hsa-miR-6724-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6829-3p 1 0 0
chr7:133035313|133035570 hsa-miR-9851-3p 1 0 0
chr7:133035313|133035570 hsa-miR-10392-3p 1 0 0
chr7:133035313|133035570 hsa-miR-6859-5p 1 0 0
chr7:133035313|133035570 hsa-miR-3619-5p 1 0 0
chr7:133035313|133035570 hsa-miR-6781-3p 1 0 0
chr7:133035313|133035570 hsa-miR-3914 0 1 0
chr7:133035313|133035570 hsa-miR-26a-5p 0 1 0
chr7:133035313|133035570 hsa-miR-6502-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:133035313|133035570
ORF Type ORF1
Protein Length 85
Nucleotide Length 255
Protein Sequence LGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRRAFRNTNRWFLTCINQPQFRA
Nucleotide Sequence TTGGGCATCATGCACCACAACAAACAGGCCACTGAGAATGCAAAGGAGGAAGTGAGGCGAATTCTGGGGCTGCTGGATGCTTACTTGAAGACGAGGACTTTTCTGGTGGGCGAACGAGTGACATTGGCTGACATCACAGTTGTCTGCACCCTGTTGTGGCTCTATAAGCAGGTTCTAGAGCCTTCTTTCCGCCGGGCCTTTCGCAATACCAACCGCTGGTTCCTCACCTGCATTAACCAGCCCCAGTTCCGGGCT

CircID chr7:133035313|133035570
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MSLVRPPEKSSSSSKHPAAPEFASLPPLHSQWPVCCGA
Nucleotide Sequence ATGTCACTCGTTCGCCCACCAGAAAAGTCCTCGTCTTCAAGTAAGCATCCAGCAGCCCCAGAATTCGCCTCACTTCCTCCTTTGCATTCTCAGTGGCCTGTTTGTTGTGGTGCATGA

CircID chr7:133035313|133035570
ORF Type ORF3
Protein Length 57
Nucleotide Length 171
Protein Sequence MLIEPQQGADNCDVSQCHSFAHQKSPRLQVSIQQPQNSPHFLLCILSGLFVVVHDAQ
Nucleotide Sequence CTGCTTATAGAGCCACAACAGGGTGCAGACAACTGTGATGTCAGCCAATGTCACTCGTTCGCCCACCAGAAAAGTCCTCGTCTTCAAGTAAGCATCCAGCAGCCCCAGAATTCGCCTCACTTCCTCCTTTGCATTCTCAGTGGCCTGTTTGTTGTGGTGCATGATGCCCAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites