CircRNA Information

General Information
circRNA Basic Information
CircID chr7:134928791|134928900
Strand +
CircType exon
Host Gene ENSG00000122786.18;
Algorism CIRI2;
Sequence CTGTTCTGGGCATTCACCTCCACCTGGTCGGTCACCTGTCCCAAGGATTCTTCCTCCTGCTTCTGCCGCAGCCGTTCCTGTCGGGCTCGGCGGCGCCGTTCCCGGGCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:134928791|134928900 hsa-miR-552-5p 0 0 1
chr7:134928791|134928900 hsa-miR-552-3p 0 0 1
chr7:134928791|134928900 hsa-miR-604 0 1 1
chr7:134928791|134928900 hsa-miR-298 1 1 1
chr7:134928791|134928900 hsa-miR-873-5p 0 0 1
chr7:134928791|134928900 hsa-miR-873-3p 0 0 1
chr7:134928791|134928900 hsa-miR-1257 0 0 1
chr7:134928791|134928900 hsa-miR-1292-5p 0 0 1
chr7:134928791|134928900 hsa-miR-1292-3p 0 0 1
chr7:134928791|134928900 hsa-miR-125a-3p 0 0 1
chr7:134928791|134928900 hsa-miR-615-3p 0 0 1
chr7:134928791|134928900 hsa-miR-362-5p 0 1 1
chr7:134928791|134928900 hsa-miR-1302 0 0 1
chr7:134928791|134928900 hsa-miR-337-5p 0 1 1
chr7:134928791|134928900 hsa-miR-500 0 0 1
chr7:134928791|134928900 hsa-miR-365 0 0 1
chr7:134928791|134928900 hsa-miR-765 1 0 0
chr7:134928791|134928900 hsa-miR-1538 1 0 0
chr7:134928791|134928900 hsa-miR-3122 0 1 0
chr7:134928791|134928900 hsa-miR-4293 1 1 0
chr7:134928791|134928900 hsa-miR-4298 1 1 0
chr7:134928791|134928900 hsa-miR-3937 1 0 0
chr7:134928791|134928900 hsa-miR-4439 1 0 0
chr7:134928791|134928900 hsa-miR-4476 1 1 0
chr7:134928791|134928900 hsa-miR-4479 1 0 0
chr7:134928791|134928900 hsa-miR-4513 1 0 0
chr7:134928791|134928900 hsa-miR-3960 1 0 0
chr7:134928791|134928900 hsa-miR-4739 1 0 0
chr7:134928791|134928900 hsa-miR-5787 1 0 0
chr7:134928791|134928900 hsa-miR-6081 1 0 0
chr7:134928791|134928900 hsa-miR-6165 1 1 0
chr7:134928791|134928900 hsa-miR-12114 1 1 0
chr7:134928791|134928900 hsa-miR-1247-3p 0 1 0
chr7:134928791|134928900 hsa-miR-4433a-3p 1 0 0
chr7:134928791|134928900 hsa-miR-6765-5p 1 0 0
chr7:134928791|134928900 hsa-miR-7106-5p 1 1 0
chr7:134928791|134928900 hsa-miR-6894-5p 1 0 0
chr7:134928791|134928900 hsa-miR-4687-3p 1 0 0
chr7:134928791|134928900 hsa-miR-6089 1 0 0
chr7:134928791|134928900 hsa-miR-6880-5p 0 1 0
chr7:134928791|134928900 hsa-miR-4695-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6746-5p 1 0 0
chr7:134928791|134928900 hsa-miR-4722-5p 1 1 0
chr7:134928791|134928900 hsa-miR-6820-5p 1 1 0
chr7:134928791|134928900 hsa-miR-6727-5p 1 0 0
chr7:134928791|134928900 hsa-miR-7845-5p 1 0 0
chr7:134928791|134928900 hsa-miR-7108-5p 1 0 0
chr7:134928791|134928900 hsa-miR-2467-3p 1 1 0
chr7:134928791|134928900 hsa-miR-6874-5p 1 0 0
chr7:134928791|134928900 hsa-miR-4640-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6771-5p 1 0 0
chr7:134928791|134928900 hsa-miR-92b-5p 1 1 0
chr7:134928791|134928900 hsa-miR-7854-3p 1 1 0
chr7:134928791|134928900 hsa-miR-6800-5p 1 0 0
chr7:134928791|134928900 hsa-miR-3189-3p 0 1 0
chr7:134928791|134928900 hsa-miR-3191-3p 1 0 0
chr7:134928791|134928900 hsa-miR-500a-5p 0 1 0
chr7:134928791|134928900 hsa-miR-10400-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6893-5p 1 0 0
chr7:134928791|134928900 hsa-miR-1343-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6743-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6803-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6815-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6851-5p 0 1 0
chr7:134928791|134928900 hsa-miR-11181-3p 1 0 0
chr7:134928791|134928900 hsa-miR-1249-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6722-3p 1 0 0
chr7:134928791|134928900 hsa-miR-6751-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6797-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6808-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6879-5p 1 0 0
chr7:134928791|134928900 hsa-miR-7111-5p 1 0 0
chr7:134928791|134928900 hsa-miR-6780b-5p 1 0 0
chr7:134928791|134928900 hsa-miR-1909-3p 1 0 0
chr7:134928791|134928900 hsa-miR-6858-5p 1 0 0
chr7:134928791|134928900 hsa-miR-1910-3p 1 1 0
chr7:134928791|134928900 hsa-miR-6511a-5p 1 0 0
chr7:134928791|134928900 hsa-miR-4716-3p 0 1 0
chr7:134928791|134928900 hsa-miR-3689d 0 1 0
chr7:134928791|134928900 hsa-miR-3136-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:134928791|134928900
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence LFWAFTSTWSVTCPKDSSSCFCRSRSCRARRRRSRA
Nucleotide Sequence CTGTTCTGGGCATTCACCTCCACCTGGTCGGTCACCTGTCCCAAGGATTCTTCCTCCTGCTTCTGCCGCAGCCGTTCCTGTCGGGCTCGGCGGCGCCGTTCCCGGGCT
CircID chr7:134928791|134928900
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MGIHLHLVGHLSQGFFLLLLPQPFLSGSAAPFPGC
Nucleotide Sequence CTGGGCATTCACCTCCACCTGGTCGGTCACCTGTCCCAAGGATTCTTCCTCCTGCTTCTGCCGCAGCCGTTCCTGTCGGGCTCGGCGGCGCCGTTCCCGGGCTGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab