CircRNA Information

General Information
circRNA Basic Information
CircID chr7:135161582|135161760
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CATACAAAATATGTTCCCGTCGGCAATTTTTCCCATACCATGGACTCAAATGGTTAAAACTCCTTATCATCCCAGACTAATGCCACCTTTTCAATTCCCAATAATTCCTTCCGTAACAAGCATCATTGCTCCAAGAATCTCTCAACTACATTCAAACCCGAGTCTTCAGACCCTTGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:135161582|135161760 hsa-miR-432-5p 0 0 1
chr7:135161582|135161760 hsa-miR-432-3p 0 0 1
chr7:135161582|135161760 hsa-miR-627-5p 0 0 1
chr7:135161582|135161760 hsa-miR-627-3p 0 0 1
chr7:135161582|135161760 hsa-miR-944 0 0 1
chr7:135161582|135161760 hsa-miR-297 0 0 1
chr7:135161582|135161760 hsa-miR-1182 1 1 1
chr7:135161582|135161760 hsa-miR-1256 0 0 1
chr7:135161582|135161760 hsa-miR-1252-5p 0 0 1
chr7:135161582|135161760 hsa-miR-1252-3p 0 0 1
chr7:135161582|135161760 hsa-miR-1322 0 0 1
chr7:135161582|135161760 hsa-miR-601 1 0 0
chr7:135161582|135161760 hsa-miR-3147 1 0 0
chr7:135161582|135161760 hsa-miR-4450 1 1 0
chr7:135161582|135161760 hsa-miR-4463 1 0 0
chr7:135161582|135161760 hsa-miR-4466 1 0 0
chr7:135161582|135161760 hsa-miR-4476 1 0 0
chr7:135161582|135161760 hsa-miR-4533 1 0 0
chr7:135161582|135161760 hsa-miR-4658 1 0 0
chr7:135161582|135161760 hsa-miR-4681 0 1 0
chr7:135161582|135161760 hsa-miR-4689 1 0 0
chr7:135161582|135161760 hsa-miR-4739 1 0 0
chr7:135161582|135161760 hsa-miR-5093 1 0 0
chr7:135161582|135161760 hsa-miR-5681a 1 1 0
chr7:135161582|135161760 hsa-miR-6081 1 0 0
chr7:135161582|135161760 hsa-miR-6125 1 0 0
chr7:135161582|135161760 hsa-miR-6745 1 0 0
chr7:135161582|135161760 hsa-miR-629-5p 1 0 0
chr7:135161582|135161760 hsa-miR-125b-1-3p 1 0 0
chr7:135161582|135161760 hsa-miR-7106-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6857-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6728-5p 1 1 0
chr7:135161582|135161760 hsa-miR-766-5p 1 0 0
chr7:135161582|135161760 hsa-miR-139-3p 1 0 0
chr7:135161582|135161760 hsa-miR-6746-5p 1 0 0
chr7:135161582|135161760 hsa-miR-4653-3p 1 0 0
chr7:135161582|135161760 hsa-miR-6730-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6871-5p 1 0 0
chr7:135161582|135161760 hsa-miR-1224-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6852-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6740-5p 1 1 0
chr7:135161582|135161760 hsa-miR-6771-5p 1 0 0
chr7:135161582|135161760 hsa-miR-149-3p 1 0 0
chr7:135161582|135161760 hsa-miR-6824-5p 1 0 0
chr7:135161582|135161760 hsa-miR-3162-5p 1 0 0
chr7:135161582|135161760 hsa-miR-3189-3p 1 0 0
chr7:135161582|135161760 hsa-miR-1207-5p 1 0 0
chr7:135161582|135161760 hsa-miR-4763-3p 1 0 0
chr7:135161582|135161760 hsa-miR-6812-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6865-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6813-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6815-5p 1 0 0
chr7:135161582|135161760 hsa-miR-10401-5p 1 0 0
chr7:135161582|135161760 hsa-miR-1249-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6763-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6797-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6780b-5p 1 0 0
chr7:135161582|135161760 hsa-miR-3085-5p 1 0 0
chr7:135161582|135161760 hsa-miR-4747-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6876-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6891-5p 1 0 0
chr7:135161582|135161760 hsa-miR-6790-5p 1 0 0
chr7:135161582|135161760 hsa-miR-5588-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:135161582|135161760
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence MFPSAIFPIPWTQMVKTPYHPRLMPPFQFPIIPSVTSIIAPRISQLHSNPSLQTLG
Nucleotide Sequence ATGTTCCCGTCGGCAATTTTTCCCATACCATGGACTCAAATGGTTAAAACTCCTTATCATCCCAGACTAATGCCACCTTTTCAATTCCCAATAATTCCTTCCGTAACAAGCATCATTGCTCCAAGAATCTCTCAACTACATTCAAACCCGAGTCTTCAGACCCTTGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab