CircRNA Information

General Information
circRNA Basic Information
CircID chr7:139345506|139345726
Strand -
CircType exon
Host Gene ENSG00000164898.11;
Algorism CIRI2;
Sequence CAGTGAAAAGTTGTGCAGAGCCCAACATGAGCTTCATTTCCAAGCTGCCACCTATCTCTGCCTCCTGCGTAGCATCCGGAAACATGTGGCCCTACATCAGGAATTTCATGGCAAGGGTGAGCGCTCGGTGGAGGAGTCTGCTGGCTTGGTGGGTCTCAAGTTGCCCCATCAGCCTGGAGGGAAGGGCTGGGAGCCATGAACATGGAGAATATCCTTGGATG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:139345506|139345726 hsa-miR-136-5p 0 0 1
chr7:139345506|139345726 hsa-miR-136-3p 0 0 1
chr7:139345506|139345726 hsa-miR-650 1 0 1
chr7:139345506|139345726 hsa-miR-1296-5p 0 0 1
chr7:139345506|139345726 hsa-miR-1296-3p 0 0 1
chr7:139345506|139345726 hsa-miR-891b 0 0 1
chr7:139345506|139345726 hsa-miR-760 0 0 1
chr7:139345506|139345726 hsa-miR-922 0 0 1
chr7:139345506|139345726 hsa-miR-1180-5p 0 0 1
chr7:139345506|139345726 hsa-miR-1180-3p 0 0 1
chr7:139345506|139345726 hsa-miR-1200 0 0 1
chr7:139345506|139345726 hsa-miR-1206 0 0 1
chr7:139345506|139345726 hsa-miR-1827 0 0 1
chr7:139345506|139345726 hsa-miR-127-5p 1 1 1
chr7:139345506|139345726 hsa-miR-769-5p 0 0 1
chr7:139345506|139345726 hsa-miR-486-3p 0 0 1
chr7:139345506|139345726 hsa-miR-885-3p 0 0 1
chr7:139345506|139345726 hsa-miR-515-5p 0 0 1
chr7:139345506|139345726 hsa-miR-642 0 0 1
chr7:139345506|139345726 hsa-miR-129-3p 0 0 1
chr7:139345506|139345726 hsa-miR-3612 0 1 0
chr7:139345506|139345726 hsa-miR-3929 0 1 0
chr7:139345506|139345726 hsa-miR-4467 1 0 0
chr7:139345506|139345726 hsa-miR-4538 1 1 0
chr7:139345506|139345726 hsa-miR-3960 1 0 0
chr7:139345506|139345726 hsa-miR-4674 1 1 0
chr7:139345506|139345726 hsa-miR-4683 1 0 0
chr7:139345506|139345726 hsa-miR-4767 1 0 0
chr7:139345506|139345726 hsa-miR-5093 0 1 0
chr7:139345506|139345726 hsa-miR-6079 1 0 0
chr7:139345506|139345726 hsa-miR-6088 1 0 0
chr7:139345506|139345726 hsa-miR-8075 0 1 0
chr7:139345506|139345726 hsa-miR-6822-3p 1 0 0
chr7:139345506|139345726 hsa-miR-4695-5p 1 1 0
chr7:139345506|139345726 hsa-miR-4722-5p 0 1 0
chr7:139345506|139345726 hsa-miR-6849-3p 1 0 0
chr7:139345506|139345726 hsa-miR-2467-5p 0 1 0
chr7:139345506|139345726 hsa-miR-6858-3p 0 1 0
chr7:139345506|139345726 hsa-miR-4640-5p 1 0 0
chr7:139345506|139345726 hsa-miR-4743-5p 1 0 0
chr7:139345506|139345726 hsa-miR-6802-5p 0 1 0
chr7:139345506|139345726 hsa-miR-135b-3p 0 1 0
chr7:139345506|139345726 hsa-miR-6741-3p 1 0 0
chr7:139345506|139345726 hsa-miR-3605-3p 1 0 0
chr7:139345506|139345726 hsa-miR-6886-3p 0 1 0
chr7:139345506|139345726 hsa-miR-6734-3p 0 1 0
chr7:139345506|139345726 hsa-miR-3675-5p 0 1 0
chr7:139345506|139345726 hsa-miR-6847-3p 0 1 0
chr7:139345506|139345726 hsa-miR-4716-5p 1 1 0
chr7:139345506|139345726 hsa-miR-10400-5p 1 0 0
chr7:139345506|139345726 hsa-miR-4763-3p 1 0 0
chr7:139345506|139345726 hsa-miR-6865-5p 1 1 0
chr7:139345506|139345726 hsa-miR-6743-5p 1 0 0
chr7:139345506|139345726 hsa-miR-6815-5p 1 1 0
chr7:139345506|139345726 hsa-miR-6808-5p 0 1 0
chr7:139345506|139345726 hsa-miR-328-5p 1 0 0
chr7:139345506|139345726 hsa-miR-4632-5p 1 0 0
chr7:139345506|139345726 hsa-miR-6848-5p 1 0 0
chr7:139345506|139345726 hsa-miR-1910-3p 0 1 0
chr7:139345506|139345726 hsa-miR-6511a-5p 0 1 0
chr7:139345506|139345726 hsa-miR-10398-5p 1 1 0
chr7:139345506|139345726 hsa-miR-6792-3p 0 1 0
chr7:139345506|139345726 hsa-miR-3928-5p 0 1 0
chr7:139345506|139345726 hsa-miR-7114-3p 1 0 0
chr7:139345506|139345726 hsa-miR-4691-5p 0 1 0
chr7:139345506|139345726 hsa-miR-129-1-3p 0 1 0
chr7:139345506|139345726 hsa-miR-129-2-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:139345506|139345726
ORF Type ORF1
Protein Length 62
Nucleotide Length 189
Protein Sequence MCRAQHELHFQAATYLCLLRSIRKHVALHQEFHGKGERSVEESAGLVGLKLPHQPGGKGWEP
Nucleotide Sequence TTGTGCAGAGCCCAACATGAGCTTCATTTCCAAGCTGCCACCTATCTCTGCCTCCTGCGTAGCATCCGGAAACATGTGGCCCTACATCAGGAATTTCATGGCAAGGGTGAGCGCTCGGTGGAGGAGTCTGCTGGCTTGGTGGGTCTCAAGTTGCCCCATCAGCCTGGAGGGAAGGGCTGGGAGCCATGA

CircID chr7:139345506|139345726
ORF Type ORF2
Protein Length 65
Nucleotide Length 195
Protein Sequence MSFISKLPPISASCVASGNMWPYIRNFMARVSARWRSLLAWWVSSCPISLEGRAGSHEHGEYPWM
Nucleotide Sequence ATGAGCTTCATTTCCAAGCTGCCACCTATCTCTGCCTCCTGCGTAGCATCCGGAAACATGTGGCCCTACATCAGGAATTTCATGGCAAGGGTGAGCGCTCGGTGGAGGAGTCTGCTGGCTTGGTGGGTCTCAAGTTGCCCCATCAGCCTGGAGGGAAGGGCTGGGAGCCATGAACATGGAGAATATCCTTGGATG

CircID chr7:139345506|139345726
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MMGQLETHQASRLLHRALTLAMKFLM
Nucleotide Sequence CTGATGGGGCAACTTGAGACCCACCAAGCCAGCAGACTCCTCCACCGAGCGCTCACCCTTGCCATGAAATTCCTGATGTAG

CircID chr7:139345506|139345726
ORF Type ORF4
Protein Length 28
Nucleotide Length 84
Protein Sequence MFPDATQEAEIGGSLEMKLMLGSAQLFT
Nucleotide Sequence ATGTTTCCGGATGCTACGCAGGAGGCAGAGATAGGTGGCAGCTTGGAAATGAAGCTCATGTTGGGCTCTGCACAACTTTTCACT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites