CircRNA Information

General Information
circRNA Basic Information
CircID chr7:140057465|140057611
Strand -
CircType exon
Host Gene ENSG00000059378.11;
Algorism CIRI2;
Sequence CTCTACAATCTACCTATACTCTTCCCACACTGACTCATCAACTCTCCCTTCCCCAAGCCCCAGTTTTCTCTGAGCTCTCTTTTCTACAATTCAAAGTCAAAGAGGCTCTGAGGGCTTAAAGCATCTTAGAGAAGGCCAAATACCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:140057465|140057611 hsa-miR-196b-5p 0 0 1
chr7:140057465|140057611 hsa-miR-196b-3p 0 0 1
chr7:140057465|140057611 hsa-miR-942-5p 0 0 1
chr7:140057465|140057611 hsa-miR-942-3p 0 0 1
chr7:140057465|140057611 hsa-miR-548e-5p 0 0 1
chr7:140057465|140057611 hsa-miR-548e-3p 0 0 1
chr7:140057465|140057611 hsa-miR-508-3p 0 0 1
chr7:140057465|140057611 hsa-miR-548a-3p 0 0 1
chr7:140057465|140057611 hsa-miR-548f 0 0 1
chr7:140057465|140057611 hsa-miR-219-2-3p 0 0 1
chr7:140057465|140057611 hsa-miR-196a 0 0 1
chr7:140057465|140057611 hsa-miR-219-1-3p 0 0 1
chr7:140057465|140057611 hsa-miR-658 1 0 0
chr7:140057465|140057611 hsa-miR-762 1 0 0
chr7:140057465|140057611 hsa-miR-765 1 0 0
chr7:140057465|140057611 hsa-miR-1268a 1 0 0
chr7:140057465|140057611 hsa-miR-2110 0 1 0
chr7:140057465|140057611 hsa-miR-2861 1 0 0
chr7:140057465|140057611 hsa-miR-3132 1 1 0
chr7:140057465|140057611 hsa-miR-3141 1 0 0
chr7:140057465|140057611 hsa-miR-3175 1 0 0
chr7:140057465|140057611 hsa-miR-4298 1 0 0
chr7:140057465|140057611 hsa-miR-4311 0 1 0
chr7:140057465|140057611 hsa-miR-4322 1 0 0
chr7:140057465|140057611 hsa-miR-4271 1 1 0
chr7:140057465|140057611 hsa-miR-3911 1 0 0
chr7:140057465|140057611 hsa-miR-1268b 1 0 0
chr7:140057465|140057611 hsa-miR-4450 1 0 0
chr7:140057465|140057611 hsa-miR-3135b 1 0 0
chr7:140057465|140057611 hsa-miR-4463 1 0 0
chr7:140057465|140057611 hsa-miR-3689c 1 0 0
chr7:140057465|140057611 hsa-miR-4510 1 0 0
chr7:140057465|140057611 hsa-miR-4644 1 0 0
chr7:140057465|140057611 hsa-miR-4648 1 0 0
chr7:140057465|140057611 hsa-miR-4651 1 0 0
chr7:140057465|140057611 hsa-miR-4654 1 0 0
chr7:140057465|140057611 hsa-miR-4706 1 0 0
chr7:140057465|140057611 hsa-miR-4710 1 0 0
chr7:140057465|140057611 hsa-miR-4739 1 0 0
chr7:140057465|140057611 hsa-miR-4748 1 0 0
chr7:140057465|140057611 hsa-miR-5192 1 1 0
chr7:140057465|140057611 hsa-miR-5698 1 0 0
chr7:140057465|140057611 hsa-miR-5787 1 0 0
chr7:140057465|140057611 hsa-miR-6090 1 0 0
chr7:140057465|140057611 hsa-miR-6127 1 0 0
chr7:140057465|140057611 hsa-miR-6129 1 0 0
chr7:140057465|140057611 hsa-miR-6133 1 0 0
chr7:140057465|140057611 hsa-miR-7515 1 1 0
chr7:140057465|140057611 hsa-miR-8085 1 0 0
chr7:140057465|140057611 hsa-miR-8089 1 0 0
chr7:140057465|140057611 hsa-miR-12128 1 0 0
chr7:140057465|140057611 hsa-miR-6734-5p 1 0 0
chr7:140057465|140057611 hsa-miR-7155-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6747-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6765-5p 1 0 0
chr7:140057465|140057611 hsa-miR-3150a-3p 1 0 0
chr7:140057465|140057611 hsa-miR-7106-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6825-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6857-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6854-5p 0 1 0
chr7:140057465|140057611 hsa-miR-6799-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6833-5p 1 0 0
chr7:140057465|140057611 hsa-miR-5187-5p 1 0 0
chr7:140057465|140057611 hsa-miR-1227-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6515-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6807-5p 1 0 0
chr7:140057465|140057611 hsa-miR-3192-5p 1 0 0
chr7:140057465|140057611 hsa-miR-3622b-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6721-5p 1 0 0
chr7:140057465|140057611 hsa-miR-197-5p 1 0 0
chr7:140057465|140057611 hsa-miR-8069 1 0 0
chr7:140057465|140057611 hsa-miR-7845-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6716-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6748-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6796-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6805-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6798-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6760-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6810-5p 1 0 0
chr7:140057465|140057611 hsa-miR-5088-5p 1 0 0
chr7:140057465|140057611 hsa-miR-7109-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6740-5p 1 0 0
chr7:140057465|140057611 hsa-miR-1229-5p 1 0 0
chr7:140057465|140057611 hsa-miR-193b-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6784-5p 1 0 0
chr7:140057465|140057611 hsa-miR-1908-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6771-5p 1 0 0
chr7:140057465|140057611 hsa-miR-92b-5p 1 0 0
chr7:140057465|140057611 hsa-miR-4732-5p 1 0 0
chr7:140057465|140057611 hsa-miR-3202 1 1 0
chr7:140057465|140057611 hsa-miR-149-3p 1 0 0
chr7:140057465|140057611 hsa-miR-937-5p 1 1 0
chr7:140057465|140057611 hsa-miR-6824-5p 1 0 0
chr7:140057465|140057611 hsa-miR-5010-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6864-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6832-5p 0 1 0
chr7:140057465|140057611 hsa-miR-328-3p 1 0 0
chr7:140057465|140057611 hsa-miR-1207-5p 1 0 0
chr7:140057465|140057611 hsa-miR-1233-5p 1 0 0
chr7:140057465|140057611 hsa-miR-3689b-3p 1 0 0
chr7:140057465|140057611 hsa-miR-4763-3p 1 0 0
chr7:140057465|140057611 hsa-miR-6778-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6812-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6816-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6870-5p 1 0 0
chr7:140057465|140057611 hsa-miR-1343-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6752-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6756-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6803-5p 1 0 0
chr7:140057465|140057611 hsa-miR-7110-5p 1 0 0
chr7:140057465|140057611 hsa-miR-10401-5p 1 1 0
chr7:140057465|140057611 hsa-miR-11181-3p 1 0 0
chr7:140057465|140057611 hsa-miR-1249-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6751-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6763-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6774-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6779-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6780a-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6797-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6808-5p 1 0 0
chr7:140057465|140057611 hsa-miR-7111-5p 1 0 0
chr7:140057465|140057611 hsa-miR-4728-5p 1 0 0
chr7:140057465|140057611 hsa-miR-5196-5p 1 1 0
chr7:140057465|140057611 hsa-miR-6780b-5p 1 0 0
chr7:140057465|140057611 hsa-miR-3689a-3p 1 0 0
chr7:140057465|140057611 hsa-miR-4649-5p 1 0 0
chr7:140057465|140057611 hsa-miR-4725-3p 1 1 0
chr7:140057465|140057611 hsa-miR-4745-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6729-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6777-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6794-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6883-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6889-5p 1 0 0
chr7:140057465|140057611 hsa-miR-4723-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6831-5p 1 1 0
chr7:140057465|140057611 hsa-miR-939-5p 1 0 0
chr7:140057465|140057611 hsa-miR-4758-5p 1 0 0
chr7:140057465|140057611 hsa-miR-4769-5p 1 0 0
chr7:140057465|140057611 hsa-miR-30c-1-3p 1 0 0
chr7:140057465|140057611 hsa-miR-6731-5p 1 1 0
chr7:140057465|140057611 hsa-miR-1914-3p 1 0 0
chr7:140057465|140057611 hsa-miR-6736-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6855-5p 1 1 0
chr7:140057465|140057611 hsa-miR-4700-5p 1 0 0
chr7:140057465|140057611 hsa-miR-4646-5p 1 0 0
chr7:140057465|140057611 hsa-miR-4747-5p 1 1 0
chr7:140057465|140057611 hsa-miR-6891-5p 1 0 0
chr7:140057465|140057611 hsa-miR-6785-5p 1 0 0
chr7:140057465|140057611 hsa-miR-4667-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:140057465|140057611
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MTHQLSLPQAPVFSELSFLQFKVKEALRA
Nucleotide Sequence CTGACTCATCAACTCTCCCTTCCCCAAGCCCCAGTTTTCTCTGAGCTCTCTTTTCTACAATTCAAAGTCAAAGAGGCTCTGAGGGCTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab