CircRNA Information

General Information
circRNA Basic Information
CircID chr7:141661603|141661806
Strand -
CircType exon
Host Gene ENSG00000257093.5;
Algorism CIRI2;
Sequence CGTCTTGTTAGCATCATGCTCCACCCTCTGAGTTAACCAGCTCAGATCCTTGCTAGATTTTGGAATCCAGTAAATCTGTGTTGACCCAGAGGTGCTGCTGCTAATGCCTCCAGAGAATTCGTGTCCAGATGAAGAGACTTAGAGTGGCTTCTCCATCCTGCTCGAACTTCAATTGCTCTATCCTCCGGTAGTCCAAACTTCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:141661603|141661806 hsa-miR-15a-5p 0 0 1
chr7:141661603|141661806 hsa-miR-15a-3p 0 0 1
chr7:141661603|141661806 hsa-miR-15b-5p 0 0 1
chr7:141661603|141661806 hsa-miR-15b-3p 0 0 1
chr7:141661603|141661806 hsa-miR-195-5p 0 0 1
chr7:141661603|141661806 hsa-miR-195-3p 0 0 1
chr7:141661603|141661806 hsa-miR-326 0 0 1
chr7:141661603|141661806 hsa-miR-422a 0 0 1
chr7:141661603|141661806 hsa-miR-424-5p 0 0 1
chr7:141661603|141661806 hsa-miR-424-3p 0 0 1
chr7:141661603|141661806 hsa-miR-497-5p 0 0 1
chr7:141661603|141661806 hsa-miR-497-3p 0 0 1
chr7:141661603|141661806 hsa-miR-503-5p 0 0 1
chr7:141661603|141661806 hsa-miR-503-3p 0 0 1
chr7:141661603|141661806 hsa-miR-505-5p 0 0 1
chr7:141661603|141661806 hsa-miR-505-3p 0 0 1
chr7:141661603|141661806 hsa-miR-558 0 0 1
chr7:141661603|141661806 hsa-miR-573 0 0 1
chr7:141661603|141661806 hsa-miR-646 0 0 1
chr7:141661603|141661806 hsa-miR-650 0 0 1
chr7:141661603|141661806 hsa-miR-1264 0 0 1
chr7:141661603|141661806 hsa-miR-1236-5p 0 0 1
chr7:141661603|141661806 hsa-miR-1236-3p 0 0 1
chr7:141661603|141661806 hsa-miR-1243 0 0 1
chr7:141661603|141661806 hsa-miR-1322 0 0 1
chr7:141661603|141661806 hsa-miR-330-5p 0 0 1
chr7:141661603|141661806 hsa-miR-16 0 0 1
chr7:141661603|141661806 hsa-miR-378 0 0 1
chr7:141661603|141661806 hsa-miR-1269 0 0 1
chr7:141661603|141661806 hsa-miR-516b 0 0 1
chr7:141661603|141661806 hsa-miR-1185 0 0 1
chr7:141661603|141661806 hsa-miR-378b 1 0 0
chr7:141661603|141661806 hsa-miR-4303 0 1 0
chr7:141661603|141661806 hsa-miR-4443 0 1 0
chr7:141661603|141661806 hsa-miR-4462 1 0 0
chr7:141661603|141661806 hsa-miR-4531 0 1 0
chr7:141661603|141661806 hsa-miR-4534 0 1 0
chr7:141661603|141661806 hsa-miR-4748 1 0 0
chr7:141661603|141661806 hsa-miR-5191 0 1 0
chr7:141661603|141661806 hsa-miR-6081 1 0 0
chr7:141661603|141661806 hsa-miR-6165 0 1 0
chr7:141661603|141661806 hsa-miR-6745 0 1 0
chr7:141661603|141661806 hsa-miR-8063 0 1 0
chr7:141661603|141661806 hsa-miR-6894-5p 1 1 0
chr7:141661603|141661806 hsa-miR-6804-5p 0 1 0
chr7:141661603|141661806 hsa-miR-6880-5p 0 1 0
chr7:141661603|141661806 hsa-miR-4695-5p 1 0 0
chr7:141661603|141661806 hsa-miR-197-5p 1 0 0
chr7:141661603|141661806 hsa-miR-3605-5p 1 0 0
chr7:141661603|141661806 hsa-miR-6798-5p 1 0 0
chr7:141661603|141661806 hsa-miR-1226-5p 1 0 0
chr7:141661603|141661806 hsa-miR-4786-3p 1 1 0
chr7:141661603|141661806 hsa-miR-4732-5p 1 0 0
chr7:141661603|141661806 hsa-miR-4638-3p 0 1 0
chr7:141661603|141661806 hsa-miR-516b-5p 1 1 0
chr7:141661603|141661806 hsa-miR-423-5p 1 0 0
chr7:141661603|141661806 hsa-miR-4529-3p 0 1 0
chr7:141661603|141661806 hsa-miR-518c-5p 1 1 0
chr7:141661603|141661806 hsa-miR-6515-3p 0 1 0
chr7:141661603|141661806 hsa-miR-16-5p 0 1 0
chr7:141661603|141661806 hsa-miR-6775-5p 1 0 0
chr7:141661603|141661806 hsa-miR-5001-5p 1 1 0
chr7:141661603|141661806 hsa-miR-6756-5p 1 0 0
chr7:141661603|141661806 hsa-miR-6769a-5p 1 0 0
chr7:141661603|141661806 hsa-miR-5189-5p 1 0 0
chr7:141661603|141661806 hsa-miR-3679-5p 1 1 0
chr7:141661603|141661806 hsa-miR-10400-3p 1 0 0
chr7:141661603|141661806 hsa-miR-363-5p 1 1 0
chr7:141661603|141661806 hsa-miR-4524a-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:141661603|141661806
ORF Type ORF1
Protein Length 53
Nucleotide Length 162
Protein Sequence LKFGLPEDRAIEVRAGWRSHSKSLHLDTNSLEALAAAPLGQHRFTGFQNLARI
Nucleotide Sequence CTGAAGTTTGGACTACCGGAGGATAGAGCAATTGAAGTTCGAGCAGGATGGAGAAGCCACTCTAAGTCTCTTCATCTGGACACGAATTCTCTGGAGGCATTAGCAGCAGCACCTCTGGGTCAACACAGATTTACTGGATTCCAAAATCTAGCAAGGATCTGA
CircID chr7:141661603|141661806
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MDYRRIEQLKFEQDGEATLSLFIWTRILWRH
Nucleotide Sequence TTGGACTACCGGAGGATAGAGCAATTGAAGTTCGAGCAGGATGGAGAAGCCACTCTAAGTCTCTTCATCTGGACACGAATTCTCTGGAGGCATTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab