CircRNA Information

General Information
circRNA Basic Information
CircID chr7:1430001|1430145
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCTCCTCTGAAAACGGGTCTGGGGGTAGCTGAGGTGCTGTGGGAAGGGCCAAGCCAGTTCCTGTGCATCGGGGCGGGGCTGGAGCAGGAGGCCTGGGCAGGGCAGATGGGGCGGCAGGGGTGAGGGGGCCCCACCATGGAAGCGG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:1430001|1430145 hsa-miR-370-5p 0 0 1
chr7:1430001|1430145 hsa-miR-370-3p 0 0 1
chr7:1430001|1430145 hsa-miR-328-5p 0 0 1
chr7:1430001|1430145 hsa-miR-328-3p 0 0 1
chr7:1430001|1430145 hsa-miR-766-5p 0 0 1
chr7:1430001|1430145 hsa-miR-766-3p 0 0 1
chr7:1430001|1430145 hsa-miR-874-5p 0 0 1
chr7:1430001|1430145 hsa-miR-874-3p 0 0 1
chr7:1430001|1430145 hsa-miR-892b 0 1 1
chr7:1430001|1430145 hsa-miR-541-5p 0 0 1
chr7:1430001|1430145 hsa-miR-541-3p 0 0 1
chr7:1430001|1430145 hsa-miR-873-5p 0 0 1
chr7:1430001|1430145 hsa-miR-873-3p 0 0 1
chr7:1430001|1430145 hsa-miR-1291 0 0 1
chr7:1430001|1430145 hsa-miR-296-5p 1 1 1
chr7:1430001|1430145 hsa-miR-146b-3p 1 0 1
chr7:1430001|1430145 hsa-miR-654-5p 0 0 1
chr7:1430001|1430145 hsa-miR-361-3p 0 1 1
chr7:1430001|1430145 hsa-miR-188-3p 0 0 1
chr7:1430001|1430145 hsa-miR-324-3p 1 0 1
chr7:1430001|1430145 hsa-miR-1260 0 0 1
chr7:1430001|1430145 hsa-miR-346 1 0 0
chr7:1430001|1430145 hsa-miR-1538 1 0 0
chr7:1430001|1430145 hsa-miR-1913 1 1 0
chr7:1430001|1430145 hsa-miR-1976 1 1 0
chr7:1430001|1430145 hsa-miR-718 1 0 0
chr7:1430001|1430145 hsa-miR-3142 1 0 0
chr7:1430001|1430145 hsa-miR-4313 1 1 0
chr7:1430001|1430145 hsa-miR-3972 1 0 0
chr7:1430001|1430145 hsa-miR-4641 1 0 0
chr7:1430001|1430145 hsa-miR-4686 1 0 0
chr7:1430001|1430145 hsa-miR-6749-3p 1 0 0
chr7:1430001|1430145 hsa-miR-18a-3p 1 1 0
chr7:1430001|1430145 hsa-miR-6747-3p 1 0 0
chr7:1430001|1430145 hsa-miR-4665-3p 1 0 0
chr7:1430001|1430145 hsa-miR-4726-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6836-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6720-5p 1 1 0
chr7:1430001|1430145 hsa-miR-6892-3p 1 0 0
chr7:1430001|1430145 hsa-miR-210-5p 1 0 0
chr7:1430001|1430145 hsa-miR-3189-5p 1 1 0
chr7:1430001|1430145 hsa-miR-6726-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6787-3p 1 1 0
chr7:1430001|1430145 hsa-miR-1915-5p 1 0 0
chr7:1430001|1430145 hsa-miR-6845-3p 1 0 0
chr7:1430001|1430145 hsa-miR-4725-5p 1 0 0
chr7:1430001|1430145 hsa-miR-6728-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6882-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6788-3p 1 0 0
chr7:1430001|1430145 hsa-miR-3934-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6884-3p 1 0 0
chr7:1430001|1430145 hsa-miR-4763-5p 1 1 0
chr7:1430001|1430145 hsa-miR-1247-5p 1 0 0
chr7:1430001|1430145 hsa-miR-1908-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6894-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6803-3p 1 0 0
chr7:1430001|1430145 hsa-miR-5001-3p 1 1 0
chr7:1430001|1430145 hsa-miR-7113-3p 1 1 0
chr7:1430001|1430145 hsa-miR-1266-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6786-3p 1 0 0
chr7:1430001|1430145 hsa-miR-339-5p 1 0 0
chr7:1430001|1430145 hsa-miR-6870-3p 1 0 0
chr7:1430001|1430145 hsa-miR-2115-5p 0 1 0
chr7:1430001|1430145 hsa-miR-1237-3p 1 1 0
chr7:1430001|1430145 hsa-miR-6743-3p 1 1 0
chr7:1430001|1430145 hsa-miR-345-5p 1 0 0
chr7:1430001|1430145 hsa-miR-7106-3p 1 1 0
chr7:1430001|1430145 hsa-miR-6785-3p 1 0 0
chr7:1430001|1430145 hsa-miR-4758-3p 1 0 0
chr7:1430001|1430145 hsa-miR-1910-5p 1 0 0
chr7:1430001|1430145 hsa-miR-6752-3p 1 1 0
chr7:1430001|1430145 hsa-miR-6872-3p 1 0 0
chr7:1430001|1430145 hsa-miR-4632-3p 1 1 0
chr7:1430001|1430145 hsa-miR-1914-5p 1 0 0
chr7:1430001|1430145 hsa-miR-6886-3p 1 1 0
chr7:1430001|1430145 hsa-miR-5591-3p 1 0 0
chr7:1430001|1430145 hsa-miR-4749-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6795-3p 1 1 0
chr7:1430001|1430145 hsa-miR-4649-3p 1 0 0
chr7:1430001|1430145 hsa-miR-1292-3p 1 0 0
chr7:1430001|1430145 hsa-miR-2277-5p 1 0 0
chr7:1430001|1430145 hsa-miR-6802-3p 0 1 0
chr7:1430001|1430145 hsa-miR-6748-3p 0 1 0
chr7:1430001|1430145 hsa-miR-6851-3p 1 1 0
chr7:1430001|1430145 hsa-miR-1229-3p 1 1 0
chr7:1430001|1430145 hsa-miR-3173-5p 1 1 0
chr7:1430001|1430145 hsa-miR-6734-3p 0 1 0
chr7:1430001|1430145 hsa-miR-6812-3p 1 0 0
chr7:1430001|1430145 hsa-miR-1249-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6790-3p 1 0 0
chr7:1430001|1430145 hsa-miR-3162-3p 1 0 0
chr7:1430001|1430145 hsa-miR-1228-3p 1 0 0
chr7:1430001|1430145 hsa-miR-4650-5p 0 1 0
chr7:1430001|1430145 hsa-miR-3127-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6754-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6799-3p 1 1 0
chr7:1430001|1430145 hsa-miR-6791-3p 0 1 0
chr7:1430001|1430145 hsa-miR-10398-5p 1 0 0
chr7:1430001|1430145 hsa-miR-4722-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6727-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6893-3p 1 1 0
chr7:1430001|1430145 hsa-miR-6511a-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6756-3p 1 1 0
chr7:1430001|1430145 hsa-miR-6784-3p 1 1 0
chr7:1430001|1430145 hsa-miR-6862-3p 1 1 0
chr7:1430001|1430145 hsa-miR-10401-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6801-3p 1 1 0
chr7:1430001|1430145 hsa-miR-6805-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6810-3p 1 1 0
chr7:1430001|1430145 hsa-miR-6829-3p 0 1 0
chr7:1430001|1430145 hsa-miR-6775-3p 1 0 0
chr7:1430001|1430145 hsa-miR-10392-3p 1 1 0
chr7:1430001|1430145 hsa-miR-4723-3p 1 0 0
chr7:1430001|1430145 hsa-miR-483-3p 1 1 0
chr7:1430001|1430145 hsa-miR-6511b-3p 1 0 0
chr7:1430001|1430145 hsa-miR-6512-3p 0 1 0
chr7:1430001|1430145 hsa-miR-3622b-3p 1 0 0
chr7:1430001|1430145 hsa-miR-412-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:1430001|1430145
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MKTGLGVAEVLWEGPSQFLCIGAGLEQEAWAGQMGRQG
Nucleotide Sequence CTGAAAACGGGTCTGGGGGTAGCTGAGGTGCTGTGGGAAGGGCCAAGCCAGTTCCTGTGCATCGGGGCGGGGCTGGAGCAGGAGGCCTGGGCAGGGCAGATGGGGCGGCAGGGGTGA
CircID chr7:1430001|1430145
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MRCCGKGQASSCASGRGWSRRPGQGRWGGRGEGAPPWKR
Nucleotide Sequence CTGAGGTGCTGTGGGAAGGGCCAAGCCAGTTCCTGTGCATCGGGGCGGGGCTGGAGCAGGAGGCCTGGGCAGGGCAGATGGGGCGGCAGGGGTGAGGGGGCCCCACCATGGAAGCGG
CircID chr7:1430001|1430145
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MPRPPAPAPPRCTGTGLALPTAPQLPPDPFSEE
Nucleotide Sequence CTGCCCAGGCCTCCTGCTCCAGCCCCGCCCCGATGCACAGGAACTGGCTTGGCCCTTCCCACAGCACCTCAGCTACCCCCAGACCCGTTTTCAGAGGAG
CircID chr7:1430001|1430145
ORF Type ORF4
Protein Length 39
Nucleotide Length 117
Protein Sequence MPPHLPCPGLLLQPRPDAQELAWPFPQHLSYPQTRFQRR
Nucleotide Sequence CTGCCGCCCCATCTGCCCTGCCCAGGCCTCCTGCTCCAGCCCCGCCCCGATGCACAGGAACTGGCTTGGCCCTTCCCACAGCACCTCAGCTACCCCCAGACCCGTTTTCAGAGGAGG
CircID chr7:1430001|1430145
ORF Type ORF5
Protein Length 45
Nucleotide Length 135
Protein Sequence MVGPPHPCRPICPAQASCSSPAPMHRNWLGPSHSTSATPRPVFRG
Nucleotide Sequence ATGGTGGGGCCCCCTCACCCCTGCCGCCCCATCTGCCCTGCCCAGGCCTCCTGCTCCAGCCCCGCCCCGATGCACAGGAACTGGCTTGGCCCTTCCCACAGCACCTCAGCTACCCCCAGACCCGTTTTCAGAGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab