CircRNA Information

General Information
circRNA Basic Information
CircID chr7:143389921|143390052
Strand +
CircType exon
Host Gene ENSG00000159840.14;
Algorism CIRI2;
Sequence CTCCCAGTTAGTAAGCAGCATCTCCCGCCACCTCCTGGTCAGAACCTGCCCAAGGAGTCCAGAGGGATGGCTGACCTCACACTTGTAACACTTCATGTGGAAGTTCTTGTCCAGGGCGACCACTCGCACAGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:143389921|143390052 hsa-miR-422a 0 1 1
chr7:143389921|143390052 hsa-miR-573 0 0 1
chr7:143389921|143390052 hsa-miR-595 0 0 1
chr7:143389921|143390052 hsa-miR-635 0 0 1
chr7:143389921|143390052 hsa-miR-657 0 1 1
chr7:143389921|143390052 hsa-miR-665 0 1 1
chr7:143389921|143390052 hsa-miR-1294 0 1 1
chr7:143389921|143390052 hsa-miR-1249-5p 0 0 1
chr7:143389921|143390052 hsa-miR-1249-3p 0 0 1
chr7:143389921|143390052 hsa-miR-582-3p 0 0 1
chr7:143389921|143390052 hsa-miR-642 0 0 1
chr7:143389921|143390052 hsa-miR-378 0 0 1
chr7:143389921|143390052 hsa-miR-663 0 0 1
chr7:143389921|143390052 hsa-miR-612 0 1 0
chr7:143389921|143390052 hsa-miR-378b 0 1 0
chr7:143389921|143390052 hsa-miR-1268b 1 0 0
chr7:143389921|143390052 hsa-miR-378h 0 1 0
chr7:143389921|143390052 hsa-miR-4525 0 1 0
chr7:143389921|143390052 hsa-miR-4736 0 1 0
chr7:143389921|143390052 hsa-miR-6134 0 1 0
chr7:143389921|143390052 hsa-miR-9718 1 0 0
chr7:143389921|143390052 hsa-miR-9986 0 1 0
chr7:143389921|143390052 hsa-miR-122-5p 0 1 0
chr7:143389921|143390052 hsa-miR-6799-5p 1 0 0
chr7:143389921|143390052 hsa-miR-6721-5p 0 1 0
chr7:143389921|143390052 hsa-miR-6817-3p 0 1 0
chr7:143389921|143390052 hsa-miR-1229-5p 1 1 0
chr7:143389921|143390052 hsa-miR-30c-2-3p 1 1 0
chr7:143389921|143390052 hsa-miR-2276-5p 0 1 0
chr7:143389921|143390052 hsa-miR-6513-3p 0 1 0
chr7:143389921|143390052 hsa-miR-518c-5p 0 1 0
chr7:143389921|143390052 hsa-miR-1207-5p 1 0 0
chr7:143389921|143390052 hsa-miR-4763-3p 1 0 0
chr7:143389921|143390052 hsa-miR-6787-5p 1 0 0
chr7:143389921|143390052 hsa-miR-6865-5p 0 1 0
chr7:143389921|143390052 hsa-miR-6756-5p 1 0 0
chr7:143389921|143390052 hsa-miR-6803-5p 1 0 0
chr7:143389921|143390052 hsa-miR-6815-5p 0 1 0
chr7:143389921|143390052 hsa-miR-6851-5p 0 1 0
chr7:143389921|143390052 hsa-miR-7110-5p 1 0 0
chr7:143389921|143390052 hsa-miR-6774-5p 0 1 0
chr7:143389921|143390052 hsa-miR-6879-5p 1 0 0
chr7:143389921|143390052 hsa-miR-30c-1-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:143389921|143390052
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MPKESRGMADLTLVTLHVEVLVQGDHSHS
Nucleotide Sequence CTGCCCAAGGAGTCCAGAGGGATGGCTGACCTCACACTTGTAACACTTCATGTGGAAGTTCTTGTCCAGGGCGACCACTCGCACAGT

CircID chr7:143389921|143390052
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MDKNFHMKCYKCEVSHPSGLLGQVLTRRWREMLLTNWE
Nucleotide Sequence CTGGACAAGAACTTCCACATGAAGTGTTACAAGTGTGAGGTCAGCCATCCCTCTGGACTCCTTGGGCAGGTTCTGACCAGGAGGTGGCGGGAGATGCTGCTTACTAACTGGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites