CircRNA Information

General Information
circRNA Basic Information
CircID chr7:149003118|149003314
Strand -
CircType exon
Host Gene ENSG00000155660.9;
Algorism CIRI2;
Sequence CACCCCGCAGTATCTGCCTCTGGGTCCAGGGTCCTTTCTGCTCCGGCACTGGGGGCTCTCAAGAGGTGGGGCTGCCACGTGGGTGGCCTCTCCCTGGAGCTGAGCCCACCCTGGGGGACCCTGGATCATGCCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:149003118|149003314 hsa-miR-484 0 0 1
chr7:149003118|149003314 hsa-miR-526b-5p 0 0 1
chr7:149003118|149003314 hsa-miR-526b-3p 0 0 1
chr7:149003118|149003314 hsa-miR-504-5p 0 0 1
chr7:149003118|149003314 hsa-miR-504-3p 0 0 1
chr7:149003118|149003314 hsa-miR-612 0 1 1
chr7:149003118|149003314 hsa-miR-637 1 1 1
chr7:149003118|149003314 hsa-miR-640 0 1 1
chr7:149003118|149003314 hsa-miR-662 0 1 1
chr7:149003118|149003314 hsa-miR-541-5p 0 0 1
chr7:149003118|149003314 hsa-miR-541-3p 0 0 1
chr7:149003118|149003314 hsa-miR-744-5p 0 0 1
chr7:149003118|149003314 hsa-miR-744-3p 0 0 1
chr7:149003118|149003314 hsa-miR-1203 0 1 1
chr7:149003118|149003314 hsa-miR-1825 0 0 1
chr7:149003118|149003314 hsa-miR-1827 0 0 1
chr7:149003118|149003314 hsa-miR-1225-3p 1 1 1
chr7:149003118|149003314 hsa-miR-885-3p 0 0 1
chr7:149003118|149003314 hsa-miR-654-5p 0 0 1
chr7:149003118|149003314 hsa-miR-361-3p 0 1 1
chr7:149003118|149003314 hsa-miR-1224-3p 0 0 1
chr7:149003118|149003314 hsa-miR-1285 0 0 1
chr7:149003118|149003314 hsa-miR-24 0 0 1
chr7:149003118|149003314 hsa-miR-371-3p 0 0 1
chr7:149003118|149003314 hsa-miR-422a 0 1 0
chr7:149003118|149003314 hsa-miR-608 1 0 0
chr7:149003118|149003314 hsa-miR-762 1 1 0
chr7:149003118|149003314 hsa-miR-711 0 1 0
chr7:149003118|149003314 hsa-miR-378b 1 1 0
chr7:149003118|149003314 hsa-miR-378c 1 1 0
chr7:149003118|149003314 hsa-miR-4322 1 1 0
chr7:149003118|149003314 hsa-miR-4253 0 1 0
chr7:149003118|149003314 hsa-miR-4265 1 1 0
chr7:149003118|149003314 hsa-miR-3907 1 0 0
chr7:149003118|149003314 hsa-miR-3943 0 1 0
chr7:149003118|149003314 hsa-miR-378e 0 1 0
chr7:149003118|149003314 hsa-miR-378f 0 1 0
chr7:149003118|149003314 hsa-miR-378h 0 1 0
chr7:149003118|149003314 hsa-miR-4468 0 1 0
chr7:149003118|149003314 hsa-miR-4488 1 0 0
chr7:149003118|149003314 hsa-miR-4492 1 1 0
chr7:149003118|149003314 hsa-miR-4498 0 1 0
chr7:149003118|149003314 hsa-miR-4505 0 1 0
chr7:149003118|149003314 hsa-miR-378i 0 1 0
chr7:149003118|149003314 hsa-miR-4651 1 0 0
chr7:149003118|149003314 hsa-miR-4656 1 0 0
chr7:149003118|149003314 hsa-miR-4688 1 0 0
chr7:149003118|149003314 hsa-miR-5090 1 0 0
chr7:149003118|149003314 hsa-miR-5787 1 1 0
chr7:149003118|149003314 hsa-miR-6081 0 1 0
chr7:149003118|149003314 hsa-miR-6860 0 1 0
chr7:149003118|149003314 hsa-miR-4731-5p 0 1 0
chr7:149003118|149003314 hsa-miR-6840-3p 1 0 0
chr7:149003118|149003314 hsa-miR-27a-5p 0 1 0
chr7:149003118|149003314 hsa-miR-24-3p 0 1 0
chr7:149003118|149003314 hsa-miR-3189-5p 1 0 0
chr7:149003118|149003314 hsa-miR-23a-5p 0 1 0
chr7:149003118|149003314 hsa-miR-6782-5p 1 0 0
chr7:149003118|149003314 hsa-miR-1909-5p 1 0 0
chr7:149003118|149003314 hsa-miR-3944-3p 1 0 0
chr7:149003118|149003314 hsa-miR-7113-3p 0 1 0
chr7:149003118|149003314 hsa-miR-3690 1 1 0
chr7:149003118|149003314 hsa-miR-4446-3p 0 1 0
chr7:149003118|149003314 hsa-miR-7112-5p 1 0 0
chr7:149003118|149003314 hsa-miR-7160-3p 1 0 0
chr7:149003118|149003314 hsa-miR-664b-5p 1 0 0
chr7:149003118|149003314 hsa-miR-4758-3p 0 1 0
chr7:149003118|149003314 hsa-miR-6778-3p 0 1 0
chr7:149003118|149003314 hsa-miR-6814-5p 1 0 0
chr7:149003118|149003314 hsa-miR-7113-5p 0 1 0
chr7:149003118|149003314 hsa-miR-6816-3p 0 1 0
chr7:149003118|149003314 hsa-miR-6775-5p 1 0 0
chr7:149003118|149003314 hsa-miR-1343-5p 1 0 0
chr7:149003118|149003314 hsa-miR-5001-5p 1 1 0
chr7:149003118|149003314 hsa-miR-6743-5p 0 1 0
chr7:149003118|149003314 hsa-miR-6756-5p 1 1 0
chr7:149003118|149003314 hsa-miR-6803-5p 1 0 0
chr7:149003118|149003314 hsa-miR-6813-5p 1 1 0
chr7:149003118|149003314 hsa-miR-1915-3p 1 0 0
chr7:149003118|149003314 hsa-miR-3620-5p 1 0 0
chr7:149003118|149003314 hsa-miR-5189-5p 0 1 0
chr7:149003118|149003314 hsa-miR-5196-5p 1 0 0
chr7:149003118|149003314 hsa-miR-10526-3p 0 1 0
chr7:149003118|149003314 hsa-miR-328-5p 1 0 0
chr7:149003118|149003314 hsa-miR-4685-5p 1 0 0
chr7:149003118|149003314 hsa-miR-675-5p 1 0 0
chr7:149003118|149003314 hsa-miR-6848-5p 1 0 0
chr7:149003118|149003314 hsa-miR-3187-5p 0 1 0
chr7:149003118|149003314 hsa-miR-6511a-5p 0 1 0
chr7:149003118|149003314 hsa-miR-378a-3p 0 1 0
chr7:149003118|149003314 hsa-miR-6766-5p 0 1 0
chr7:149003118|149003314 hsa-miR-6724-5p 1 0 0
chr7:149003118|149003314 hsa-miR-6791-5p 1 0 0
chr7:149003118|149003314 hsa-miR-6764-5p 0 1 0
chr7:149003118|149003314 hsa-miR-378d 0 1 0
chr7:149003118|149003314 hsa-miR-1912-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:149003118|149003314
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MGALKRWGCHVGGLSLELSPPWGTLDHAPLPPALGLQGGRLAMPSLKQH
Nucleotide Sequence CTGGGGGCTCTCAAGAGGTGGGGCTGCCACGTGGGTGGCCTCTCCCTGGAGCTGAGCCCACCCTGGGGGACCCTGGATCATGCCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCAC
CircID chr7:149003118|149003314
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MPLGPGSFLLRHWGLSRGGAATWVASPWS
Nucleotide Sequence CTGCCTCTGGGTCCAGGGTCCTTTCTGCTCCGGCACTGGGGGCTCTCAAGAGGTGGGGCTGCCACGTGGGTGGCCTCTCCCTGGAGCTGA
CircID chr7:149003118|149003314
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MPRGWPLPGAEPTLGDPGSCPFAPSPWFAGRPPGDAQPETAP
Nucleotide Sequence CTGCCACGTGGGTGGCCTCTCCCTGGAGCTGAGCCCACCCTGGGGGACCCTGGATCATGCCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCC
CircID chr7:149003118|149003314
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MGAKGHDPGSPRVGSAPGRGHPRGSPTS
Nucleotide Sequence CTGGGGGCAAAGGGGCATGATCCAGGGTCCCCCAGGGTGGGCTCAGCTCCAGGGAGAGGCCACCCACGTGGCAGCCCCACCTCTTGA
CircID chr7:149003118|149003314
ORF Type ORF5
Protein Length 64
Nucleotide Length 192
Protein Sequence MFQAGHRQAASLQTKGWGQRGMIQGPPGWAQLQGEATHVAAPPLESPQCRSRKDPGPRGRYCGV
Nucleotide Sequence CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCAGGGTCCCCCAGGGTGGGCTCAGCTCCAGGGAGAGGCCACCCACGTGGCAGCCCCACCTCTTGAGAGCCCCCAGTGCCGGAGCAGAAAGGACCCTGGACCCAGAGGCAGATACTGCGGGGTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab