CircRNA Information

General Information
circRNA Basic Information
CircID chr7:149880084|149880296
Strand +
CircType exon
Host Gene ENSG00000171130.16;
Algorism CIRI2;
Sequence CCCTGCGTGTTGCTTCCCACTCCTGCCAGGCTGGCACGCCCCCATTCTTCACCATCCCTAGCACAGAGCCCAGGGCCAGGGGGCAGAGGGCGGGGCTGGCTCAGGAGCAGGGCTGGCCCGTCCCATAGCGCCACTCACATTGCCCCTTCCCCTCTCTCATCCCAGCTCTGGTCACTTAGATGCTGCCATGAGAGGCTCTGAAATCCACCCCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:149880084|149880296 hsa-miR-107 0 1 1
chr7:149880084|149880296 hsa-miR-328-5p 0 0 1
chr7:149880084|149880296 hsa-miR-328-3p 0 0 1
chr7:149880084|149880296 hsa-miR-608 1 1 1
chr7:149880084|149880296 hsa-miR-760 1 1 1
chr7:149880084|149880296 hsa-miR-1200 0 1 1
chr7:149880084|149880296 hsa-miR-1202 0 1 1
chr7:149880084|149880296 hsa-miR-1290 0 0 1
chr7:149880084|149880296 hsa-miR-1291 1 1 1
chr7:149880084|149880296 hsa-miR-1255a 0 0 1
chr7:149880084|149880296 hsa-miR-885-3p 0 0 1
chr7:149880084|149880296 hsa-miR-331-3p 1 1 1
chr7:149880084|149880296 hsa-miR-1207-5p 0 0 1
chr7:149880084|149880296 hsa-miR-324-3p 0 0 1
chr7:149880084|149880296 hsa-miR-876-5p 0 0 1
chr7:149880084|149880296 hsa-miR-103 0 0 1
chr7:149880084|149880296 hsa-miR-1255b 0 0 1
chr7:149880084|149880296 hsa-miR-1268 0 0 1
chr7:149880084|149880296 hsa-miR-762 1 0 0
chr7:149880084|149880296 hsa-miR-1538 1 0 0
chr7:149880084|149880296 hsa-miR-1913 0 1 0
chr7:149880084|149880296 hsa-miR-2861 1 0 0
chr7:149880084|149880296 hsa-miR-3167 0 1 0
chr7:149880084|149880296 hsa-miR-1193 0 1 0
chr7:149880084|149880296 hsa-miR-4313 1 1 0
chr7:149880084|149880296 hsa-miR-4322 1 0 0
chr7:149880084|149880296 hsa-miR-4281 1 0 0
chr7:149880084|149880296 hsa-miR-4292 1 0 0
chr7:149880084|149880296 hsa-miR-4440 1 0 0
chr7:149880084|149880296 hsa-miR-4449 1 0 0
chr7:149880084|149880296 hsa-miR-4487 0 1 0
chr7:149880084|149880296 hsa-miR-1587 1 0 0
chr7:149880084|149880296 hsa-miR-3972 0 1 0
chr7:149880084|149880296 hsa-miR-4651 1 0 0
chr7:149880084|149880296 hsa-miR-4674 1 0 0
chr7:149880084|149880296 hsa-miR-5572 1 0 0
chr7:149880084|149880296 hsa-miR-6860 1 0 0
chr7:149880084|149880296 hsa-miR-7150 0 1 0
chr7:149880084|149880296 hsa-miR-8057 1 0 0
chr7:149880084|149880296 hsa-miR-8073 1 1 0
chr7:149880084|149880296 hsa-miR-8089 1 0 0
chr7:149880084|149880296 hsa-miR-12128 1 0 0
chr7:149880084|149880296 hsa-miR-135a-3p 1 0 0
chr7:149880084|149880296 hsa-miR-4433b-3p 1 1 0
chr7:149880084|149880296 hsa-miR-3194-3p 1 0 0
chr7:149880084|149880296 hsa-miR-4433a-3p 0 1 0
chr7:149880084|149880296 hsa-miR-6825-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6857-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6720-5p 0 1 0
chr7:149880084|149880296 hsa-miR-27a-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6728-5p 1 1 0
chr7:149880084|149880296 hsa-miR-5187-5p 0 1 0
chr7:149880084|149880296 hsa-miR-6757-5p 1 1 0
chr7:149880084|149880296 hsa-miR-3187-3p 1 0 0
chr7:149880084|149880296 hsa-miR-8069 1 0 0
chr7:149880084|149880296 hsa-miR-6776-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6793-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6732-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6805-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6782-5p 1 1 0
chr7:149880084|149880296 hsa-miR-3194-5p 0 1 0
chr7:149880084|149880296 hsa-miR-6858-3p 0 1 0
chr7:149880084|149880296 hsa-miR-939-3p 1 1 0
chr7:149880084|149880296 hsa-miR-6772-3p 0 1 0
chr7:149880084|149880296 hsa-miR-1226-5p 0 1 0
chr7:149880084|149880296 hsa-miR-6740-5p 1 0 0
chr7:149880084|149880296 hsa-miR-7108-3p 0 1 0
chr7:149880084|149880296 hsa-miR-6784-5p 1 0 0
chr7:149880084|149880296 hsa-miR-3127-5p 1 0 0
chr7:149880084|149880296 hsa-miR-7113-3p 0 1 0
chr7:149880084|149880296 hsa-miR-92b-5p 0 1 0
chr7:149880084|149880296 hsa-miR-3677-3p 1 0 0
chr7:149880084|149880296 hsa-miR-103a-3p 0 1 0
chr7:149880084|149880296 hsa-miR-6789-5p 1 0 0
chr7:149880084|149880296 hsa-miR-3162-5p 1 0 0
chr7:149880084|149880296 hsa-miR-3189-3p 1 0 0
chr7:149880084|149880296 hsa-miR-1237-3p 0 1 0
chr7:149880084|149880296 hsa-miR-4727-3p 1 0 0
chr7:149880084|149880296 hsa-miR-2276-5p 0 1 0
chr7:149880084|149880296 hsa-miR-6868-5p 0 1 0
chr7:149880084|149880296 hsa-miR-3173-5p 0 1 0
chr7:149880084|149880296 hsa-miR-6779-3p 0 1 0
chr7:149880084|149880296 hsa-miR-6838-3p 0 1 0
chr7:149880084|149880296 hsa-miR-4763-3p 1 0 0
chr7:149880084|149880296 hsa-miR-6778-5p 0 1 0
chr7:149880084|149880296 hsa-miR-6812-5p 1 1 0
chr7:149880084|149880296 hsa-miR-6816-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6737-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6743-5p 1 1 0
chr7:149880084|149880296 hsa-miR-6752-5p 1 1 0
chr7:149880084|149880296 hsa-miR-6756-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6803-5p 0 1 0
chr7:149880084|149880296 hsa-miR-6819-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6842-5p 0 1 0
chr7:149880084|149880296 hsa-miR-7107-5p 1 1 0
chr7:149880084|149880296 hsa-miR-10401-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6751-5p 0 1 0
chr7:149880084|149880296 hsa-miR-3620-5p 1 0 0
chr7:149880084|149880296 hsa-miR-4728-5p 1 0 0
chr7:149880084|149880296 hsa-miR-5189-5p 1 0 0
chr7:149880084|149880296 hsa-miR-5196-5p 0 1 0
chr7:149880084|149880296 hsa-miR-6780b-5p 1 1 0
chr7:149880084|149880296 hsa-miR-4685-5p 1 1 0
chr7:149880084|149880296 hsa-miR-4725-3p 0 1 0
chr7:149880084|149880296 hsa-miR-4745-5p 0 1 0
chr7:149880084|149880296 hsa-miR-3187-5p 1 0 0
chr7:149880084|149880296 hsa-miR-4758-5p 1 1 0
chr7:149880084|149880296 hsa-miR-4769-5p 0 1 0
chr7:149880084|149880296 hsa-miR-6758-5p 0 1 0
chr7:149880084|149880296 hsa-miR-6856-5p 0 1 0
chr7:149880084|149880296 hsa-miR-6799-3p 0 1 0
chr7:149880084|149880296 hsa-miR-1199-5p 0 1 0
chr7:149880084|149880296 hsa-miR-4700-5p 1 0 0
chr7:149880084|149880296 hsa-miR-6791-5p 1 1 0
chr7:149880084|149880296 hsa-miR-320a-3p 1 1 0
chr7:149880084|149880296 hsa-miR-320b 1 1 0
chr7:149880084|149880296 hsa-miR-6775-3p 1 1 0
chr7:149880084|149880296 hsa-miR-10392-3p 0 1 0
chr7:149880084|149880296 hsa-miR-6751-3p 0 1 0
chr7:149880084|149880296 hsa-miR-6823-3p 0 1 0
chr7:149880084|149880296 hsa-miR-330-5p 1 1 0
chr7:149880084|149880296 hsa-miR-619-5p 0 1 0
chr7:149880084|149880296 hsa-miR-7157-3p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:149880084|149880296
ORF Type ORF1
Protein Length 63
Nucleotide Length 192
Protein Sequence MLPTPARLARPHSSPSLAQSPGPGGRGRGWLRSRAGPSHSATHIAPSPLSSQLWSLRCCHERL
Nucleotide Sequence TTGCTTCCCACTCCTGCCAGGCTGGCACGCCCCCATTCTTCACCATCCCTAGCACAGAGCCCAGGGCCAGGGGGCAGAGGGCGGGGCTGGCTCAGGAGCAGGGCTGGCCCGTCCCATAGCGCCACTCACATTGCCCCTTCCCCTCTCTCATCCCAGCTCTGGTCACTTAGATGCTGCCATGAGAGGCTCTGA
CircID chr7:149880084|149880296
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MARPIAPLTLPLPLSHPSSGHLDAAMRGSEIHP
Nucleotide Sequence CTGGCCCGTCCCATAGCGCCACTCACATTGCCCCTTCCCCTCTCTCATCCCAGCTCTGGTCACTTAGATGCTGCCATGAGAGGCTCTGAAATCCACCCC
CircID chr7:149880084|149880296
ORF Type ORF3
Protein Length 41
Nucleotide Length 126
Protein Sequence LRVASHSCQAGTPPFFTIPSTEPRARGQRAGLAQEQGWPVP
Nucleotide Sequence CTGCGTGTTGCTTCCCACTCCTGCCAGGCTGGCACGCCCCCATTCTTCACCATCCCTAGCACAGAGCCCAGGGCCAGGGGGCAGAGGGCGGGGCTGGCTCAGGAGCAGGGCTGGCCCGTCCCATAG
CircID chr7:149880084|149880296
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MLLSQPRPLPPGPGLCARDGEEWGRASLAGVGSNTQ
Nucleotide Sequence CTGCTCCTGAGCCAGCCCCGCCCTCTGCCCCCTGGCCCTGGGCTCTGTGCTAGGGATGGTGAAGAATGGGGGCGTGCCAGCCTGGCAGGAGTGGGAAGCAACACGCAG
CircID chr7:149880084|149880296
ORF Type ORF5
Protein Length 26
Nucleotide Length 78
Protein Sequence MALGSVLGMVKNGGVPAWQEWEATRR
Nucleotide Sequence CTGGCCCTGGGCTCTGTGCTAGGGATGGTGAAGAATGGGGGCGTGCCAGCCTGGCAGGAGTGGGAAGCAACACGCAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab