CircRNA Information

General Information
circRNA Basic Information
CircID chr7:150371983|150372234
Strand -
CircType exon
Host Gene ENSG00000214022.10;
Algorism CIRI2;
Sequence AAGCCCAACTTGATCGCTCACCGCCGCGTGCACACGGGCGAGCGGCCCCACCAGTGCCCCGAGTGCGGGAAGCGCTTTACCAATAAGCCCTATCTGACTTCGCACCGGCGCATCCACACCGGCGAGAAGCCCTACCCGTGCAAAGAGTGCGGCCGCCGCTTCCGGCACAAACCCAACCTGCTGTCTCACAGCAAGATTCACAAGCGATCCGAGGGGTCGGCCCAGGCCGCCCCCGGCCCGGGGAGCCCCCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:150371983|150372234 hsa-miR-214-5p 0 0 1
chr7:150371983|150372234 hsa-miR-214-3p 0 0 1
chr7:150371983|150372234 hsa-miR-518f-5p 0 0 1
chr7:150371983|150372234 hsa-miR-518f-3p 0 0 1
chr7:150371983|150372234 hsa-miR-518b 0 1 1
chr7:150371983|150372234 hsa-miR-518c-5p 0 0 1
chr7:150371983|150372234 hsa-miR-518c-3p 0 0 1
chr7:150371983|150372234 hsa-miR-518e-5p 0 0 1
chr7:150371983|150372234 hsa-miR-518e-3p 0 0 1
chr7:150371983|150372234 hsa-miR-507 0 0 1
chr7:150371983|150372234 hsa-miR-557 1 1 1
chr7:150371983|150372234 hsa-miR-629-5p 0 0 1
chr7:150371983|150372234 hsa-miR-629-3p 0 0 1
chr7:150371983|150372234 hsa-miR-637 0 1 1
chr7:150371983|150372234 hsa-miR-661 0 0 1
chr7:150371983|150372234 hsa-miR-657 0 0 1
chr7:150371983|150372234 hsa-miR-541-5p 0 0 1
chr7:150371983|150372234 hsa-miR-541-3p 0 0 1
chr7:150371983|150372234 hsa-miR-1234-3p 0 0 1
chr7:150371983|150372234 hsa-miR-1257 0 0 1
chr7:150371983|150372234 hsa-miR-1234 0 0 1
chr7:150371983|150372234 hsa-miR-127-3p 0 0 1
chr7:150371983|150372234 hsa-miR-654-5p 0 0 1
chr7:150371983|150372234 hsa-miR-518a-3p 0 1 1
chr7:150371983|150372234 hsa-miR-518d-3p 0 1 1
chr7:150371983|150372234 hsa-miR-608 0 1 0
chr7:150371983|150372234 hsa-miR-638 1 0 0
chr7:150371983|150372234 hsa-miR-663a 1 0 0
chr7:150371983|150372234 hsa-miR-762 1 1 0
chr7:150371983|150372234 hsa-miR-940 1 0 0
chr7:150371983|150372234 hsa-miR-3147 1 0 0
chr7:150371983|150372234 hsa-miR-3196 1 1 0
chr7:150371983|150372234 hsa-miR-4298 1 0 0
chr7:150371983|150372234 hsa-miR-4292 0 1 0
chr7:150371983|150372234 hsa-miR-3911 1 1 0
chr7:150371983|150372234 hsa-miR-4467 1 0 0
chr7:150371983|150372234 hsa-miR-4488 0 1 0
chr7:150371983|150372234 hsa-miR-4507 1 0 0
chr7:150371983|150372234 hsa-miR-3960 1 1 0
chr7:150371983|150372234 hsa-miR-4651 1 0 0
chr7:150371983|150372234 hsa-miR-4706 1 0 0
chr7:150371983|150372234 hsa-miR-4741 1 0 0
chr7:150371983|150372234 hsa-miR-4767 1 0 0
chr7:150371983|150372234 hsa-miR-5090 0 1 0
chr7:150371983|150372234 hsa-miR-8072 1 1 0
chr7:150371983|150372234 hsa-miR-92a-1-5p 1 1 0
chr7:150371983|150372234 hsa-miR-128-1-5p 0 1 0
chr7:150371983|150372234 hsa-miR-4665-3p 1 0 0
chr7:150371983|150372234 hsa-miR-6727-5p 1 1 0
chr7:150371983|150372234 hsa-miR-6759-5p 1 0 0
chr7:150371983|150372234 hsa-miR-23a-5p 0 1 0
chr7:150371983|150372234 hsa-miR-3126-5p 1 0 0
chr7:150371983|150372234 hsa-miR-6786-5p 1 0 0
chr7:150371983|150372234 hsa-miR-939-3p 0 1 0
chr7:150371983|150372234 hsa-miR-1229-5p 1 0 0
chr7:150371983|150372234 hsa-miR-1908-3p 1 0 0
chr7:150371983|150372234 hsa-miR-937-5p 1 0 0
chr7:150371983|150372234 hsa-miR-6742-3p 0 1 0
chr7:150371983|150372234 hsa-miR-6781-5p 0 1 0
chr7:150371983|150372234 hsa-miR-6743-3p 0 1 0
chr7:150371983|150372234 hsa-miR-3158-3p 0 1 0
chr7:150371983|150372234 hsa-miR-5587-3p 0 1 0
chr7:150371983|150372234 hsa-miR-10400-5p 1 0 0
chr7:150371983|150372234 hsa-miR-1233-5p 1 0 0
chr7:150371983|150372234 hsa-miR-6816-5p 0 1 0
chr7:150371983|150372234 hsa-miR-6775-5p 1 1 0
chr7:150371983|150372234 hsa-miR-1343-5p 1 0 0
chr7:150371983|150372234 hsa-miR-5001-5p 1 0 0
chr7:150371983|150372234 hsa-miR-6756-5p 1 0 0
chr7:150371983|150372234 hsa-miR-6803-5p 1 0 0
chr7:150371983|150372234 hsa-miR-7107-5p 0 1 0
chr7:150371983|150372234 hsa-miR-6722-3p 1 0 0
chr7:150371983|150372234 hsa-miR-3620-5p 1 0 0
chr7:150371983|150372234 hsa-miR-10396a-5p 1 0 0
chr7:150371983|150372234 hsa-miR-10396b-5p 1 0 0
chr7:150371983|150372234 hsa-miR-1237-5p 0 1 0
chr7:150371983|150372234 hsa-miR-4745-5p 1 0 0
chr7:150371983|150372234 hsa-miR-675-5p 1 0 0
chr7:150371983|150372234 hsa-miR-10394-3p 1 0 0
chr7:150371983|150372234 hsa-miR-6785-5p 1 0 0
chr7:150371983|150372234 hsa-miR-3619-5p 0 1 0
chr7:150371983|150372234 hsa-miR-526a-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:150371983|150372234
ORF Type ORF1
Protein Length 81
Nucleotide Length 243
Protein Sequence MIAHRRVHTGERPHQCPECGKRFTNKPYLTSHRRIHTGEKPYPCKECGRRFRHKPNLLSHSKIHKRSEGSAQAAPGPGSPQ
Nucleotide Sequence TTGATCGCTCACCGCCGCGTGCACACGGGCGAGCGGCCCCACCAGTGCCCCGAGTGCGGGAAGCGCTTTACCAATAAGCCCTATCTGACTTCGCACCGGCGCATCCACACCGGCGAGAAGCCCTACCCGTGCAAAGAGTGCGGCCGCCGCTTCCGGCACAAACCCAACCTGCTGTCTCACAGCAAGATTCACAAGCGATCCGAGGGGTCGGCCCAGGCCGCCCCCGGCCCGGGGAGCCCCCAG
CircID chr7:150371983|150372234
ORF Type ORF2
Protein Length 84
Nucleotide Length 252
Protein Sequence LGAPRAGGGLGRPLGSLVNLAVRQQVGFVPEAAAALFARVGLLAGVDAPVRSQIGLIGKALPALGALVGPLARVHAAVSDQVGL
Nucleotide Sequence CTGGGGGCTCCCCGGGCCGGGGGCGGCCTGGGCCGACCCCTCGGATCGCTTGTGAATCTTGCTGTGAGACAGCAGGTTGGGTTTGTGCCGGAAGCGGCGGCCGCACTCTTTGCACGGGTAGGGCTTCTCGCCGGTGTGGATGCGCCGGTGCGAAGTCAGATAGGGCTTATTGGTAAAGCGCTTCCCGCACTCGGGGCACTGGTGGGGCCGCTCGCCCGTGTGCACGCGGCGGTGAGCGATCAAGTTGGGCTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab