CircRNA Information

General Information
circRNA Basic Information
CircID chr7:150627616|150627850
Strand -
CircType exon
Host Gene ENSG00000133561.14;
Algorism CIRI2;
Sequence CTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAACAGAGGGCTGGACACAGGGGGGTGCAAAGGCTGATGGTGTCCTTGGCTCAAGTCCAGCACAGGCTCAAAGGTCAGCCTTCCCCAGCAGGCATCTGTGGGCTTCCTCAGATTCCTTCTGGATCTGGGACAGTCCTTCCAGCCAAGACTCCTCACCAGGCACGTCCTCAGAGCCTTGGCCCTGGCTTACTTGCCTTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:150627616|150627850 hsa-miR-198 0 0 1
chr7:150627616|150627850 hsa-miR-122-5p 0 0 1
chr7:150627616|150627850 hsa-miR-122-3p 0 0 1
chr7:150627616|150627850 hsa-miR-370-5p 0 0 1
chr7:150627616|150627850 hsa-miR-370-3p 0 0 1
chr7:150627616|150627850 hsa-miR-422a 0 1 1
chr7:150627616|150627850 hsa-miR-520f-5p 0 0 1
chr7:150627616|150627850 hsa-miR-520f-3p 0 0 1
chr7:150627616|150627850 hsa-miR-507 0 1 1
chr7:150627616|150627850 hsa-miR-557 0 0 1
chr7:150627616|150627850 hsa-miR-587 0 0 1
chr7:150627616|150627850 hsa-miR-647 0 0 1
chr7:150627616|150627850 hsa-miR-661 1 0 1
chr7:150627616|150627850 hsa-miR-766-5p 0 0 1
chr7:150627616|150627850 hsa-miR-766-3p 0 0 1
chr7:150627616|150627850 hsa-miR-760 1 1 1
chr7:150627616|150627850 hsa-miR-924 0 0 1
chr7:150627616|150627850 hsa-miR-1287-5p 0 0 1
chr7:150627616|150627850 hsa-miR-1287-3p 0 0 1
chr7:150627616|150627850 hsa-miR-1252-5p 0 0 1
chr7:150627616|150627850 hsa-miR-1252-3p 0 0 1
chr7:150627616|150627850 hsa-miR-1197 0 0 1
chr7:150627616|150627850 hsa-miR-671-5p 1 1 1
chr7:150627616|150627850 hsa-miR-1224-5p 0 0 1
chr7:150627616|150627850 hsa-miR-516a-3p 0 0 1
chr7:150627616|150627850 hsa-miR-550 0 0 1
chr7:150627616|150627850 hsa-miR-378 0 0 1
chr7:150627616|150627850 hsa-miR-1254 0 0 1
chr7:150627616|150627850 hsa-miR-1182 1 0 0
chr7:150627616|150627850 hsa-miR-1268a 1 0 0
chr7:150627616|150627850 hsa-miR-2110 0 1 0
chr7:150627616|150627850 hsa-miR-378b 0 1 0
chr7:150627616|150627850 hsa-miR-3169 0 1 0
chr7:150627616|150627850 hsa-miR-3181 1 0 0
chr7:150627616|150627850 hsa-miR-378c 0 1 0
chr7:150627616|150627850 hsa-miR-4290 1 0 0
chr7:150627616|150627850 hsa-miR-3921 0 1 0
chr7:150627616|150627850 hsa-miR-3929 0 1 0
chr7:150627616|150627850 hsa-miR-1268b 1 0 0
chr7:150627616|150627850 hsa-miR-378e 0 1 0
chr7:150627616|150627850 hsa-miR-378f 0 1 0
chr7:150627616|150627850 hsa-miR-378h 0 1 0
chr7:150627616|150627850 hsa-miR-4517 0 1 0
chr7:150627616|150627850 hsa-miR-4533 0 1 0
chr7:150627616|150627850 hsa-miR-378i 0 1 0
chr7:150627616|150627850 hsa-miR-4689 1 1 0
chr7:150627616|150627850 hsa-miR-4734 1 0 0
chr7:150627616|150627850 hsa-miR-4784 1 0 0
chr7:150627616|150627850 hsa-miR-5194 1 0 0
chr7:150627616|150627850 hsa-miR-6127 1 0 0
chr7:150627616|150627850 hsa-miR-378j 0 1 0
chr7:150627616|150627850 hsa-miR-8089 1 1 0
chr7:150627616|150627850 hsa-miR-12119 0 1 0
chr7:150627616|150627850 hsa-miR-4433b-3p 1 0 0
chr7:150627616|150627850 hsa-miR-6747-3p 1 0 0
chr7:150627616|150627850 hsa-miR-6825-5p 1 0 0
chr7:150627616|150627850 hsa-miR-6894-5p 1 0 0
chr7:150627616|150627850 hsa-miR-1972 1 0 0
chr7:150627616|150627850 hsa-miR-6720-5p 1 1 0
chr7:150627616|150627850 hsa-miR-125a-3p 1 0 0
chr7:150627616|150627850 hsa-miR-3692-5p 0 1 0
chr7:150627616|150627850 hsa-miR-4722-5p 1 0 0
chr7:150627616|150627850 hsa-miR-6873-3p 1 0 0
chr7:150627616|150627850 hsa-miR-6849-3p 1 0 0
chr7:150627616|150627850 hsa-miR-6514-5p 0 1 0
chr7:150627616|150627850 hsa-miR-6821-5p 1 0 0
chr7:150627616|150627850 hsa-miR-7855-5p 1 1 0
chr7:150627616|150627850 hsa-miR-5006-5p 1 0 0
chr7:150627616|150627850 hsa-miR-6786-5p 1 0 0
chr7:150627616|150627850 hsa-miR-1226-5p 1 0 0
chr7:150627616|150627850 hsa-miR-6784-5p 1 0 0
chr7:150627616|150627850 hsa-miR-4640-5p 1 0 0
chr7:150627616|150627850 hsa-miR-7113-3p 1 0 0
chr7:150627616|150627850 hsa-miR-6749-5p 1 0 0
chr7:150627616|150627850 hsa-miR-6809-3p 1 1 0
chr7:150627616|150627850 hsa-miR-6780a-3p 1 1 0
chr7:150627616|150627850 hsa-miR-146b-3p 0 1 0
chr7:150627616|150627850 hsa-miR-4640-3p 1 1 0
chr7:150627616|150627850 hsa-miR-6895-5p 0 1 0
chr7:150627616|150627850 hsa-miR-3191-3p 1 0 0
chr7:150627616|150627850 hsa-miR-1225-5p 1 0 0
chr7:150627616|150627850 hsa-miR-1237-3p 1 0 0
chr7:150627616|150627850 hsa-miR-6811-3p 1 1 0
chr7:150627616|150627850 hsa-miR-7106-3p 1 0 0
chr7:150627616|150627850 hsa-miR-4687-5p 1 0 0
chr7:150627616|150627850 hsa-miR-1910-5p 1 0 0
chr7:150627616|150627850 hsa-miR-2276-5p 0 1 0
chr7:150627616|150627850 hsa-miR-6782-3p 1 0 0
chr7:150627616|150627850 hsa-miR-6856-3p 1 0 0
chr7:150627616|150627850 hsa-miR-1914-5p 1 0 0
chr7:150627616|150627850 hsa-miR-3200-5p 0 1 0
chr7:150627616|150627850 hsa-miR-6880-3p 1 0 0
chr7:150627616|150627850 hsa-miR-204-5p 1 0 0
chr7:150627616|150627850 hsa-miR-6779-3p 1 0 0
chr7:150627616|150627850 hsa-miR-6729-3p 1 0 0
chr7:150627616|150627850 hsa-miR-6756-5p 1 0 0
chr7:150627616|150627850 hsa-miR-6763-5p 1 1 0
chr7:150627616|150627850 hsa-miR-6852-3p 1 1 0
chr7:150627616|150627850 hsa-miR-3620-5p 1 0 0
chr7:150627616|150627850 hsa-miR-6780b-5p 0 1 0
chr7:150627616|150627850 hsa-miR-1909-3p 1 0 0
chr7:150627616|150627850 hsa-miR-4685-5p 1 0 0
chr7:150627616|150627850 hsa-miR-4725-3p 0 1 0
chr7:150627616|150627850 hsa-miR-4726-5p 1 0 0
chr7:150627616|150627850 hsa-miR-6729-5p 1 0 0
chr7:150627616|150627850 hsa-miR-6777-5p 1 0 0
chr7:150627616|150627850 hsa-miR-6858-5p 1 1 0
chr7:150627616|150627850 hsa-miR-6889-5p 1 0 0
chr7:150627616|150627850 hsa-miR-10394-3p 1 0 0
chr7:150627616|150627850 hsa-miR-1914-3p 1 0 0
chr7:150627616|150627850 hsa-miR-3679-5p 1 0 0
chr7:150627616|150627850 hsa-miR-4747-5p 0 1 0
chr7:150627616|150627850 hsa-miR-378a-3p 0 1 0
chr7:150627616|150627850 hsa-miR-302c-3p 0 1 0
chr7:150627616|150627850 hsa-miR-550a-3-5p 0 1 0
chr7:150627616|150627850 hsa-miR-550a-5p 0 1 0
chr7:150627616|150627850 hsa-miR-6837-5p 0 1 0
chr7:150627616|150627850 hsa-miR-6775-3p 1 0 0
chr7:150627616|150627850 hsa-miR-6512-3p 1 1 0
chr7:150627616|150627850 hsa-miR-4768-5p 1 1 0
chr7:150627616|150627850 hsa-miR-6876-3p 1 0 0
chr7:150627616|150627850 hsa-miR-6806-3p 0 1 0
chr7:150627616|150627850 hsa-miR-378d 0 1 0
chr7:150627616|150627850 hsa-miR-7157-3p 0 1 0
chr7:150627616|150627850 hsa-miR-4782-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:150627616|150627850
ORF Type ORF1
Protein Length 78
Nucleotide Length 234
Protein Sequence LETGKHSMGWKEKQRAGHRGVQRLMVSLAQVQHRLKGQPSPAGICGLPQIPSGSGTVLPAKTPHQARPQSLGPGLLAF
Nucleotide Sequence CTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAACAGAGGGCTGGACACAGGGGGGTGCAAAGGCTGATGGTGTCCTTGGCTCAAGTCCAGCACAGGCTCAAAGGTCAGCCTTCCCCAGCAGGCATCTGTGGGCTTCCTCAGATTCCTTCTGGATCTGGGACAGTCCTTCCAGCCAAGACTCCTCACCAGGCACGTCCTCAGAGCCTTGGCCCTGGCTTACTTGCCTTT
CircID chr7:150627616|150627850
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MDLGQSFQPRLLTRHVLRALALAYLPF
Nucleotide Sequence CTGGATCTGGGACAGTCCTTCCAGCCAAGACTCCTCACCAGGCACGTCCTCAGAGCCTTGGCCCTGGCTTACTTGCCTTTC
CircID chr7:150627616|150627850
ORF Type ORF3
Protein Length 69
Nucleotide Length 207
Protein Sequence MERETEGWTQGGAKADGVLGSSPAQAQRSAFPSRHLWASSDSFWIWDSPSSQDSSPGTSSEPWPWLTCL
Nucleotide Sequence ATGGAAAGAGAAACAGAGGGCTGGACACAGGGGGGTGCAAAGGCTGATGGTGTCCTTGGCTCAAGTCCAGCACAGGCTCAAAGGTCAGCCTTCCCCAGCAGGCATCTGTGGGCTTCCTCAGATTCCTTCTGGATCTGGGACAGTCCTTCCAGCCAAGACTCCTCACCAGGCACGTCCTCAGAGCCTTGGCCCTGGCTTACTTGCCTT
CircID chr7:150627616|150627850
ORF Type ORF4
Protein Length 69
Nucleotide Length 207
Protein Sequence MRTCLVRSLGWKDCPRSRRNLRKPTDACWGRLTFEPVLDLSQGHHQPLHPPVSSPLFLFPSHGVLPSLQ
Nucleotide Sequence CTGAGGACGTGCCTGGTGAGGAGTCTTGGCTGGAAGGACTGTCCCAGATCCAGAAGGAATCTGAGGAAGCCCACAGATGCCTGCTGGGGAAGGCTGACCTTTGAGCCTGTGCTGGACTTGAGCCAAGGACACCATCAGCCTTTGCACCCCCCTGTGTCCAGCCCTCTGTTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab