CircRNA Information

General Information
circRNA Basic Information
CircID chr7:151014140|151014332
Strand -
CircType exon
Host Gene ENSG00000164867.9;
Algorism CIRI2;
Sequence CCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTGAGGTGGTGCCTTCTCACATCTGTCCAGAGGCTGCAAGGATTCAGCATTATTCCTCCAGGAAGGAGCAAAACGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:151014140|151014332 hsa-miR-155-5p 0 0 1
chr7:151014140|151014332 hsa-miR-155-3p 0 0 1
chr7:151014140|151014332 hsa-miR-335-5p 0 0 1
chr7:151014140|151014332 hsa-miR-335-3p 0 0 1
chr7:151014140|151014332 hsa-miR-422a 0 0 1
chr7:151014140|151014332 hsa-miR-492 0 0 1
chr7:151014140|151014332 hsa-miR-506-5p 0 0 1
chr7:151014140|151014332 hsa-miR-506-3p 0 0 1
chr7:151014140|151014332 hsa-miR-1301-5p 0 0 1
chr7:151014140|151014332 hsa-miR-1301-3p 0 0 1
chr7:151014140|151014332 hsa-miR-765 0 0 1
chr7:151014140|151014332 hsa-miR-744-5p 0 0 1
chr7:151014140|151014332 hsa-miR-744-3p 0 0 1
chr7:151014140|151014332 hsa-miR-1253 0 0 1
chr7:151014140|151014332 hsa-miR-1266-5p 0 0 1
chr7:151014140|151014332 hsa-miR-1266-3p 0 0 1
chr7:151014140|151014332 hsa-miR-502-5p 0 0 1
chr7:151014140|151014332 hsa-miR-576-3p 0 0 1
chr7:151014140|151014332 hsa-miR-362-5p 1 0 1
chr7:151014140|151014332 hsa-miR-220b 0 0 1
chr7:151014140|151014332 hsa-miR-378 0 0 1
chr7:151014140|151014332 hsa-miR-124 0 0 1
chr7:151014140|151014332 hsa-miR-500 0 0 1
chr7:151014140|151014332 hsa-miR-1300 0 0 1
chr7:151014140|151014332 hsa-miR-637 1 0 0
chr7:151014140|151014332 hsa-miR-663a 1 0 0
chr7:151014140|151014332 hsa-miR-762 1 0 0
chr7:151014140|151014332 hsa-miR-3137 1 0 0
chr7:151014140|151014332 hsa-miR-4298 1 0 0
chr7:151014140|151014332 hsa-miR-3916 1 0 0
chr7:151014140|151014332 hsa-miR-3937 1 0 0
chr7:151014140|151014332 hsa-miR-4656 1 0 0
chr7:151014140|151014332 hsa-miR-4706 1 0 0
chr7:151014140|151014332 hsa-miR-4739 1 0 0
chr7:151014140|151014332 hsa-miR-4741 1 0 0
chr7:151014140|151014332 hsa-miR-5090 1 0 0
chr7:151014140|151014332 hsa-miR-6085 1 0 0
chr7:151014140|151014332 hsa-miR-4433b-3p 1 0 0
chr7:151014140|151014332 hsa-miR-128-1-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6734-5p 1 0 0
chr7:151014140|151014332 hsa-miR-4433a-3p 1 0 0
chr7:151014140|151014332 hsa-miR-671-5p 1 0 0
chr7:151014140|151014332 hsa-miR-7106-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6825-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6894-5p 1 0 0
chr7:151014140|151014332 hsa-miR-4687-3p 1 0 0
chr7:151014140|151014332 hsa-miR-6799-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6728-5p 1 0 0
chr7:151014140|151014332 hsa-miR-766-5p 1 0 0
chr7:151014140|151014332 hsa-miR-3928-3p 1 0 0
chr7:151014140|151014332 hsa-miR-6742-5p 1 0 0
chr7:151014140|151014332 hsa-miR-3180-3p 1 0 0
chr7:151014140|151014332 hsa-miR-6798-5p 1 0 0
chr7:151014140|151014332 hsa-miR-1343-3p 1 0 0
chr7:151014140|151014332 hsa-miR-1226-5p 1 0 0
chr7:151014140|151014332 hsa-miR-3944-3p 1 0 0
chr7:151014140|151014332 hsa-miR-6516-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6749-5p 1 0 0
chr7:151014140|151014332 hsa-miR-4787-5p 1 0 0
chr7:151014140|151014332 hsa-miR-149-3p 1 0 0
chr7:151014140|151014332 hsa-miR-6789-5p 1 0 0
chr7:151014140|151014332 hsa-miR-4740-5p 1 0 0
chr7:151014140|151014332 hsa-miR-500a-5p 1 0 0
chr7:151014140|151014332 hsa-miR-4746-3p 1 0 0
chr7:151014140|151014332 hsa-miR-4680-5p 1 0 0
chr7:151014140|151014332 hsa-miR-10400-5p 1 0 0
chr7:151014140|151014332 hsa-miR-1207-5p 1 0 0
chr7:151014140|151014332 hsa-miR-1233-5p 1 0 0
chr7:151014140|151014332 hsa-miR-4763-3p 1 0 0
chr7:151014140|151014332 hsa-miR-6816-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6870-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6775-5p 1 0 0
chr7:151014140|151014332 hsa-miR-1343-5p 1 0 0
chr7:151014140|151014332 hsa-miR-5001-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6743-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6752-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6756-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6803-5p 1 0 0
chr7:151014140|151014332 hsa-miR-1249-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6779-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6780a-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6797-5p 1 0 0
chr7:151014140|151014332 hsa-miR-4728-5p 1 0 0
chr7:151014140|151014332 hsa-miR-10396a-5p 1 0 0
chr7:151014140|151014332 hsa-miR-10396b-5p 1 0 0
chr7:151014140|151014332 hsa-miR-1909-3p 1 0 0
chr7:151014140|151014332 hsa-miR-328-5p 1 0 0
chr7:151014140|151014332 hsa-miR-4745-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6846-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6848-5p 1 0 0
chr7:151014140|151014332 hsa-miR-3187-5p 1 0 0
chr7:151014140|151014332 hsa-miR-939-5p 1 0 0
chr7:151014140|151014332 hsa-miR-4758-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6750-5p 1 0 0
chr7:151014140|151014332 hsa-miR-6791-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:151014140|151014332
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MRWCLLTSVQRLQGFSIIPPGRSKT
Nucleotide Sequence TTGAGGTGGTGCCTTCTCACATCTGTCCAGAGGCTGCAAGGATTCAGCATTATTCCTCCAGGAAGGAGCAAAACG
CircID chr7:151014140|151014332
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MAFPSSSGRAAARLRSARPGSAPLLPS
Nucleotide Sequence CTGGCTTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTGA
CircID chr7:151014140|151014332
ORF Type ORF3
Protein Length 55
Nucleotide Length 165
Protein Sequence MRAAWLSLPVPGERLPDSGPPDQDQPRSSPLEVVPSHICPEAARIQHYSSRKEQN
Nucleotide Sequence CTGAGAGCCGCCTGGCTTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTGAGGTGGTGCCTTCTCACATCTGTCCAGAGGCTGCAAGGATTCAGCATTATTCCTCCAGGAAGGAGCAAAAC
CircID chr7:151014140|151014332
ORF Type ORF4
Protein Length 48
Nucleotide Length 147
Protein Sequence MQPLDRCEKAPPQEGRSGADPGRADLSRAAALPELEGKARRLSGAVGV
Nucleotide Sequence TTGCAGCCTCTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGA
CircID chr7:151014140|151014332
ORF Type ORF5
Protein Length 36
Nucleotide Length 111
Protein Sequence MLLPGGIMLNPCSLWTDVRRHHLKRGGAGLILVGRT
Nucleotide Sequence TTGCTCCTTCCTGGAGGAATAATGCTGAATCCTTGCAGCCTCTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab