CircRNA Information

General Information
circRNA Basic Information
CircID chr7:151377511|151377685
Strand +
CircType exon
Host Gene ENSG00000013374.14;
Algorism CIRI2;
Sequence CCATGTGGCACCCTGGCAGAGATGGCAGCGTGGGAAGCAGGAAGGTCAGGGCAGTGGGTGCAGGAGGCAGGCAAGCTGGGCAGATGGAGCCACAGCTGGAGAGGAAGCGGTCGGGACACCCTTCCCAGGACCCTGCCCTGGACACCTTCCCCAGGACCCCTGTTCTACAGGACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:151377511|151377685 hsa-miR-198 0 0 1
chr7:151377511|151377685 hsa-miR-370-5p 0 0 1
chr7:151377511|151377685 hsa-miR-370-3p 0 0 1
chr7:151377511|151377685 hsa-miR-662 0 0 1
chr7:151377511|151377685 hsa-miR-766-5p 0 0 1
chr7:151377511|151377685 hsa-miR-766-3p 0 0 1
chr7:151377511|151377685 hsa-miR-874-5p 0 0 1
chr7:151377511|151377685 hsa-miR-874-3p 0 0 1
chr7:151377511|151377685 hsa-miR-1227-5p 0 0 1
chr7:151377511|151377685 hsa-miR-1227-3p 0 0 1
chr7:151377511|151377685 hsa-miR-486-5p 1 1 1
chr7:151377511|151377685 hsa-miR-615-5p 0 0 1
chr7:151377511|151377685 hsa-miR-146b-3p 0 0 1
chr7:151377511|151377685 hsa-miR-188-3p 0 0 1
chr7:151377511|151377685 hsa-miR-1207-5p 1 1 1
chr7:151377511|151377685 hsa-miR-324-3p 1 1 1
chr7:151377511|151377685 hsa-miR-516a-3p 0 1 1
chr7:151377511|151377685 hsa-miR-1260 0 0 1
chr7:151377511|151377685 hsa-miR-346 1 1 0
chr7:151377511|151377685 hsa-miR-612 1 0 0
chr7:151377511|151377685 hsa-miR-632 1 1 0
chr7:151377511|151377685 hsa-miR-1182 1 1 0
chr7:151377511|151377685 hsa-miR-1913 1 0 0
chr7:151377511|151377685 hsa-miR-1976 1 1 0
chr7:151377511|151377685 hsa-miR-7703 1 0 0
chr7:151377511|151377685 hsa-miR-7976 0 1 0
chr7:151377511|151377685 hsa-miR-8089 1 1 0
chr7:151377511|151377685 hsa-miR-214-5p 1 0 0
chr7:151377511|151377685 hsa-miR-18a-3p 1 1 0
chr7:151377511|151377685 hsa-miR-6747-3p 0 1 0
chr7:151377511|151377685 hsa-miR-6836-3p 0 1 0
chr7:151377511|151377685 hsa-miR-6822-3p 1 0 0
chr7:151377511|151377685 hsa-miR-6799-5p 1 1 0
chr7:151377511|151377685 hsa-miR-7114-5p 1 1 0
chr7:151377511|151377685 hsa-miR-6875-3p 1 0 0
chr7:151377511|151377685 hsa-miR-6721-5p 0 1 0
chr7:151377511|151377685 hsa-miR-1915-5p 1 0 0
chr7:151377511|151377685 hsa-miR-1292-5p 1 0 0
chr7:151377511|151377685 hsa-miR-23a-5p 1 0 0
chr7:151377511|151377685 hsa-miR-6782-5p 1 0 0
chr7:151377511|151377685 hsa-miR-5006-5p 0 1 0
chr7:151377511|151377685 hsa-miR-6882-3p 1 0 0
chr7:151377511|151377685 hsa-miR-1343-3p 0 1 0
chr7:151377511|151377685 hsa-miR-939-3p 1 0 0
chr7:151377511|151377685 hsa-miR-4763-5p 1 1 0
chr7:151377511|151377685 hsa-miR-204-3p 0 1 0
chr7:151377511|151377685 hsa-miR-1229-5p 1 0 0
chr7:151377511|151377685 hsa-miR-6894-3p 0 1 0
chr7:151377511|151377685 hsa-miR-7113-3p 1 0 0
chr7:151377511|151377685 hsa-miR-3667-3p 0 1 0
chr7:151377511|151377685 hsa-miR-4732-5p 1 0 0
chr7:151377511|151377685 hsa-miR-103b 1 0 0
chr7:151377511|151377685 hsa-miR-593-3p 0 1 0
chr7:151377511|151377685 hsa-miR-660-3p 0 1 0
chr7:151377511|151377685 hsa-miR-1180-3p 1 0 0
chr7:151377511|151377685 hsa-miR-4732-3p 1 1 0
chr7:151377511|151377685 hsa-miR-6782-3p 1 0 0
chr7:151377511|151377685 hsa-miR-3074-5p 1 0 0
chr7:151377511|151377685 hsa-miR-6777-3p 1 0 0
chr7:151377511|151377685 hsa-miR-502-5p 1 0 0
chr7:151377511|151377685 hsa-miR-6760-3p 1 0 0
chr7:151377511|151377685 hsa-miR-4727-5p 0 1 0
chr7:151377511|151377685 hsa-miR-6761-3p 0 1 0
chr7:151377511|151377685 hsa-miR-6890-3p 1 0 0
chr7:151377511|151377685 hsa-miR-1233-5p 1 0 0
chr7:151377511|151377685 hsa-miR-4763-3p 1 1 0
chr7:151377511|151377685 hsa-miR-6775-5p 1 0 0
chr7:151377511|151377685 hsa-miR-6743-5p 1 0 0
chr7:151377511|151377685 hsa-miR-6722-3p 1 0 0
chr7:151377511|151377685 hsa-miR-6879-5p 0 1 0
chr7:151377511|151377685 hsa-miR-6754-3p 1 0 0
chr7:151377511|151377685 hsa-miR-5196-5p 1 1 0
chr7:151377511|151377685 hsa-miR-6780b-5p 1 1 0
chr7:151377511|151377685 hsa-miR-1909-3p 1 0 0
chr7:151377511|151377685 hsa-miR-4632-5p 0 1 0
chr7:151377511|151377685 hsa-miR-4685-5p 0 1 0
chr7:151377511|151377685 hsa-miR-4725-3p 1 1 0
chr7:151377511|151377685 hsa-miR-6735-5p 0 1 0
chr7:151377511|151377685 hsa-miR-1914-3p 1 0 0
chr7:151377511|151377685 hsa-miR-6791-3p 0 1 0
chr7:151377511|151377685 hsa-miR-4700-5p 0 1 0
chr7:151377511|151377685 hsa-miR-4646-5p 0 1 0
chr7:151377511|151377685 hsa-miR-4747-5p 0 1 0
chr7:151377511|151377685 hsa-miR-6791-5p 1 0 0
chr7:151377511|151377685 hsa-miR-4722-3p 1 0 0
chr7:151377511|151377685 hsa-miR-6893-3p 1 0 0
chr7:151377511|151377685 hsa-miR-11181-5p 1 0 0
chr7:151377511|151377685 hsa-miR-4690-3p 1 0 0
chr7:151377511|151377685 hsa-miR-4769-3p 0 1 0
chr7:151377511|151377685 hsa-miR-4676-3p 1 0 0
chr7:151377511|151377685 hsa-miR-7162-5p 0 1 0
chr7:151377511|151377685 hsa-miR-516b-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:151377511|151377685
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MAEMAAWEAGRSGQWVQEAGKLGRWSHSWRGSGRDTLPRTLPWTPSPGPLFYRT
Nucleotide Sequence CTGGCAGAGATGGCAGCGTGGGAAGCAGGAAGGTCAGGGCAGTGGGTGCAGGAGGCAGGCAAGCTGGGCAGATGGAGCCACAGCTGGAGAGGAAGCGGTCGGGACACCCTTCCCAGGACCCTGCCCTGGACACCTTCCCCAGGACCCCTGTTCTACAGGACC
CircID chr7:151377511|151377685
ORF Type ORF2
Protein Length 57
Nucleotide Length 171
Protein Sequence MWHPGRDGSVGSRKVRAVGAGGRQAGQMEPQLERKRSGHPSQDPALDTFPRTPVLQD
Nucleotide Sequence ATGTGGCACCCTGGCAGAGATGGCAGCGTGGGAAGCAGGAAGGTCAGGGCAGTGGGTGCAGGAGGCAGGCAAGCTGGGCAGATGGAGCCACAGCTGGAGAGGAAGCGGTCGGGACACCCTTCCCAGGACCCTGCCCTGGACACCTTCCCCAGGACCCCTGTTCTACAGGAC
CircID chr7:151377511|151377685
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MGKVSRAGSWEGCPDRFLSSCGSICPACLPPAPTALTFLLPTLPSLPGCHM
Nucleotide Sequence CTGGGGAAGGTGTCCAGGGCAGGGTCCTGGGAAGGGTGTCCCGACCGCTTCCTCTCCAGCTGTGGCTCCATCTGCCCAGCTTGCCTGCCTCCTGCACCCACTGCCCTGACCTTCCTGCTTCCCACGCTGCCATCTCTGCCAGGGTGCCACATG
CircID chr7:151377511|151377685
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MGRVSRPLPLQLWLHLPSLPASCTHCPDLPASHAAISARVPH
Nucleotide Sequence CTGGGAAGGGTGTCCCGACCGCTTCCTCTCCAGCTGTGGCTCCATCTGCCCAGCTTGCCTGCCTCCTGCACCCACTGCCCTGACCTTCCTGCTTCCCACGCTGCCATCTCTGCCAGGGTGCCACAT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab