CircRNA Information

General Information
circRNA Basic Information
CircID chr7:155775512|155775622
Strand +
CircType exon
Host Gene ENSG00000184863.9;
Algorism CIRI2;
Sequence TGGCACCACTCCCAACCACCCCACTCACACCCTGGCTTTCCAGGGTATGCAAAGGTCAATCAACAATCACCCAAATTTTAATCTACATTTTGTACAAGAGCCTTTTGAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:155775512|155775622 hsa-miR-192-5p 0 0 1
chr7:155775512|155775622 hsa-miR-192-3p 0 0 1
chr7:155775512|155775622 hsa-miR-10a-5p 0 0 1
chr7:155775512|155775622 hsa-miR-10a-3p 0 0 1
chr7:155775512|155775622 hsa-miR-10b-5p 0 0 1
chr7:155775512|155775622 hsa-miR-10b-3p 0 0 1
chr7:155775512|155775622 hsa-miR-215-5p 0 0 1
chr7:155775512|155775622 hsa-miR-215-3p 0 0 1
chr7:155775512|155775622 hsa-miR-448 0 0 1
chr7:155775512|155775622 hsa-miR-608 1 1 1
chr7:155775512|155775622 hsa-miR-643 0 0 1
chr7:155775512|155775622 hsa-miR-653-5p 0 0 1
chr7:155775512|155775622 hsa-miR-653-3p 0 0 1
chr7:155775512|155775622 hsa-miR-1293 0 1 1
chr7:155775512|155775622 hsa-miR-1262 0 0 1
chr7:155775512|155775622 hsa-miR-876-3p 0 0 1
chr7:155775512|155775622 hsa-miR-875-3p 0 0 1
chr7:155775512|155775622 hsa-miR-342-5p 0 0 1
chr7:155775512|155775622 hsa-miR-508-3p 0 0 1
chr7:155775512|155775622 hsa-miR-153 0 0 1
chr7:155775512|155775622 hsa-miR-219-5p 0 0 1
chr7:155775512|155775622 hsa-miR-4455 0 1 0
chr7:155775512|155775622 hsa-miR-4481 1 1 0
chr7:155775512|155775622 hsa-miR-4483 0 1 0
chr7:155775512|155775622 hsa-miR-4507 1 0 0
chr7:155775512|155775622 hsa-miR-1587 1 0 0
chr7:155775512|155775622 hsa-miR-4651 1 1 0
chr7:155775512|155775622 hsa-miR-4698 0 1 0
chr7:155775512|155775622 hsa-miR-5572 1 0 0
chr7:155775512|155775622 hsa-miR-5787 1 0 0
chr7:155775512|155775622 hsa-miR-92a-1-5p 0 1 0
chr7:155775512|155775622 hsa-miR-6747-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6825-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6728-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6742-5p 1 1 0
chr7:155775512|155775622 hsa-miR-3151-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6748-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6796-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6782-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6786-5p 1 0 0
chr7:155775512|155775622 hsa-miR-1229-5p 1 0 0
chr7:155775512|155775622 hsa-miR-1228-5p 1 0 0
chr7:155775512|155775622 hsa-miR-3162-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6802-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6782-3p 0 1 0
chr7:155775512|155775622 hsa-miR-6759-3p 0 1 0
chr7:155775512|155775622 hsa-miR-3680-3p 0 1 0
chr7:155775512|155775622 hsa-miR-6769b-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6812-5p 1 1 0
chr7:155775512|155775622 hsa-miR-6737-5p 1 1 0
chr7:155775512|155775622 hsa-miR-6756-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6803-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6819-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6842-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6779-5p 1 0 0
chr7:155775512|155775622 hsa-miR-3620-5p 1 0 0
chr7:155775512|155775622 hsa-miR-4685-5p 1 0 0
chr7:155775512|155775622 hsa-miR-4701-3p 0 1 0
chr7:155775512|155775622 hsa-miR-4745-5p 1 1 0
chr7:155775512|155775622 hsa-miR-1238-5p 1 0 0
chr7:155775512|155775622 hsa-miR-4758-5p 1 1 0
chr7:155775512|155775622 hsa-miR-6736-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6855-5p 1 0 0
chr7:155775512|155775622 hsa-miR-6790-5p 1 0 0
chr7:155775512|155775622 hsa-miR-3121-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:155775512|155775622
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MAFQGMQRSINNHPNFNLHFVQEPFE
Nucleotide Sequence CTGGCTTTCCAGGGTATGCAAAGGTCAATCAACAATCACCCAAATTTTAATCTACATTTTGTACAAGAGCCTTTTGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab