CircRNA Information

General Information
circRNA Basic Information
CircID chr7:156675663|156675867
Strand +
CircType exon
Host Gene ENSG00000105982.15;
Algorism CIRI2;
Sequence CTACCTGCACTTGGATTTTCTCCCATTCCTCTTCTGTGATCTCATGGCCACATTTTTCTTCCAACTGCTGAAGAACACTTCGATTTATGGCCAAGCACTGATCGATTTCTGCAAAGAGCTCTTCAATGTTGGTGTTGTATGAGCACAGGATGCGGTGGCTGATTTCTGTGAACTGAGGAGGAGGCGGGGGCGGGTAAGCTCACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:156675663|156675867 hsa-miR-27a-5p 0 0 1
chr7:156675663|156675867 hsa-miR-27a-3p 0 0 1
chr7:156675663|156675867 hsa-miR-148a-5p 0 0 1
chr7:156675663|156675867 hsa-miR-148a-3p 0 0 1
chr7:156675663|156675867 hsa-miR-214-5p 0 0 1
chr7:156675663|156675867 hsa-miR-214-3p 0 0 1
chr7:156675663|156675867 hsa-miR-27b-5p 0 0 1
chr7:156675663|156675867 hsa-miR-27b-3p 0 0 1
chr7:156675663|156675867 hsa-miR-152-5p 0 0 1
chr7:156675663|156675867 hsa-miR-152-3p 0 0 1
chr7:156675663|156675867 hsa-miR-148b-5p 0 0 1
chr7:156675663|156675867 hsa-miR-148b-3p 0 0 1
chr7:156675663|156675867 hsa-miR-520f-5p 0 0 1
chr7:156675663|156675867 hsa-miR-520f-3p 0 0 1
chr7:156675663|156675867 hsa-miR-588 0 0 1
chr7:156675663|156675867 hsa-miR-636 1 0 1
chr7:156675663|156675867 hsa-miR-657 0 0 1
chr7:156675663|156675867 hsa-miR-298 0 0 1
chr7:156675663|156675867 hsa-miR-922 0 0 1
chr7:156675663|156675867 hsa-miR-663b 0 0 1
chr7:156675663|156675867 hsa-miR-1281 1 1 1
chr7:156675663|156675867 hsa-miR-513a-5p 0 0 1
chr7:156675663|156675867 hsa-miR-485-3p 0 0 1
chr7:156675663|156675867 hsa-miR-519b-3p 0 0 1
chr7:156675663|156675867 hsa-miR-519c-3p 0 0 1
chr7:156675663|156675867 hsa-miR-7 0 0 1
chr7:156675663|156675867 hsa-miR-519a 0 0 1
chr7:156675663|156675867 hsa-miR-1913 1 0 0
chr7:156675663|156675867 hsa-miR-718 1 0 0
chr7:156675663|156675867 hsa-miR-3125 1 1 0
chr7:156675663|156675867 hsa-miR-3154 1 1 0
chr7:156675663|156675867 hsa-miR-4258 1 0 0
chr7:156675663|156675867 hsa-miR-4739 1 0 0
chr7:156675663|156675867 hsa-miR-5193 1 0 0
chr7:156675663|156675867 hsa-miR-6124 1 0 0
chr7:156675663|156675867 hsa-miR-8085 1 0 0
chr7:156675663|156675867 hsa-miR-22-5p 0 1 0
chr7:156675663|156675867 hsa-miR-4435 1 0 0
chr7:156675663|156675867 hsa-miR-4433b-3p 1 0 0
chr7:156675663|156675867 hsa-miR-6749-3p 1 0 0
chr7:156675663|156675867 hsa-miR-4433a-3p 1 0 0
chr7:156675663|156675867 hsa-miR-6836-3p 1 0 0
chr7:156675663|156675867 hsa-miR-6892-3p 1 0 0
chr7:156675663|156675867 hsa-miR-210-5p 1 0 0
chr7:156675663|156675867 hsa-miR-125a-3p 1 0 0
chr7:156675663|156675867 hsa-miR-6728-5p 1 0 0
chr7:156675663|156675867 hsa-miR-766-5p 1 0 0
chr7:156675663|156675867 hsa-miR-6757-5p 1 0 0
chr7:156675663|156675867 hsa-miR-4695-5p 1 0 0
chr7:156675663|156675867 hsa-miR-6746-5p 1 0 0
chr7:156675663|156675867 hsa-miR-4709-3p 1 0 0
chr7:156675663|156675867 hsa-miR-3677-5p 1 0 0
chr7:156675663|156675867 hsa-miR-3622b-5p 1 0 0
chr7:156675663|156675867 hsa-miR-3187-3p 1 1 0
chr7:156675663|156675867 hsa-miR-7108-5p 1 0 0
chr7:156675663|156675867 hsa-miR-6716-5p 1 0 0
chr7:156675663|156675867 hsa-miR-6760-5p 1 1 0
chr7:156675663|156675867 hsa-miR-6882-3p 1 0 0
chr7:156675663|156675867 hsa-miR-4793-5p 0 1 0
chr7:156675663|156675867 hsa-miR-7108-3p 1 1 0
chr7:156675663|156675867 hsa-miR-1247-5p 1 0 0
chr7:156675663|156675867 hsa-miR-4707-3p 1 0 0
chr7:156675663|156675867 hsa-miR-6803-3p 1 1 0
chr7:156675663|156675867 hsa-miR-6878-5p 0 1 0
chr7:156675663|156675867 hsa-miR-1224-3p 1 0 0
chr7:156675663|156675867 hsa-miR-6752-3p 1 0 0
chr7:156675663|156675867 hsa-miR-625-5p 1 0 0
chr7:156675663|156675867 hsa-miR-6746-3p 1 0 0
chr7:156675663|156675867 hsa-miR-1914-5p 0 1 0
chr7:156675663|156675867 hsa-miR-1233-5p 1 0 0
chr7:156675663|156675867 hsa-miR-1273h-5p 1 0 0
chr7:156675663|156675867 hsa-miR-6778-5p 1 0 0
chr7:156675663|156675867 hsa-miR-6779-5p 1 0 0
chr7:156675663|156675867 hsa-miR-6780a-5p 1 0 0
chr7:156675663|156675867 hsa-miR-6788-5p 1 1 0
chr7:156675663|156675867 hsa-miR-4728-5p 1 0 0
chr7:156675663|156675867 hsa-miR-6858-5p 1 0 0
chr7:156675663|156675867 hsa-miR-1238-5p 1 0 0
chr7:156675663|156675867 hsa-miR-4758-5p 1 0 0
chr7:156675663|156675867 hsa-miR-4769-5p 1 0 0
chr7:156675663|156675867 hsa-miR-6731-5p 1 0 0
chr7:156675663|156675867 hsa-miR-5008-3p 0 1 0
chr7:156675663|156675867 hsa-miR-6791-3p 1 0 0
chr7:156675663|156675867 hsa-miR-2682-3p 1 0 0
chr7:156675663|156675867 hsa-miR-6727-3p 1 0 0
chr7:156675663|156675867 hsa-miR-6529-5p 0 1 0
chr7:156675663|156675867 hsa-miR-6829-3p 1 1 0
chr7:156675663|156675867 hsa-miR-10392-3p 1 0 0
chr7:156675663|156675867 hsa-miR-6781-3p 1 0 0
chr7:156675663|156675867 hsa-miR-21-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:156675663|156675867
ORF Type ORF1
Protein Length 45
Nucleotide Length 138
Protein Sequence MHLDFLPFLFCDLMATFFFQLLKNTSIYGQALIDFCKELFNVGVV
Nucleotide Sequence CTGCACTTGGATTTTCTCCCATTCCTCTTCTGTGATCTCATGGCCACATTTTTCTTCCAACTGCTGAAGAACACTTCGATTTATGGCCAAGCACTGATCGATTTCTGCAAAGAGCTCTTCAATGTTGGTGTTGTATGA
CircID chr7:156675663|156675867
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence MCSYNTNIEELFAEIDQCLAINRSVLQQLEEKCGHEITEEEWEKIQVQV
Nucleotide Sequence CTGTGCTCATACAACACCAACATTGAAGAGCTCTTTGCAGAAATCGATCAGTGCTTGGCCATAAATCGAAGTGTTCTTCAGCAGTTGGAAGAAAAATGTGGCCATGAGATCACAGAAGAGGAATGGGAGAAAATCCAAGTGCAGGTA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab