CircRNA Information

General Information
circRNA Basic Information
CircID chr7:1575931|1576123
Strand +
CircType exon
Host Gene ENSG00000230487.6;
Algorism CIRI2;
Sequence CCCAGTTCGAGAGTCTTGAGAGTAGATAGGAACCCCCCAGGAAACACAGCAATCACAGAAGTACAGACCTGGAGGCCACATTGCCAATCTGCCCATTTTACAGATGAGAAAACAGAGGCCCAGGATGGGAAGGGAATCATCCAAGGTCATCAGCAAGTTAGAGGTGAGGCCAAGGCAGGGCTTGGGCTGTGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:1575931|1576123 hsa-miR-182-5p 0 0 1
chr7:1575931|1576123 hsa-miR-182-3p 0 0 1
chr7:1575931|1576123 hsa-miR-204-5p 0 0 1
chr7:1575931|1576123 hsa-miR-204-3p 0 0 1
chr7:1575931|1576123 hsa-miR-211-5p 0 0 1
chr7:1575931|1576123 hsa-miR-211-3p 0 0 1
chr7:1575931|1576123 hsa-miR-623 0 0 1
chr7:1575931|1576123 hsa-miR-637 1 1 1
chr7:1575931|1576123 hsa-miR-663b 0 0 1
chr7:1575931|1576123 hsa-miR-1255a 0 0 1
chr7:1575931|1576123 hsa-miR-513c-5p 0 0 1
chr7:1575931|1576123 hsa-miR-513c-3p 0 0 1
chr7:1575931|1576123 hsa-miR-628-5p 0 0 1
chr7:1575931|1576123 hsa-miR-337-3p 0 0 1
chr7:1575931|1576123 hsa-miR-1255b 0 0 1
chr7:1575931|1576123 hsa-miR-934 0 1 0
chr7:1575931|1576123 hsa-miR-2861 1 0 0
chr7:1575931|1576123 hsa-miR-4502 0 1 0
chr7:1575931|1576123 hsa-miR-4641 0 1 0
chr7:1575931|1576123 hsa-miR-6860 1 0 0
chr7:1575931|1576123 hsa-miR-6747-3p 0 1 0
chr7:1575931|1576123 hsa-miR-6861-5p 1 0 0
chr7:1575931|1576123 hsa-miR-23b-5p 0 1 0
chr7:1575931|1576123 hsa-miR-197-5p 1 0 0
chr7:1575931|1576123 hsa-miR-7108-5p 0 1 0
chr7:1575931|1576123 hsa-miR-6793-5p 1 0 0
chr7:1575931|1576123 hsa-miR-6829-5p 1 0 0
chr7:1575931|1576123 hsa-miR-615-3p 1 0 0
chr7:1575931|1576123 hsa-miR-1343-3p 1 1 0
chr7:1575931|1576123 hsa-miR-939-3p 1 1 0
chr7:1575931|1576123 hsa-miR-5004-3p 1 0 0
chr7:1575931|1576123 hsa-miR-3667-3p 1 1 0
chr7:1575931|1576123 hsa-miR-6878-3p 1 1 0
chr7:1575931|1576123 hsa-miR-6780a-3p 1 1 0
chr7:1575931|1576123 hsa-miR-4776-3p 1 1 0
chr7:1575931|1576123 hsa-miR-5088-3p 1 1 0
chr7:1575931|1576123 hsa-miR-20b-3p 1 0 0
chr7:1575931|1576123 hsa-miR-3173-5p 1 1 0
chr7:1575931|1576123 hsa-miR-6779-3p 0 1 0
chr7:1575931|1576123 hsa-miR-6743-5p 1 0 0
chr7:1575931|1576123 hsa-miR-320a-5p 0 1 0
chr7:1575931|1576123 hsa-miR-4685-3p 1 1 0
chr7:1575931|1576123 hsa-miR-4755-5p 1 1 0
chr7:1575931|1576123 hsa-miR-5189-5p 1 0 0
chr7:1575931|1576123 hsa-miR-6735-5p 1 0 0
chr7:1575931|1576123 hsa-miR-3187-5p 1 0 0
chr7:1575931|1576123 hsa-miR-365a-5p 1 0 0
chr7:1575931|1576123 hsa-miR-6799-3p 1 1 0
chr7:1575931|1576123 hsa-miR-6877-3p 1 0 0
chr7:1575931|1576123 hsa-miR-6724-5p 1 0 0
chr7:1575931|1576123 hsa-miR-6753-3p 0 1 0
chr7:1575931|1576123 hsa-miR-4757-5p 1 1 0
chr7:1575931|1576123 hsa-miR-330-5p 1 0 0
chr7:1575931|1576123 hsa-miR-6744-3p 1 1 0
chr7:1575931|1576123 hsa-miR-6783-3p 1 1 0
chr7:1575931|1576123 hsa-miR-5006-3p 1 1 0
chr7:1575931|1576123 hsa-miR-4690-3p 0 1 0
chr7:1575931|1576123 hsa-miR-6843-3p 0 1 0
chr7:1575931|1576123 hsa-miR-4699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:1575931|1576123
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence MRVDRNPPGNTAITEVQTWRPHCQSAHFTDEKTEAQDGKGIIQGHQQVRGEAKAGLGLC
Nucleotide Sequence TTGAGAGTAGATAGGAACCCCCCAGGAAACACAGCAATCACAGAAGTACAGACCTGGAGGCCACATTGCCAATCTGCCCATTTTACAGATGAGAAAACAGAGGCCCAGGATGGGAAGGGAATCATCCAAGGTCATCAGCAAGTTAGAGGTGAGGCCAAGGCAGGGCTTGGGCTGTGT

CircID chr7:1575931|1576123
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MPILQMRKQRPRMGRESSKVISKLEVRPRQGLGCV
Nucleotide Sequence CTGCCCATTTTACAGATGAGAAAACAGAGGCCCAGGATGGGAAGGGAATCATCCAAGGTCATCAGCAAGTTAGAGGTGAGGCCAAGGCAGGGCTTGGGCTGTGTC

CircID chr7:1575931|1576123
ORF Type ORF3
Protein Length 52
Nucleotide Length 156
Protein Sequence MLMTLDDSLPILGLCFLICKMGRLAMWPPGLYFCDCCVSWGVPIYSQDSRTG
Nucleotide Sequence TTGCTGATGACCTTGGATGATTCCCTTCCCATCCTGGGCCTCTGTTTTCTCATCTGTAAAATGGGCAGATTGGCAATGTGGCCTCCAGGTCTGTACTTCTGTGATTGCTGTGTTTCCTGGGGGGTTCCTATCTACTCTCAAGACTCTCGAACTGGG

CircID chr7:1575931|1576123
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MIPFPSWASVFSSVKWADWQCGLQVCTSVIAVFPGGFLSTLKTLEL
Nucleotide Sequence ATGATTCCCTTCCCATCCTGGGCCTCTGTTTTCTCATCTGTAAAATGGGCAGATTGGCAATGTGGCCTCCAGGTCTGTACTTCTGTGATTGCTGTGTTTCCTGGGGGGTTCCTATCTACTCTCAAGACTCTCGAACTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites