CircRNA Information

General Information
circRNA Basic Information
CircID chr7:158741631|158741753
Strand +
CircType exon
Host Gene ENSG00000117868.14;
Algorism CIRI2;
Sequence AGCTCCATCCACACCAGTCATTGGGGGCAGTGATAAGCCTGGTATGGAAGAAAAGGCCCAGCCCCCTGAGGCCGGCCCTCAGGGGCTGCACGACCTGGGCAGAAGCTCCTCCAGCCTCCTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:158741631|158741753 hsa-miR-517-5p 0 0 1
chr7:158741631|158741753 hsa-miR-517a-3p 0 0 1
chr7:158741631|158741753 hsa-miR-517b-3p 0 0 1
chr7:158741631|158741753 hsa-miR-517c-3p 0 0 1
chr7:158741631|158741753 hsa-miR-587 0 0 1
chr7:158741631|158741753 hsa-miR-765 0 0 1
chr7:158741631|158741753 hsa-miR-708-5p 0 0 1
chr7:158741631|158741753 hsa-miR-708-3p 0 0 1
chr7:158741631|158741753 hsa-miR-665 1 1 1
chr7:158741631|158741753 hsa-miR-1266-5p 0 0 1
chr7:158741631|158741753 hsa-miR-1266-3p 0 0 1
chr7:158741631|158741753 hsa-miR-485-5p 0 0 1
chr7:158741631|158741753 hsa-miR-28-5p 0 0 1
chr7:158741631|158741753 hsa-miR-34c-3p 0 0 1
chr7:158741631|158741753 hsa-miR-324-3p 1 1 1
chr7:158741631|158741753 hsa-miR-125a-5p 0 0 1
chr7:158741631|158741753 hsa-miR-125b 0 0 1
chr7:158741631|158741753 hsa-miR-762 1 0 0
chr7:158741631|158741753 hsa-miR-1913 0 1 0
chr7:158741631|158741753 hsa-miR-3652 0 1 0
chr7:158741631|158741753 hsa-miR-3937 1 0 0
chr7:158741631|158741753 hsa-miR-4430 0 1 0
chr7:158741631|158741753 hsa-miR-4492 0 1 0
chr7:158741631|158741753 hsa-miR-5698 1 0 0
chr7:158741631|158741753 hsa-miR-6085 1 0 0
chr7:158741631|158741753 hsa-miR-6894-5p 1 0 0
chr7:158741631|158741753 hsa-miR-6089 1 0 0
chr7:158741631|158741753 hsa-miR-4695-5p 0 1 0
chr7:158741631|158741753 hsa-miR-4722-5p 1 0 0
chr7:158741631|158741753 hsa-miR-6875-3p 1 1 0
chr7:158741631|158741753 hsa-miR-185-3p 0 1 0
chr7:158741631|158741753 hsa-miR-6805-5p 0 1 0
chr7:158741631|158741753 hsa-miR-6798-5p 1 1 0
chr7:158741631|158741753 hsa-miR-3934-3p 0 1 0
chr7:158741631|158741753 hsa-miR-939-3p 1 0 0
chr7:158741631|158741753 hsa-miR-7156-3p 0 1 0
chr7:158741631|158741753 hsa-miR-6781-5p 0 1 0
chr7:158741631|158741753 hsa-miR-208a-5p 0 1 0
chr7:158741631|158741753 hsa-miR-6738-3p 0 1 0
chr7:158741631|158741753 hsa-miR-6870-5p 1 0 0
chr7:158741631|158741753 hsa-miR-1343-5p 1 0 0
chr7:158741631|158741753 hsa-miR-5001-5p 1 1 0
chr7:158741631|158741753 hsa-miR-6726-5p 1 0 0
chr7:158741631|158741753 hsa-miR-6754-5p 1 0 0
chr7:158741631|158741753 hsa-miR-3620-5p 1 0 0
chr7:158741631|158741753 hsa-miR-6846-5p 1 1 0
chr7:158741631|158741753 hsa-miR-6848-5p 1 1 0
chr7:158741631|158741753 hsa-miR-939-5p 1 0 0
chr7:158741631|158741753 hsa-miR-6884-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:158741631|158741753
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MEEKAQPPEAGPQGLHDLGRSSSSLL
Nucleotide Sequence ATGGAAGAAAAGGCCCAGCCCCCTGAGGCCGGCCCTCAGGGGCTGCACGACCTGGGCAGAAGCTCCTCCAGCCTCCTG

CircID chr7:158741631|158741753
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MGAVISLVWKKRPSPLRPALRGCTTWAEAPPASW
Nucleotide Sequence TTGGGGGCAGTGATAAGCCTGGTATGGAAGAAAAGGCCCAGCCCCCTGAGGCCGGCCCTCAGGGGCTGCACGACCTGGGCAGAAGCTCCTCCAGCCTCCTGG

CircID chr7:158741631|158741753
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MRAGLRGLGLFFHTRLITAPNDWCGWS
Nucleotide Sequence CTGAGGGCCGGCCTCAGGGGGCTGGGCCTTTTCTTCCATACCAGGCTTATCACTGCCCCCAATGACTGGTGTGGATGGAGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites