CircRNA Information

General Information
circRNA Basic Information
CircID chr7:21904110|21908507
Strand -
CircType exon
Host Gene ENSG00000164649.19;
Algorism find_circ;CIRI2;DCC;
Sequence GTCGTGGAGTCAGATTTGAGTGATGATGGCAAAGCATCTTTGGTGAGCGAGGAAGAGGAAGATGAAGAAGAAGATAAGGCTACCCCTAGAAGAAGCAGGTCTAGAAGAAGTAGTATTGGTCTTCGAGTAGCCTTTCAGTTCCCCACCAAGAAGCTGGCCAACAAACCAGATAAAAACAGTTCTTCCGAGCAGTTGTTTTCTAGCGCACGCTTACAGAATGAGAAAAAAACAATTCTTGAAAGAAAGAAAGACTGTAGACAGGTGATACAAAGGGAAGATTCTACCTCTGAGTCTGAGGATGACTCTCGGGATGAGAGCCAGGAGAGTTCAGATGCTTTGCTGAAAAGGACCATGAACATCAAGGAGAACAAAGCCATGCTTGCCCAGTTATTGGCGGAATTGAACTCGATGCCAGATTTCTTCCCAGTACGAACCCCAACCTCAGCTTCTAGGAAGAAGACAGTGAGGCGGGCCTTCTCGGAGGGACAGATCACGCGGCGTATGAACCCAACCCGGAGTGCGCGGCCTCCTGAGAAGTTTGCTCTAGAGAACTTCACTGTCTCAGCCGCTAAATTTGCGGAAGAGTTTTACAGCTTCCGAAGAAGGAAGACAATTGGGTTTGAGAGTTTAAAATATTTATAATTTTTTTATAACTGCTCAACACATCTCCATGTTCTGCTTGTGTTCATTGTGCAGGGGAAATGCCGGGAGTACAGACGACGTCACCGTATATCTTCTTTTCGGCCAGTGGAGGATATCACCGAAGAGGACTTAGAAAATGTTGCCATAACTGTTCGAGATAAAATCTATGATAAAGTTCTGGGTAACACGTGCCATCAGTGTCGACAAAAGACCATCGACACCAAGACAGTGTGTCGGAACCAGGGTTGCTGTGGTGTGCGAGGACAGTTCTGTGGACCATGCCTGCGGAACCGCTATGGGGAGGATGTCAGATCGGCATTGCTGGACCCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:21904110|21908507 hsa-miR-765 1 1 1
chr7:21904110|21908507 hsa-miR-1183 1 1 1
chr7:21904110|21908507 hsa-miR-1203 1 1 1
chr7:21904110|21908507 hsa-miR-1272 1 1 1
chr7:21904110|21908507 hsa-miR-3137 1 1 1
chr7:21904110|21908507 hsa-miR-3138 1 1 1
chr7:21904110|21908507 hsa-miR-3154 1 1 1
chr7:21904110|21908507 hsa-miR-4479 1 1 1
chr7:21904110|21908507 hsa-miR-4710 1 1 1
chr7:21904110|21908507 hsa-miR-4734 1 1 1
chr7:21904110|21908507 hsa-miR-4751 1 1 1
chr7:21904110|21908507 hsa-miR-6765-5p 1 1 1
chr7:21904110|21908507 hsa-miR-3150a-3p 1 1 1
chr7:21904110|21908507 hsa-miR-7106-5p 1 1 1
chr7:21904110|21908507 hsa-miR-6825-5p 1 1 1
chr7:21904110|21908507 hsa-miR-6894-5p 1 1 1
chr7:21904110|21908507 hsa-miR-6857-5p 1 1 1
chr7:21904110|21908507 hsa-miR-4792 1 1 1
chr7:21904110|21908507 hsa-miR-181c-3p 1 1 1
chr7:21904110|21908507 hsa-miR-6799-5p 1 1 1
chr7:21904110|21908507 hsa-miR-6510-5p 1 1 1
chr7:21904110|21908507 hsa-miR-766-5p 1 1 1
chr7:21904110|21908507 hsa-miR-6833-5p 1 1 1
chr7:21904110|21908507 hsa-miR-5187-5p 1 1 1
chr7:21904110|21908507 hsa-miR-7114-5p 1 1 1
chr7:21904110|21908507 hsa-miR-7847-3p 1 1 1
chr7:21904110|21908507 hsa-miR-4709-3p 1 1 1
chr7:21904110|21908507 hsa-miR-6890-5p 1 1 1
chr7:21904110|21908507 hsa-miR-148a-5p 1 1 1
chr7:21904110|21908507 hsa-miR-656-5p 1 1 1
chr7:21904110|21908507 hsa-miR-1224-5p 1 1 1
chr7:21904110|21908507 hsa-miR-3126-5p 1 1 1
chr7:21904110|21908507 hsa-miR-6810-5p 1 1 1
chr7:21904110|21908507 hsa-miR-6850-5p 1 1 1
chr7:21904110|21908507 hsa-miR-185-5p 1 1 1
chr7:21904110|21908507 hsa-miR-6771-5p 1 1 1
chr7:21904110|21908507 hsa-miR-6823-5p 1 1 1
chr7:21904110|21908507 hsa-miR-937-5p 1 1 1
chr7:21904110|21908507 hsa-miR-3619-3p 1 1 1
chr7:21904110|21908507 hsa-miR-381-5p 1 1 1
chr7:21904110|21908507 hsa-miR-7113-5p 1 1 1
chr7:21904110|21908507 hsa-miR-524-5p 1 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr7:21904110|21908507 U2AF2 1 3 1
chr7:21904110|21908507 ELAVL1 0 3 7
chr7:21904110|21908507 NUMA1 0 1 0
chr7:21904110|21908507 CELF2 2 0 0
chr7:21904110|21908507 CNBP 0 0 2
chr7:21904110|21908507 UPF1 0 1 0
chr7:21904110|21908507 TAF15 0 1 0
chr7:21904110|21908507 FMR1 0 0 15
chr7:21904110|21908507 CPSF4 0 1 0
chr7:21904110|21908507 FUS 2 1 0
chr7:21904110|21908507 DGCR8 1 0 4
chr7:21904110|21908507 SRSF1 1 1 4
chr7:21904110|21908507 NOP58 0 1 9
chr7:21904110|21908507 NOP56 1 0 0
chr7:21904110|21908507 DDX54 0 0 10
chr7:21904110|21908507 RBM10 0 1 0
chr7:21904110|21908507 FIP1L1 0 1 0
chr7:21904110|21908507 PTBP1 2 0 0
chr7:21904110|21908507 HNRNPC 0 2 0
chr7:21904110|21908507 ZNF184 0 0 3
chr7:21904110|21908507 MSI2 1 0 2
chr7:21904110|21908507 HNRNPA1 0 1 0
chr7:21904110|21908507 RANGAP1 0 0 1
chr7:21904110|21908507 LIN28A 0 0 1
chr7:21904110|21908507 LIN28B 0 0 1
chr7:21904110|21908507 IGF2BP1 0 0 1
chr7:21904110|21908507 IGF2BP2 0 1 14
chr7:21904110|21908507 TARDBP 1 0 1
chr7:21904110|21908507 RBFOX2 2 8 0
chr7:21904110|21908507 RBM47 0 0 1
chr7:21904110|21908507 CSTF2T 0 1 2
chr7:21904110|21908507 FBL 0 1 5
chr7:21904110|21908507 EIF4A3 4 7 12
chr7:21904110|21908507 AGO2 0 0 10
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab