CircRNA Information

General Information
circRNA Basic Information
CircID chr7:22960256|22976305
Strand -
CircType exon
Host Gene ENSG00000122591.11;
Algorism find_circ;CIRI2;DCC;
Sequence GTTTGAAGTGTTGACATTCCTTTTGTTGTGTTACAATGCTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGTTCAAGAATCTGTGTTTGTGGATATCCTCGACAACATGTAAGAAAATATAAAGGTATAAGTAGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAACAGGGATTTATTTTGCCTTTTATAATGGAGAATGGGATCTAGCTCAAAAAGCACTGGATGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATCACACCAACTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr7:22960256|22976305 NOP56 1 1 1
chr7:22960256|22976305 MOV10 2 0 1
chr7:22960256|22976305 ELAVL1 2 9 2
chr7:22960256|22976305 ELAVL3 0 1 0
chr7:22960256|22976305 PRPF8 1 2 0
chr7:22960256|22976305 UPF1 1 0 0
chr7:22960256|22976305 FMR1 3 0 0
chr7:22960256|22976305 TIA1 0 2 0
chr7:22960256|22976305 CNBP 1 0 0
chr7:22960256|22976305 FUS 1 2 0
chr7:22960256|22976305 GNL3 0 0 1
chr7:22960256|22976305 CPSF7 0 2 0
chr7:22960256|22976305 SRSF1 2 0 1
chr7:22960256|22976305 NOP58 1 1 3
chr7:22960256|22976305 U2AF1 5 1 2
chr7:22960256|22976305 U2AF2 25 14 7
chr7:22960256|22976305 LSM11 0 1 0
chr7:22960256|22976305 RBM10 2 0 0
chr7:22960256|22976305 RNF219 0 1 0
chr7:22960256|22976305 PTBP1 3 9 0
chr7:22960256|22976305 HNRNPC 0 5 0
chr7:22960256|22976305 HNRNPA1 0 1 0
chr7:22960256|22976305 DDX3X 1 0 0
chr7:22960256|22976305 SMNDC1 1 0 1
chr7:22960256|22976305 ACIN1 0 0 1
chr7:22960256|22976305 LIN28B 1 0 4
chr7:22960256|22976305 LIN28A 1 0 1
chr7:22960256|22976305 FXR1 0 0 1
chr7:22960256|22976305 IGF2BP1 1 0 1
chr7:22960256|22976305 IGF2BP2 10 8 2
chr7:22960256|22976305 TARDBP 1 3 0
chr7:22960256|22976305 BUD13 1 0 1
chr7:22960256|22976305 RBM47 0 0 3
chr7:22960256|22976305 CSTF2T 0 3 0
chr7:22960256|22976305 CSTF2 0 2 0
chr7:22960256|22976305 RBM22 2 2 0
chr7:22960256|22976305 AGO2 1 0 4
chr7:22960256|22976305 EIF4A3 4 2 4
chr7:22960256|22976305 FBL 0 0 2