CircRNA Information

General Information
circRNA Basic Information
CircID chr7:23190941|23191106
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence TGCCAACCTTGTTCTTACCTCAGGGCCTTTGCAATAGCTAGTCCTACTGCCAGGAATGTTTTCCCCAAATCTTCCCATAACTGATACCCTCTCTTTATTCAGGACTCATTTCCAATACTGTCTCCCAGGAATAGATAACCACTCTATCTAAAGAAATATTGTTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:23190941|23191106 hsa-let-7b-5p 0 0 1
chr7:23190941|23191106 hsa-let-7b-3p 0 0 1
chr7:23190941|23191106 hsa-let-7c-5p 0 0 1
chr7:23190941|23191106 hsa-let-7c-3p 0 0 1
chr7:23190941|23191106 hsa-let-7d-5p 0 0 1
chr7:23190941|23191106 hsa-let-7d-3p 0 0 1
chr7:23190941|23191106 hsa-let-7e-5p 0 0 1
chr7:23190941|23191106 hsa-let-7e-3p 0 0 1
chr7:23190941|23191106 hsa-miR-25-5p 0 0 1
chr7:23190941|23191106 hsa-miR-25-3p 0 0 1
chr7:23190941|23191106 hsa-miR-32-5p 0 0 1
chr7:23190941|23191106 hsa-miR-32-3p 0 0 1
chr7:23190941|23191106 hsa-miR-98-5p 0 0 1
chr7:23190941|23191106 hsa-miR-98-3p 0 0 1
chr7:23190941|23191106 hsa-miR-34a-5p 0 0 1
chr7:23190941|23191106 hsa-miR-34a-3p 0 0 1
chr7:23190941|23191106 hsa-let-7g-5p 0 0 1
chr7:23190941|23191106 hsa-let-7g-3p 0 0 1
chr7:23190941|23191106 hsa-let-7i-5p 0 0 1
chr7:23190941|23191106 hsa-let-7i-3p 0 0 1
chr7:23190941|23191106 hsa-miR-144-5p 0 0 1
chr7:23190941|23191106 hsa-miR-144-3p 0 0 1
chr7:23190941|23191106 hsa-miR-363-5p 0 0 1
chr7:23190941|23191106 hsa-miR-363-3p 0 0 1
chr7:23190941|23191106 hsa-miR-367-5p 0 0 1
chr7:23190941|23191106 hsa-miR-367-3p 0 0 1
chr7:23190941|23191106 hsa-miR-449a 0 0 1
chr7:23190941|23191106 hsa-miR-202-5p 0 0 1
chr7:23190941|23191106 hsa-miR-202-3p 0 0 1
chr7:23190941|23191106 hsa-miR-527 0 0 1
chr7:23190941|23191106 hsa-miR-92b-5p 0 0 1
chr7:23190941|23191106 hsa-miR-92b-3p 0 0 1
chr7:23190941|23191106 hsa-miR-570-5p 0 0 1
chr7:23190941|23191106 hsa-miR-570-3p 0 0 1
chr7:23190941|23191106 hsa-miR-583 0 0 1
chr7:23190941|23191106 hsa-miR-624-5p 0 0 1
chr7:23190941|23191106 hsa-miR-624-3p 0 0 1
chr7:23190941|23191106 hsa-miR-449b-5p 0 0 1
chr7:23190941|23191106 hsa-miR-449b-3p 0 0 1
chr7:23190941|23191106 hsa-miR-543 0 0 1
chr7:23190941|23191106 hsa-miR-935 0 0 1
chr7:23190941|23191106 hsa-miR-1291 1 1 1
chr7:23190941|23191106 hsa-miR-1276 0 0 1
chr7:23190941|23191106 hsa-miR-140-5p 0 0 1
chr7:23190941|23191106 hsa-miR-338-5p 0 0 1
chr7:23190941|23191106 hsa-miR-125a-5p 0 0 1
chr7:23190941|23191106 hsa-miR-34c-5p 1 0 1
chr7:23190941|23191106 hsa-miR-518a-5p 0 0 1
chr7:23190941|23191106 hsa-miR-548b-3p 0 0 1
chr7:23190941|23191106 hsa-miR-125b 0 0 1
chr7:23190941|23191106 hsa-let-7a 0 0 1
chr7:23190941|23191106 hsa-let-7f 0 0 1
chr7:23190941|23191106 hsa-miR-92a 0 0 1
chr7:23190941|23191106 hsa-miR-198 1 0 0
chr7:23190941|23191106 hsa-miR-760 1 0 0
chr7:23190941|23191106 hsa-miR-2110 1 0 0
chr7:23190941|23191106 hsa-miR-3154 1 0 0
chr7:23190941|23191106 hsa-miR-3155a 1 0 0
chr7:23190941|23191106 hsa-miR-4271 1 0 0
chr7:23190941|23191106 hsa-miR-3612 0 1 0
chr7:23190941|23191106 hsa-miR-4692 1 0 0
chr7:23190941|23191106 hsa-miR-4739 1 0 0
chr7:23190941|23191106 hsa-miR-4748 1 1 0
chr7:23190941|23191106 hsa-miR-4759 0 1 0
chr7:23190941|23191106 hsa-miR-5093 1 1 0
chr7:23190941|23191106 hsa-miR-5194 1 0 0
chr7:23190941|23191106 hsa-miR-5572 1 0 0
chr7:23190941|23191106 hsa-miR-6127 1 0 0
chr7:23190941|23191106 hsa-miR-8057 1 0 0
chr7:23190941|23191106 hsa-miR-8073 1 1 0
chr7:23190941|23191106 hsa-miR-4433b-3p 1 0 0
chr7:23190941|23191106 hsa-miR-6734-5p 1 0 0
chr7:23190941|23191106 hsa-miR-7106-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6894-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6804-5p 1 0 0
chr7:23190941|23191106 hsa-miR-7851-3p 1 0 0
chr7:23190941|23191106 hsa-miR-6515-5p 1 0 0
chr7:23190941|23191106 hsa-miR-3192-5p 1 1 0
chr7:23190941|23191106 hsa-miR-4722-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6871-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6732-5p 1 0 0
chr7:23190941|23191106 hsa-miR-2467-3p 1 0 0
chr7:23190941|23191106 hsa-miR-5008-5p 1 0 0
chr7:23190941|23191106 hsa-miR-5006-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6852-5p 1 0 0
chr7:23190941|23191106 hsa-miR-204-3p 1 0 0
chr7:23190941|23191106 hsa-miR-149-3p 1 0 0
chr7:23190941|23191106 hsa-miR-194-3p 1 0 0
chr7:23190941|23191106 hsa-miR-7162-3p 0 1 0
chr7:23190941|23191106 hsa-miR-4727-3p 1 0 0
chr7:23190941|23191106 hsa-miR-6832-5p 1 0 0
chr7:23190941|23191106 hsa-miR-532-5p 1 0 0
chr7:23190941|23191106 hsa-miR-7113-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6503-3p 0 1 0
chr7:23190941|23191106 hsa-miR-4763-3p 1 0 0
chr7:23190941|23191106 hsa-miR-6812-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6870-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6754-5p 1 0 0
chr7:23190941|23191106 hsa-miR-10401-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6763-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6779-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6780a-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6788-5p 0 1 0
chr7:23190941|23191106 hsa-miR-5196-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6780b-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6794-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6795-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6883-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6887-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6758-5p 1 1 0
chr7:23190941|23191106 hsa-miR-6856-5p 0 1 0
chr7:23190941|23191106 hsa-miR-3679-5p 1 0 0
chr7:23190941|23191106 hsa-miR-4646-5p 1 0 0
chr7:23190941|23191106 hsa-miR-4667-5p 1 0 0
chr7:23190941|23191106 hsa-miR-6791-5p 1 0 0
chr7:23190941|23191106 hsa-miR-4661-5p 0 1 0
chr7:23190941|23191106 hsa-miR-147b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:23190941|23191106
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MPGMFSPNLPITDTLSLFRTHFQYCLPGIDNHSI
Nucleotide Sequence CTGCCAGGAATGTTTTCCCCAAATCTTCCCATAACTGATACCCTCTCTTTATTCAGGACTCATTTCCAATACTGTCTCCCAGGAATAGATAACCACTCTATCTAA
CircID chr7:23190941|23191106
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MNKERVSVMGRFGENIPGSRTSYCKGPEVRTRLA
Nucleotide Sequence CTGAATAAAGAGAGGGTATCAGTTATGGGAAGATTTGGGGAAAACATTCCTGGCAGTAGGACTAGCTATTGCAAAGGCCCTGAGGTAAGAACAAGGTTGGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab