CircRNA Information

General Information
circRNA Basic Information
CircID chr7:26193251|26193614
Strand -
CircType exon
Host Gene ENSG00000122566.19;
Algorism CIRI2;
Sequence CTCCACCATATGGTCCCCCCATGTTCCTGCTACCACCAAAGTTTCCACTCTTCATTGGACCGTAGTTAGAAGGTTGCTGGTTATAATTTCCAAAATCATTGTAATTTCCACTTCCATAATTTCCTATTAAAAAATTGGAATACTCAGAACAATACAAACATTAAACCAAGGACTTAGGACAAAGCTCCCATAAAAACAAATAAAAGCAAACACTTATCCACAAATTTTATGGGCATCTAGTGACAAACATGGAAACAAAAGATCAAGTGTTACAAAGACATTAATTCCAAATTCCCACATAAAGGTTGCAGGTGAATTTATTACCTCCTCCATAGTTGTCATAACCACCTCCGTAGCCCCCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:26193251|26193614 hsa-miR-141-5p 0 0 1
chr7:26193251|26193614 hsa-miR-141-3p 0 0 1
chr7:26193251|26193614 hsa-miR-200a-5p 0 0 1
chr7:26193251|26193614 hsa-miR-200a-3p 0 0 1
chr7:26193251|26193614 hsa-miR-425-5p 0 0 1
chr7:26193251|26193614 hsa-miR-425-3p 0 0 1
chr7:26193251|26193614 hsa-miR-511-5p 0 0 1
chr7:26193251|26193614 hsa-miR-511-3p 0 0 1
chr7:26193251|26193614 hsa-miR-496 0 0 1
chr7:26193251|26193614 hsa-miR-587 0 0 1
chr7:26193251|26193614 hsa-miR-595 0 0 1
chr7:26193251|26193614 hsa-miR-606 0 0 1
chr7:26193251|26193614 hsa-miR-633 0 0 1
chr7:26193251|26193614 hsa-miR-634 0 1 1
chr7:26193251|26193614 hsa-miR-668-5p 0 0 1
chr7:26193251|26193614 hsa-miR-668-3p 0 0 1
chr7:26193251|26193614 hsa-miR-765 0 0 1
chr7:26193251|26193614 hsa-miR-873-5p 0 0 1
chr7:26193251|26193614 hsa-miR-873-3p 0 0 1
chr7:26193251|26193614 hsa-miR-920 0 0 1
chr7:26193251|26193614 hsa-miR-1261 0 0 1
chr7:26193251|26193614 hsa-miR-28-3p 0 0 1
chr7:26193251|26193614 hsa-miR-299-3p 0 0 1
chr7:26193251|26193614 hsa-miR-876-3p 0 0 1
chr7:26193251|26193614 hsa-miR-409-3p 0 0 1
chr7:26193251|26193614 hsa-miR-299-5p 0 0 1
chr7:26193251|26193614 hsa-miR-323-5p 0 0 1
chr7:26193251|26193614 hsa-miR-9 0 0 1
chr7:26193251|26193614 hsa-miR-549 0 0 1
chr7:26193251|26193614 hsa-miR-194 0 0 1
chr7:26193251|26193614 hsa-miR-608 1 1 0
chr7:26193251|26193614 hsa-miR-637 1 0 0
chr7:26193251|26193614 hsa-miR-1202 1 0 0
chr7:26193251|26193614 hsa-miR-1268a 1 0 0
chr7:26193251|26193614 hsa-miR-4263 1 1 0
chr7:26193251|26193614 hsa-miR-1268b 1 0 0
chr7:26193251|26193614 hsa-miR-4447 1 1 0
chr7:26193251|26193614 hsa-miR-4450 1 0 0
chr7:26193251|26193614 hsa-miR-4481 1 0 0
chr7:26193251|26193614 hsa-miR-4515 1 0 0
chr7:26193251|26193614 hsa-miR-4534 1 0 0
chr7:26193251|26193614 hsa-miR-4656 1 0 0
chr7:26193251|26193614 hsa-miR-4657 1 0 0
chr7:26193251|26193614 hsa-miR-4689 1 0 0
chr7:26193251|26193614 hsa-miR-4739 1 0 0
chr7:26193251|26193614 hsa-miR-4779 0 1 0
chr7:26193251|26193614 hsa-miR-4784 1 0 0
chr7:26193251|26193614 hsa-miR-4788 1 0 0
chr7:26193251|26193614 hsa-miR-5192 1 0 0
chr7:26193251|26193614 hsa-miR-5698 1 0 0
chr7:26193251|26193614 hsa-miR-5787 1 0 0
chr7:26193251|26193614 hsa-miR-6079 1 0 0
chr7:26193251|26193614 hsa-miR-6133 1 0 0
chr7:26193251|26193614 hsa-miR-6165 1 1 0
chr7:26193251|26193614 hsa-miR-12115 1 0 0
chr7:26193251|26193614 hsa-miR-12118 1 0 0
chr7:26193251|26193614 hsa-miR-4433b-3p 1 0 0
chr7:26193251|26193614 hsa-miR-4433a-3p 1 0 0
chr7:26193251|26193614 hsa-miR-7106-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6825-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6894-5p 1 0 0
chr7:26193251|26193614 hsa-miR-766-5p 1 1 0
chr7:26193251|26193614 hsa-miR-6833-5p 1 0 0
chr7:26193251|26193614 hsa-miR-7114-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6515-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6880-5p 1 0 0
chr7:26193251|26193614 hsa-miR-7847-3p 1 0 0
chr7:26193251|26193614 hsa-miR-7154-3p 1 0 0
chr7:26193251|26193614 hsa-miR-7845-5p 1 1 0
chr7:26193251|26193614 hsa-miR-6829-5p 1 0 0
chr7:26193251|26193614 hsa-miR-1224-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6760-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6782-5p 1 0 0
chr7:26193251|26193614 hsa-miR-3150b-3p 1 1 0
chr7:26193251|26193614 hsa-miR-885-3p 1 0 0
chr7:26193251|26193614 hsa-miR-4787-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6824-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6826-5p 1 0 0
chr7:26193251|26193614 hsa-miR-4772-3p 0 1 0
chr7:26193251|26193614 hsa-miR-6773-3p 1 0 0
chr7:26193251|26193614 hsa-miR-597-5p 0 1 0
chr7:26193251|26193614 hsa-miR-98-5p 0 1 0
chr7:26193251|26193614 hsa-miR-676-3p 1 1 0
chr7:26193251|26193614 hsa-miR-6778-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6865-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6870-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6726-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6737-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6752-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6756-5p 0 1 0
chr7:26193251|26193614 hsa-miR-6769a-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6803-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6815-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6851-5p 1 1 0
chr7:26193251|26193614 hsa-miR-7110-5p 1 0 0
chr7:26193251|26193614 hsa-miR-10401-5p 1 0 0
chr7:26193251|26193614 hsa-miR-11181-3p 0 1 0
chr7:26193251|26193614 hsa-miR-1249-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6751-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6797-5p 1 0 0
chr7:26193251|26193614 hsa-miR-7111-5p 1 0 0
chr7:26193251|26193614 hsa-miR-4728-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6780b-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6794-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6795-5p 0 1 0
chr7:26193251|26193614 hsa-miR-6846-5p 1 1 0
chr7:26193251|26193614 hsa-miR-6848-5p 1 1 0
chr7:26193251|26193614 hsa-miR-6858-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6887-5p 0 1 0
chr7:26193251|26193614 hsa-miR-939-5p 1 0 0
chr7:26193251|26193614 hsa-miR-6856-5p 1 0 0
chr7:26193251|26193614 hsa-miR-4665-5p 1 0 0
chr7:26193251|26193614 hsa-miR-3173-3p 1 0 0
chr7:26193251|26193614 hsa-miR-3679-5p 1 0 0
chr7:26193251|26193614 hsa-miR-4716-3p 1 0 0
chr7:26193251|26193614 hsa-miR-6849-5p 1 0 0
chr7:26193251|26193614 hsa-miR-5591-5p 0 1 0
chr7:26193251|26193614 hsa-miR-487a-5p 0 1 0
chr7:26193251|26193614 hsa-miR-549a-3p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:26193251|26193614
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MYCSEYSNFLIGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGG
Nucleotide Sequence TTGTATTGTTCTGAGTATTCCAATTTTTTAATAGGAAATTATGGAAGTGGAAATTACAATGATTTTGGAAATTATAACCAGCAACCTTCTAACTACGGTCCAATGAAGAGTGGAAACTTTGGTGGTAGCAGGAACATGGGGGGACCATATGGTGGA
CircID chr7:26193251|26193614
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MTTMEEVINSPATFMWEFGINVFVTLDLLFPCLSLDAHKICG
Nucleotide Sequence ATGACAACTATGGAGGAGGTAATAAATTCACCTGCAACCTTTATGTGGGAATTTGGAATTAATGTCTTTGTAACACTTGATCTTTTGTTTCCATGTTTGTCACTAGATGCCCATAAAATTTGTGGATAA
CircID chr7:26193251|26193614
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MLVIISKIIVISTSIISSSIVVITTSVAPT
Nucleotide Sequence TTGCTGGTTATAATTTCCAAAATCATTGTAATTTCCACTTCCATAATTTCCTCCTCCATAGTTGTCATAACCACCTCCGTAGCCCCCACC
CircID chr7:26193251|26193614
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MTTMEEEIMEVEITMILEIITSNLLTTVQ
Nucleotide Sequence ATGACAACTATGGAGGAGGAAATTATGGAAGTGGAAATTACAATGATTTTGGAAATTATAACCAGCAACCTTCTAACTACGGTCCAATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab