CircRNA Information

General Information
circRNA Basic Information
CircID chr7:26844030|26854890
Strand -
CircType exon
Host Gene ENSG00000005020.12;
Algorism find_circ;CIRI2;DCC;
Sequence ATGTTGAAACATTTGTAGCAGATATACTGAAAGGAGAAAATTTATCCAAGAAAGCAAAGGAAAAGAGAGAATCCCTTATTAAGAAGATAAAAGATGTAAAGTCTATCTATCTTCAGGAATTTCAAGACAAAGATTTGAGAGACAGCTGCTTAGCAGACTGAAAACCAGATCAGGAAAGAAAAATATGCTGCTGTAGTATGATTAAACCTTGAGTTTGTTGCAATGTTTGTTACTACTGAAATTATAGGAAGGTAAATGTAAACATCACACTGATTTAAAAAAAAAAATACTTGCAGTGAGCTGCAATTCTTAGAATGGGTGATGCAGAAGATGGGGAAGAATATGATGACCCTTTTGCTGGGCCTCCAGACACTATTTCATTAGCCTCAGAACGATATGATAAAGACGATGAAGCCCCCTCTGATG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:26844030|26854890 hsa-miR-488-5p 0 0 1
chr7:26844030|26854890 hsa-miR-488-3p 0 0 1
chr7:26844030|26854890 hsa-miR-494-5p 0 0 1
chr7:26844030|26854890 hsa-miR-494-3p 0 0 1
chr7:26844030|26854890 hsa-miR-498-5p 0 0 1
chr7:26844030|26854890 hsa-miR-498-3p 0 0 1
chr7:26844030|26854890 hsa-miR-504-5p 0 0 1
chr7:26844030|26854890 hsa-miR-504-3p 0 0 1
chr7:26844030|26854890 hsa-miR-577 0 0 1
chr7:26844030|26854890 hsa-miR-653-5p 0 0 1
chr7:26844030|26854890 hsa-miR-653-3p 0 0 1
chr7:26844030|26854890 hsa-miR-298 1 0 1
chr7:26844030|26854890 hsa-miR-873-5p 0 0 1
chr7:26844030|26854890 hsa-miR-873-3p 0 0 1
chr7:26844030|26854890 hsa-miR-1272 0 0 1
chr7:26844030|26854890 hsa-miR-1322 0 0 1
chr7:26844030|26854890 hsa-miR-188-5p 0 0 1
chr7:26844030|26854890 hsa-miR-765 1 0 0
chr7:26844030|26854890 hsa-miR-3154 1 0 0
chr7:26844030|26854890 hsa-miR-4271 1 0 0
chr7:26844030|26854890 hsa-miR-4436a 1 0 0
chr7:26844030|26854890 hsa-miR-4484 1 0 0
chr7:26844030|26854890 hsa-miR-4533 1 0 0
chr7:26844030|26854890 hsa-miR-4739 1 0 0
chr7:26844030|26854890 hsa-miR-6165 1 0 0
chr7:26844030|26854890 hsa-miR-9500 1 0 0
chr7:26844030|26854890 hsa-miR-6765-5p 1 0 0
chr7:26844030|26854890 hsa-miR-3150a-3p 1 0 0
chr7:26844030|26854890 hsa-miR-6857-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6833-5p 1 0 0
chr7:26844030|26854890 hsa-miR-4722-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6820-5p 1 0 0
chr7:26844030|26854890 hsa-miR-3180-3p 1 0 0
chr7:26844030|26854890 hsa-miR-6732-5p 1 0 0
chr7:26844030|26854890 hsa-miR-2467-3p 1 0 0
chr7:26844030|26854890 hsa-miR-6850-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6786-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6771-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6847-5p 1 0 0
chr7:26844030|26854890 hsa-miR-7854-3p 1 0 0
chr7:26844030|26854890 hsa-miR-6824-5p 1 0 0
chr7:26844030|26854890 hsa-miR-3180 1 0 0
chr7:26844030|26854890 hsa-miR-6737-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6803-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6815-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6819-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6751-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6763-5p 1 0 0
chr7:26844030|26854890 hsa-miR-7111-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6780b-5p 1 0 0
chr7:26844030|26854890 hsa-miR-4701-3p 1 0 0
chr7:26844030|26854890 hsa-miR-675-5p 1 0 0
chr7:26844030|26854890 hsa-miR-6511a-5p 1 0 0
chr7:26844030|26854890 hsa-miR-4747-5p 1 0 0
chr7:26844030|26854890 hsa-miR-3617-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:26844030|26854890
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MEAQQKGHHILPHLLHHLCLEIPEDR
Nucleotide Sequence CTGGAGGCCCAGCAAAAGGGTCATCATATTCTTCCCCATCTTCTGCATCACCTTTGTCTTGAAATTCCTGAAGATAGATAG

CircID chr7:26844030|26854890
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MKFLKIDRLYIFYLLNKGFSLFLCFLG
Nucleotide Sequence TTGAAATTCCTGAAGATAGATAGACTTTACATCTTTTATCTTCTTAATAAGGGATTCTCTCTTTTCCTTTGCTTTCTTGGATAA

CircID chr7:26844030|26854890
ORF Type ORF3
Protein Length 71
Nucleotide Length 213
Protein Sequence MKGENLSKKAKEKRESLIKKIKDVKSIYLQEFQDKGDAEDGEEYDDPFAGPPDTISLASERYDKDDEAPSD
Nucleotide Sequence CTGAAAGGAGAAAATTTATCCAAGAAAGCAAAGGAAAAGAGAGAATCCCTTATTAAGAAGATAAAAGATGTAAAGTCTATCTATCTTCAGGAATTTCAAGACAAAGGTGATGCAGAAGATGGGGAAGAATATGATGACCCTTTTGCTGGGCCTCCAGACACTATTTCATTAGCCTCAGAACGATATGATAAAGACGATGAAGCCCCCTCTGAT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr7:26844030|26854890 ELAVL1 0 2 0
chr7:26844030|26854890 QKI 1 0 0
chr7:26844030|26854890 U2AF2 1 6 4
chr7:26844030|26854890 BUD13 0 0 1
chr7:26844030|26854890 NOP58 0 0 3
chr7:26844030|26854890 SRSF3 0 1 0
chr7:26844030|26854890 SMNDC1 0 0 1
chr7:26844030|26854890 NOP56 0 1 0
chr7:26844030|26854890 IGF2BP2 0 1 0
chr7:26844030|26854890 ACIN1 0 3 4
chr7:26844030|26854890 LIN28B 0 2 3
chr7:26844030|26854890 DDX54 0 0 1
chr7:26844030|26854890 FUS 0 2 0
chr7:26844030|26854890 PRPF8 0 2 1
chr7:26844030|26854890 TIAL1 0 1 0
chr7:26844030|26854890 HNRNPC 0 1 0
chr7:26844030|26854890 FBL 0 0 1
chr7:26844030|26854890 EIF4A3 3 5 5
chr7:26844030|26854890 AGO2 1 0 1