CircRNA Information

General Information
circRNA Basic Information
CircID chr7:27182220|27182335
Strand -
CircType exon
Host Gene ENSG00000005073.5;
Algorism CIRI2;
Sequence CTGGAATCATAGATTTCTTTTCCCACAAGGATTTGCAGCCCTCTTCCACCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCAC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:27182220|27182335 hsa-let-7b-5p 0 0 1
chr7:27182220|27182335 hsa-let-7b-3p 0 0 1
chr7:27182220|27182335 hsa-let-7c-5p 0 0 1
chr7:27182220|27182335 hsa-let-7c-3p 0 0 1
chr7:27182220|27182335 hsa-let-7d-5p 0 0 1
chr7:27182220|27182335 hsa-let-7d-3p 0 0 1
chr7:27182220|27182335 hsa-let-7e-5p 0 0 1
chr7:27182220|27182335 hsa-let-7e-3p 0 0 1
chr7:27182220|27182335 hsa-miR-98-5p 0 0 1
chr7:27182220|27182335 hsa-miR-98-3p 0 0 1
chr7:27182220|27182335 hsa-let-7g-5p 0 0 1
chr7:27182220|27182335 hsa-let-7g-3p 0 0 1
chr7:27182220|27182335 hsa-let-7i-5p 0 0 1
chr7:27182220|27182335 hsa-let-7i-3p 0 0 1
chr7:27182220|27182335 hsa-miR-422a 0 1 1
chr7:27182220|27182335 hsa-miR-432-5p 0 0 1
chr7:27182220|27182335 hsa-miR-432-3p 0 0 1
chr7:27182220|27182335 hsa-miR-890 0 0 1
chr7:27182220|27182335 hsa-miR-1304-5p 0 0 1
chr7:27182220|27182335 hsa-miR-1304-3p 0 0 1
chr7:27182220|27182335 hsa-miR-485-5p 0 0 1
chr7:27182220|27182335 hsa-miR-362-5p 0 0 1
chr7:27182220|27182335 hsa-miR-7 0 0 1
chr7:27182220|27182335 hsa-miR-378 0 0 1
chr7:27182220|27182335 hsa-let-7a 0 0 1
chr7:27182220|27182335 hsa-let-7f 0 0 1
chr7:27182220|27182335 hsa-miR-500 0 0 1
chr7:27182220|27182335 hsa-miR-768-5p 0 0 1
chr7:27182220|27182335 hsa-miR-608 1 0 0
chr7:27182220|27182335 hsa-miR-658 1 0 0
chr7:27182220|27182335 hsa-miR-378b 1 1 0
chr7:27182220|27182335 hsa-miR-3138 1 0 0
chr7:27182220|27182335 hsa-miR-3188 1 0 0
chr7:27182220|27182335 hsa-miR-378c 1 1 0
chr7:27182220|27182335 hsa-miR-3652 0 1 0
chr7:27182220|27182335 hsa-miR-1268b 1 0 0
chr7:27182220|27182335 hsa-miR-378e 0 1 0
chr7:27182220|27182335 hsa-miR-378f 0 1 0
chr7:27182220|27182335 hsa-miR-378g 0 1 0
chr7:27182220|27182335 hsa-miR-4458 1 1 0
chr7:27182220|27182335 hsa-miR-378h 0 1 0
chr7:27182220|27182335 hsa-miR-4505 1 0 0
chr7:27182220|27182335 hsa-miR-4507 1 0 0
chr7:27182220|27182335 hsa-miR-378i 0 1 0
chr7:27182220|27182335 hsa-miR-4538 1 0 0
chr7:27182220|27182335 hsa-miR-4651 1 0 0
chr7:27182220|27182335 hsa-miR-4721 1 1 0
chr7:27182220|27182335 hsa-miR-5572 1 1 0
chr7:27182220|27182335 hsa-miR-6077 0 1 0
chr7:27182220|27182335 hsa-miR-378j 0 1 0
chr7:27182220|27182335 hsa-miR-6134 1 0 0
chr7:27182220|27182335 hsa-miR-6745 1 1 0
chr7:27182220|27182335 hsa-miR-8085 1 0 0
chr7:27182220|27182335 hsa-miR-12114 0 1 0
chr7:27182220|27182335 hsa-miR-6765-5p 1 0 0
chr7:27182220|27182335 hsa-miR-7106-5p 1 0 0
chr7:27182220|27182335 hsa-miR-8071 1 0 0
chr7:27182220|27182335 hsa-miR-6833-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6880-5p 1 0 0
chr7:27182220|27182335 hsa-miR-4722-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6762-3p 0 1 0
chr7:27182220|27182335 hsa-miR-6742-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6796-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6782-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6835-5p 1 0 0
chr7:27182220|27182335 hsa-miR-30c-2-3p 1 0 0
chr7:27182220|27182335 hsa-miR-1233-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6769b-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6812-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6865-5p 1 0 0
chr7:27182220|27182335 hsa-miR-5001-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6803-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6815-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6819-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6851-5p 1 0 0
chr7:27182220|27182335 hsa-miR-1249-5p 1 0 0
chr7:27182220|27182335 hsa-miR-3620-5p 1 0 0
chr7:27182220|27182335 hsa-miR-10526-3p 1 0 0
chr7:27182220|27182335 hsa-miR-6846-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6858-5p 1 0 0
chr7:27182220|27182335 hsa-miR-6831-5p 1 0 0
chr7:27182220|27182335 hsa-miR-939-5p 1 0 0
chr7:27182220|27182335 hsa-miR-30c-1-3p 1 1 0
chr7:27182220|27182335 hsa-miR-6736-5p 1 0 0
chr7:27182220|27182335 hsa-miR-378a-3p 1 1 0
chr7:27182220|27182335 hsa-miR-5009-5p 0 1 0
chr7:27182220|27182335 hsa-miR-378d 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:27182220|27182335
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MQPSSTSKLPPSPAAVHIGFGKQPHSGH
Nucleotide Sequence TTGCAGCCCTCTTCCACCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab