CircRNA Information

General Information
circRNA Basic Information
CircID chr7:30452616|30452945
Strand -
CircType exon
Host Gene ENSG00000106100.9;
Algorism CIRI2;
Sequence CTCCTCGGGGTCCCGCTCTGGGTAGCAGTAGTGCTTGAAGAGCAGGTCCTGCAGACACAGCCTGTCACTTTCCTTGAAGCAGCTGAACATGCGGCAGCGAAAGTGGAAGAAGAATTTGACCCCTGCGTCTAGCCGGCCCGTGGCCCAGAGGCTCTGCAGCCGCTGTAGCAGCATGGACTTGCCCACCCCAGCATCACCCAGGATGAAGATGGTCTCACCCTGCTCATTGAGGATGCCGGTGGTGTGGTCCAGGAGGCAGGCCAGGCTGTTCAGGCTGCCCAGGCTCTCATTGCTGAAGCCAACCAGCTCCATGATGGTGTCCATGTAGAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:30452616|30452945 hsa-miR-221-5p 0 0 1
chr7:30452616|30452945 hsa-miR-221-3p 0 0 1
chr7:30452616|30452945 hsa-miR-222-5p 0 0 1
chr7:30452616|30452945 hsa-miR-222-3p 0 0 1
chr7:30452616|30452945 hsa-miR-326 0 1 1
chr7:30452616|30452945 hsa-miR-346 0 0 1
chr7:30452616|30452945 hsa-miR-492 0 1 1
chr7:30452616|30452945 hsa-miR-498-5p 0 0 1
chr7:30452616|30452945 hsa-miR-498-3p 0 0 1
chr7:30452616|30452945 hsa-miR-545-5p 0 0 1
chr7:30452616|30452945 hsa-miR-545-3p 0 0 1
chr7:30452616|30452945 hsa-miR-608 0 1 1
chr7:30452616|30452945 hsa-miR-612 0 1 1
chr7:30452616|30452945 hsa-miR-632 0 0 1
chr7:30452616|30452945 hsa-miR-639 0 1 1
chr7:30452616|30452945 hsa-miR-661 1 1 1
chr7:30452616|30452945 hsa-miR-541-5p 0 0 1
chr7:30452616|30452945 hsa-miR-541-3p 0 0 1
chr7:30452616|30452945 hsa-miR-1205 0 1 1
chr7:30452616|30452945 hsa-miR-1286 0 0 1
chr7:30452616|30452945 hsa-miR-1262 0 0 1
chr7:30452616|30452945 hsa-miR-769-5p 0 0 1
chr7:30452616|30452945 hsa-miR-1184 0 0 1
chr7:30452616|30452945 hsa-miR-654-5p 0 0 1
chr7:30452616|30452945 hsa-miR-490-5p 0 0 1
chr7:30452616|30452945 hsa-miR-1207-3p 0 0 1
chr7:30452616|30452945 hsa-miR-342-5p 0 0 1
chr7:30452616|30452945 hsa-miR-330-5p 0 1 1
chr7:30452616|30452945 hsa-miR-542-3p 0 1 1
chr7:30452616|30452945 hsa-miR-151-5p 0 0 1
chr7:30452616|30452945 hsa-miR-220b 0 0 1
chr7:30452616|30452945 hsa-miR-1285 0 0 1
chr7:30452616|30452945 hsa-miR-762 1 0 0
chr7:30452616|30452945 hsa-miR-761 0 1 0
chr7:30452616|30452945 hsa-miR-4486 1 0 0
chr7:30452616|30452945 hsa-miR-4498 1 0 0
chr7:30452616|30452945 hsa-miR-4651 1 1 0
chr7:30452616|30452945 hsa-miR-4656 1 0 0
chr7:30452616|30452945 hsa-miR-4741 1 0 0
chr7:30452616|30452945 hsa-miR-6860 1 1 0
chr7:30452616|30452945 hsa-miR-7704 1 0 0
chr7:30452616|30452945 hsa-miR-12115 1 0 0
chr7:30452616|30452945 hsa-miR-6747-3p 0 1 0
chr7:30452616|30452945 hsa-miR-6510-5p 0 1 0
chr7:30452616|30452945 hsa-miR-3187-3p 1 0 0
chr7:30452616|30452945 hsa-miR-6776-5p 0 1 0
chr7:30452616|30452945 hsa-miR-6874-5p 0 1 0
chr7:30452616|30452945 hsa-miR-4436b-5p 0 1 0
chr7:30452616|30452945 hsa-miR-1226-5p 1 1 0
chr7:30452616|30452945 hsa-miR-3944-3p 1 0 0
chr7:30452616|30452945 hsa-miR-4640-5p 1 0 0
chr7:30452616|30452945 hsa-miR-4743-5p 1 0 0
chr7:30452616|30452945 hsa-miR-2681-3p 0 1 0
chr7:30452616|30452945 hsa-miR-3690 0 1 0
chr7:30452616|30452945 hsa-miR-4446-3p 1 0 0
chr7:30452616|30452945 hsa-miR-6830-5p 0 1 0
chr7:30452616|30452945 hsa-miR-6781-5p 1 1 0
chr7:30452616|30452945 hsa-miR-3678-3p 0 1 0
chr7:30452616|30452945 hsa-miR-3619-3p 0 1 0
chr7:30452616|30452945 hsa-miR-4778-3p 0 1 0
chr7:30452616|30452945 hsa-miR-2114-3p 0 1 0
chr7:30452616|30452945 hsa-miR-1255b-2-3p 0 1 0
chr7:30452616|30452945 hsa-miR-4712-3p 0 1 0
chr7:30452616|30452945 hsa-miR-10400-5p 1 0 0
chr7:30452616|30452945 hsa-miR-1207-5p 1 0 0
chr7:30452616|30452945 hsa-miR-4763-3p 1 0 0
chr7:30452616|30452945 hsa-miR-6787-5p 1 0 0
chr7:30452616|30452945 hsa-miR-6816-5p 1 0 0
chr7:30452616|30452945 hsa-miR-5001-5p 1 0 0
chr7:30452616|30452945 hsa-miR-6737-5p 0 1 0
chr7:30452616|30452945 hsa-miR-6743-5p 1 0 0
chr7:30452616|30452945 hsa-miR-6756-5p 1 0 0
chr7:30452616|30452945 hsa-miR-6803-5p 1 0 0
chr7:30452616|30452945 hsa-miR-6813-5p 1 0 0
chr7:30452616|30452945 hsa-miR-6819-5p 0 1 0
chr7:30452616|30452945 hsa-miR-6722-3p 1 1 0
chr7:30452616|30452945 hsa-miR-6808-5p 1 0 0
chr7:30452616|30452945 hsa-miR-1915-3p 1 0 0
chr7:30452616|30452945 hsa-miR-3620-5p 1 0 0
chr7:30452616|30452945 hsa-miR-5189-5p 1 1 0
chr7:30452616|30452945 hsa-miR-6836-5p 1 1 0
chr7:30452616|30452945 hsa-miR-1909-3p 0 1 0
chr7:30452616|30452945 hsa-miR-4632-5p 1 0 0
chr7:30452616|30452945 hsa-miR-4701-3p 0 1 0
chr7:30452616|30452945 hsa-miR-4745-5p 0 1 0
chr7:30452616|30452945 hsa-miR-6848-5p 1 0 0
chr7:30452616|30452945 hsa-miR-3187-5p 0 1 0
chr7:30452616|30452945 hsa-miR-939-5p 1 0 0
chr7:30452616|30452945 hsa-miR-5586-3p 0 1 0
chr7:30452616|30452945 hsa-miR-10396a-3p 1 0 0
chr7:30452616|30452945 hsa-miR-6736-5p 0 1 0
chr7:30452616|30452945 hsa-miR-6791-3p 0 1 0
chr7:30452616|30452945 hsa-miR-6877-3p 0 1 0
chr7:30452616|30452945 hsa-miR-6876-5p 0 1 0
chr7:30452616|30452945 hsa-miR-6766-5p 0 1 0
chr7:30452616|30452945 hsa-miR-6724-5p 1 0 0
chr7:30452616|30452945 hsa-miR-6819-3p 0 1 0
chr7:30452616|30452945 hsa-miR-10394-5p 0 1 0
chr7:30452616|30452945 hsa-miR-1295b-5p 0 1 0
chr7:30452616|30452945 hsa-miR-1912-3p 0 1 0
chr7:30452616|30452945 hsa-miR-548ah-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:30452616|30452945
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MQTQPVTFLEAAEHAAAKVEEEFDPCV
Nucleotide Sequence CTGCAGACACAGCCTGTCACTTTCCTTGAAGCAGCTGAACATGCGGCAGCGAAAGTGGAAGAAGAATTTGACCCCTGCGTCTAG
CircID chr7:30452616|30452945
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MLIEDAGGVVQEAGQAVQAAQALIAEANQLHDGVHVD
Nucleotide Sequence CTGCTCATTGAGGATGCCGGTGGTGTGGTCCAGGAGGCAGGCCAGGCTGTTCAGGCTGCCCAGGCTCTCATTGCTGAAGCCAACCAGCTCCATGATGGTGTCCATGTAGAT
CircID chr7:30452616|30452945
ORF Type ORF3
Protein Length 97
Nucleotide Length 294
Protein Sequence MKSRSCRHSLSLSLKQLNMRQRKWKKNLTPASSRPVAQRLCSRCSSMDLPTPASPRMKMVSPCSLRMPVVWSRRQARLFRLPRLSLLKPTSSMMVSM
Nucleotide Sequence TTGAAGAGCAGGTCCTGCAGACACAGCCTGTCACTTTCCTTGAAGCAGCTGAACATGCGGCAGCGAAAGTGGAAGAAGAATTTGACCCCTGCGTCTAGCCGGCCCGTGGCCCAGAGGCTCTGCAGCCGCTGTAGCAGCATGGACTTGCCCACCCCAGCATCACCCAGGATGAAGATGGTCTCACCCTGCTCATTGAGGATGCCGGTGGTGTGGTCCAGGAGGCAGGCCAGGCTGTTCAGGCTGCCCAGGCTCTCATTGCTGAAGCCAACCAGCTCCATGATGGTGTCCATGTAG
CircID chr7:30452616|30452945
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MRLAGPWPRGSAAAVAAWTCPPQHHPG
Nucleotide Sequence CTGCGTCTAGCCGGCCCGTGGCCCAGAGGCTCTGCAGCCGCTGTAGCAGCATGGACTTGCCCACCCCAGCATCACCCAGGATGA
CircID chr7:30452616|30452945
ORF Type ORF5
Protein Length 108
Nucleotide Length 324
Protein Sequence MDTIMELVGFSNESLGSLNSLACLLDHTTGILNEQGETIFILGDAGVGKSMLLQRLQSLWATGRLDAGVKFFFHFRCRMFSCFKESDRLCLQDLLFKHYCYPERDPEE
Nucleotide Sequence ATGGACACCATCATGGAGCTGGTTGGCTTCAGCAATGAGAGCCTGGGCAGCCTGAACAGCCTGGCCTGCCTCCTGGACCACACCACCGGCATCCTCAATGAGCAGGGTGAGACCATCTTCATCCTGGGTGATGCTGGGGTGGGCAAGTCCATGCTGCTACAGCGGCTGCAGAGCCTCTGGGCCACGGGCCGGCTAGACGCAGGGGTCAAATTCTTCTTCCACTTTCGCTGCCGCATGTTCAGCTGCTTCAAGGAAAGTGACAGGCTGTGTCTGCAGGACCTGCTCTTCAAGCACTACTGCTACCCAGAGCGGGACCCCGAGGAG
CircID chr7:30452616|30452945
ORF Type ORF6
Protein Length 32
Nucleotide Length 99
Protein Sequence MSRVRPSSSWVMLGWASPCCYSGCRASGPRAG
Nucleotide Sequence ATGAGCAGGGTGAGACCATCTTCATCCTGGGTGATGCTGGGGTGGGCAAGTCCATGCTGCTACAGCGGCTGCAGAGCCTCTGGGCCACGGGCCGGCTAG
CircID chr7:30452616|30452945
ORF Type ORF7
Protein Length 27
Nucleotide Length 84
Protein Sequence MGHGPARRRGQILLPLSLPHVQLLQGK
Nucleotide Sequence CTGGGCCACGGGCCGGCTAGACGCAGGGGTCAAATTCTTCTTCCACTTTCGCTGCCGCATGTTCAGCTGCTTCAAGGAAAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab