CircRNA Information

General Information
circRNA Basic Information
CircID chr7:30925226|30925360
Strand +
CircType exon
Host Gene ENSG00000240583.9;
Algorism CIRI2;
Sequence TCTCCCCACTCCTGGCCCCTGGCCATTGCCCAGGCAGAAACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTTACTAGGCCTGGCCAAATCATTGTCTAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:30925226|30925360 hsa-miR-149-5p 0 0 1
chr7:30925226|30925360 hsa-miR-149-3p 0 0 1
chr7:30925226|30925360 hsa-miR-326 0 0 1
chr7:30925226|30925360 hsa-miR-588 0 0 1
chr7:30925226|30925360 hsa-miR-593-5p 0 0 1
chr7:30925226|30925360 hsa-miR-593-3p 0 0 1
chr7:30925226|30925360 hsa-miR-612 0 0 1
chr7:30925226|30925360 hsa-miR-661 0 1 1
chr7:30925226|30925360 hsa-miR-802 0 0 1
chr7:30925226|30925360 hsa-miR-665 0 0 1
chr7:30925226|30925360 hsa-miR-939-5p 0 0 1
chr7:30925226|30925360 hsa-miR-939-3p 0 0 1
chr7:30925226|30925360 hsa-miR-1291 0 0 1
chr7:30925226|30925360 hsa-miR-491-5p 0 0 1
chr7:30925226|30925360 hsa-miR-485-5p 0 0 1
chr7:30925226|30925360 hsa-miR-146b-3p 0 0 1
chr7:30925226|30925360 hsa-miR-339-5p 0 1 1
chr7:30925226|30925360 hsa-miR-628-3p 0 0 1
chr7:30925226|30925360 hsa-miR-330-5p 0 0 1
chr7:30925226|30925360 hsa-miR-1285 0 0 1
chr7:30925226|30925360 hsa-miR-544 0 0 1
chr7:30925226|30925360 hsa-miR-1254 0 0 1
chr7:30925226|30925360 hsa-miR-892b 0 1 0
chr7:30925226|30925360 hsa-miR-4421 0 1 0
chr7:30925226|30925360 hsa-miR-378i 0 1 0
chr7:30925226|30925360 hsa-miR-4794 0 1 0
chr7:30925226|30925360 hsa-miR-6860 0 1 0
chr7:30925226|30925360 hsa-miR-4435 0 1 0
chr7:30925226|30925360 hsa-miR-4433b-3p 0 1 0
chr7:30925226|30925360 hsa-miR-4433a-3p 0 1 0
chr7:30925226|30925360 hsa-miR-3677-5p 0 1 0
chr7:30925226|30925360 hsa-miR-6762-3p 0 1 0
chr7:30925226|30925360 hsa-miR-3191-5p 0 1 0
chr7:30925226|30925360 hsa-miR-6818-3p 0 1 0
chr7:30925226|30925360 hsa-miR-7111-3p 0 1 0
chr7:30925226|30925360 hsa-miR-4776-5p 0 1 0
chr7:30925226|30925360 hsa-miR-7160-3p 0 1 0
chr7:30925226|30925360 hsa-miR-6738-3p 0 1 0
chr7:30925226|30925360 hsa-miR-5189-5p 0 1 0
chr7:30925226|30925360 hsa-miR-4685-5p 1 0 0
chr7:30925226|30925360 hsa-miR-4726-5p 0 1 0
chr7:30925226|30925360 hsa-miR-6845-5p 0 1 0
chr7:30925226|30925360 hsa-miR-6762-5p 0 1 0
chr7:30925226|30925360 hsa-miR-6775-3p 0 1 0
chr7:30925226|30925360 hsa-miR-5699-3p 0 1 0
chr7:30925226|30925360 hsa-miR-10523-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:30925226|30925360
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MAIAQAETEKLEMRGISLVVQGVARDRALVTRPGQIIV
Nucleotide Sequence CTGGCCATTGCCCAGGCAGAAACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTTACTAGGCCTGGCCAAATCATTGTCTAG

CircID chr7:30925226|30925360
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MARPSNQGPVSGYSLDHEADSSHFQLLSFCLGNGQGPGVGR
Nucleotide Sequence TTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGTTTCTGCCTGGGCAATGGCCAGGGGCCAGGAGTGGGGAGA

CircID chr7:30925226|30925360
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MIWPGLVTKALSLATPWTTRLIPLISSFSVSAWAMARGQEWG
Nucleotide Sequence ATGATTTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGTTTCTGCCTGGGCAATGGCCAGGGGCCAGGAGTGGGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites