CircRNA Information

General Information
circRNA Basic Information
CircID chr7:30925230|30925381
Strand +
CircType exon
Host Gene ENSG00000240583.9;
Algorism CIRI2;
Sequence CCCTCTCCCCTCCATCACAACTCTCCCCACTCCTGGCCCCTGGCCATTGCCCAGGCAGAAACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTTACTAGGCCTGGCCAAATCATTGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:30925230|30925381 hsa-miR-149-5p 0 0 1
chr7:30925230|30925381 hsa-miR-149-3p 0 0 1
chr7:30925230|30925381 hsa-miR-326 0 0 1
chr7:30925230|30925381 hsa-miR-588 0 0 1
chr7:30925230|30925381 hsa-miR-593-5p 0 0 1
chr7:30925230|30925381 hsa-miR-593-3p 0 0 1
chr7:30925230|30925381 hsa-miR-612 0 0 1
chr7:30925230|30925381 hsa-miR-661 0 1 1
chr7:30925230|30925381 hsa-miR-802 0 0 1
chr7:30925230|30925381 hsa-miR-665 0 0 1
chr7:30925230|30925381 hsa-miR-939-5p 0 0 1
chr7:30925230|30925381 hsa-miR-939-3p 0 0 1
chr7:30925230|30925381 hsa-miR-1291 0 0 1
chr7:30925230|30925381 hsa-miR-491-5p 0 0 1
chr7:30925230|30925381 hsa-miR-485-5p 0 0 1
chr7:30925230|30925381 hsa-miR-146b-3p 0 0 1
chr7:30925230|30925381 hsa-miR-339-5p 0 1 1
chr7:30925230|30925381 hsa-miR-628-3p 0 0 1
chr7:30925230|30925381 hsa-miR-330-5p 0 0 1
chr7:30925230|30925381 hsa-miR-1285 0 0 1
chr7:30925230|30925381 hsa-miR-544 0 0 1
chr7:30925230|30925381 hsa-miR-1254 0 0 1
chr7:30925230|30925381 hsa-miR-762 1 0 0
chr7:30925230|30925381 hsa-miR-892b 0 1 0
chr7:30925230|30925381 hsa-miR-1268a 1 0 0
chr7:30925230|30925381 hsa-miR-3175 0 1 0
chr7:30925230|30925381 hsa-miR-4257 1 0 0
chr7:30925230|30925381 hsa-miR-4270 1 0 0
chr7:30925230|30925381 hsa-miR-1268b 1 0 0
chr7:30925230|30925381 hsa-miR-4421 0 1 0
chr7:30925230|30925381 hsa-miR-4481 1 0 0
chr7:30925230|30925381 hsa-miR-4534 0 1 0
chr7:30925230|30925381 hsa-miR-378i 0 1 0
chr7:30925230|30925381 hsa-miR-4651 1 0 0
chr7:30925230|30925381 hsa-miR-4794 0 1 0
chr7:30925230|30925381 hsa-miR-5787 1 0 0
chr7:30925230|30925381 hsa-miR-6860 0 1 0
chr7:30925230|30925381 hsa-miR-8082 0 1 0
chr7:30925230|30925381 hsa-miR-8085 0 1 0
chr7:30925230|30925381 hsa-miR-4435 0 1 0
chr7:30925230|30925381 hsa-miR-4433b-3p 1 1 0
chr7:30925230|30925381 hsa-miR-92a-2-5p 1 0 0
chr7:30925230|30925381 hsa-miR-504-3p 1 0 0
chr7:30925230|30925381 hsa-miR-4433a-3p 1 1 0
chr7:30925230|30925381 hsa-miR-1227-5p 1 0 0
chr7:30925230|30925381 hsa-miR-6089 1 0 0
chr7:30925230|30925381 hsa-miR-3677-5p 0 1 0
chr7:30925230|30925381 hsa-miR-6762-3p 0 1 0
chr7:30925230|30925381 hsa-miR-6721-5p 1 0 0
chr7:30925230|30925381 hsa-miR-197-5p 1 0 0
chr7:30925230|30925381 hsa-miR-6881-5p 1 0 0
chr7:30925230|30925381 hsa-miR-6782-5p 1 0 0
chr7:30925230|30925381 hsa-miR-5006-5p 1 0 0
chr7:30925230|30925381 hsa-miR-6786-5p 1 0 0
chr7:30925230|30925381 hsa-miR-5088-5p 1 0 0
chr7:30925230|30925381 hsa-miR-1229-5p 1 0 0
chr7:30925230|30925381 hsa-miR-4640-5p 1 0 0
chr7:30925230|30925381 hsa-miR-1228-5p 1 0 0
chr7:30925230|30925381 hsa-miR-296-3p 1 1 0
chr7:30925230|30925381 hsa-miR-6823-5p 1 0 0
chr7:30925230|30925381 hsa-miR-3191-5p 0 1 0
chr7:30925230|30925381 hsa-miR-6818-3p 0 1 0
chr7:30925230|30925381 hsa-miR-7111-3p 0 1 0
chr7:30925230|30925381 hsa-miR-4776-5p 0 1 0
chr7:30925230|30925381 hsa-miR-7160-3p 0 1 0
chr7:30925230|30925381 hsa-miR-6738-3p 0 1 0
chr7:30925230|30925381 hsa-miR-1207-5p 1 0 0
chr7:30925230|30925381 hsa-miR-4763-3p 1 0 0
chr7:30925230|30925381 hsa-miR-6812-5p 1 0 0
chr7:30925230|30925381 hsa-miR-6756-5p 1 0 0
chr7:30925230|30925381 hsa-miR-7110-5p 1 0 0
chr7:30925230|30925381 hsa-miR-6763-5p 1 0 0
chr7:30925230|30925381 hsa-miR-4728-5p 1 1 0
chr7:30925230|30925381 hsa-miR-5189-5p 0 1 0
chr7:30925230|30925381 hsa-miR-6836-5p 1 0 0
chr7:30925230|30925381 hsa-miR-1909-3p 1 0 0
chr7:30925230|30925381 hsa-miR-328-5p 1 0 0
chr7:30925230|30925381 hsa-miR-4649-5p 1 0 0
chr7:30925230|30925381 hsa-miR-4685-5p 1 1 0
chr7:30925230|30925381 hsa-miR-4726-5p 0 1 0
chr7:30925230|30925381 hsa-miR-4745-5p 1 0 0
chr7:30925230|30925381 hsa-miR-6777-5p 1 0 0
chr7:30925230|30925381 hsa-miR-6795-5p 1 0 0
chr7:30925230|30925381 hsa-miR-6887-5p 1 0 0
chr7:30925230|30925381 hsa-miR-6845-5p 1 1 0
chr7:30925230|30925381 hsa-miR-4758-5p 1 0 0
chr7:30925230|30925381 hsa-miR-4472 1 1 0
chr7:30925230|30925381 hsa-miR-6762-5p 0 1 0
chr7:30925230|30925381 hsa-miR-6775-3p 0 1 0
chr7:30925230|30925381 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:30925230|30925381
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MAIAQAETEKLEMRGISLVVQGVARDRALVTRPGQII
Nucleotide Sequence CTGGCCATTGCCCAGGCAGAAACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTTACTAGGCCTGGCCAAATCATT
CircID chr7:30925230|30925381
ORF Type ORF2
Protein Length 44
Nucleotide Length 135
Protein Sequence MIWPGLVTKALSLATPWTTRLIPLISSFSVSAWAMARGQEWGEL
Nucleotide Sequence ATGATTTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGTTTCTGCCTGGGCAATGGCCAGGGGCCAGGAGTGGGGAGAGTTGTGA
CircID chr7:30925230|30925381
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MARPSNQGPVSGYSLDHEADSSHFQLLSFCLGNGQGPGVGRVVMEGRG
Nucleotide Sequence TTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGTTTCTGCCTGGGCAATGGCCAGGGGCCAGGAGTGGGGAGAGTTGTGATGGAGGGGAGAGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab