CircRNA Information

General Information
circRNA Basic Information
CircID chr7:36154466|36154603
Strand +
CircType exon
Host Gene ENSG00000122547.9;
Algorism CIRI2;
Sequence CTGCTCCAGCTTGGTGGCGCCTACACCACTGACCAATGCCAGGTCCTCCACCTTCTTGAAGCCACCGATATACTCTCGGTACTCCACGATGCTGCGTGCCACGGCACGCGTCACCCCAGGCAGGGTCATCAGCTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:36154466|36154603 hsa-miR-107 0 1 1
chr7:36154466|36154603 hsa-miR-492 0 0 1
chr7:36154466|36154603 hsa-miR-504-5p 0 0 1
chr7:36154466|36154603 hsa-miR-504-3p 0 0 1
chr7:36154466|36154603 hsa-miR-564 0 0 1
chr7:36154466|36154603 hsa-miR-608 1 0 1
chr7:36154466|36154603 hsa-miR-631 0 0 1
chr7:36154466|36154603 hsa-miR-661 0 0 1
chr7:36154466|36154603 hsa-miR-765 0 0 1
chr7:36154466|36154603 hsa-miR-708-5p 0 0 1
chr7:36154466|36154603 hsa-miR-708-3p 0 0 1
chr7:36154466|36154603 hsa-miR-1256 0 0 1
chr7:36154466|36154603 hsa-miR-28-5p 0 0 1
chr7:36154466|36154603 hsa-miR-342-5p 0 0 1
chr7:36154466|36154603 hsa-miR-103 0 0 1
chr7:36154466|36154603 hsa-miR-1254 0 0 1
chr7:36154466|36154603 hsa-miR-1268a 1 0 0
chr7:36154466|36154603 hsa-miR-2861 1 0 0
chr7:36154466|36154603 hsa-miR-3139 0 1 0
chr7:36154466|36154603 hsa-miR-3185 1 0 0
chr7:36154466|36154603 hsa-miR-3661 0 1 0
chr7:36154466|36154603 hsa-miR-1268b 1 0 0
chr7:36154466|36154603 hsa-miR-4523 1 1 0
chr7:36154466|36154603 hsa-miR-4535 1 0 0
chr7:36154466|36154603 hsa-miR-4739 1 0 0
chr7:36154466|36154603 hsa-miR-6133 1 0 0
chr7:36154466|36154603 hsa-miR-8073 1 0 0
chr7:36154466|36154603 hsa-miR-8075 1 1 0
chr7:36154466|36154603 hsa-miR-12114 1 1 0
chr7:36154466|36154603 hsa-miR-6894-5p 1 0 0
chr7:36154466|36154603 hsa-miR-8071 1 0 0
chr7:36154466|36154603 hsa-miR-766-5p 1 0 0
chr7:36154466|36154603 hsa-miR-6880-5p 1 1 0
chr7:36154466|36154603 hsa-miR-7847-3p 1 1 0
chr7:36154466|36154603 hsa-miR-6746-5p 1 0 0
chr7:36154466|36154603 hsa-miR-6730-5p 1 0 0
chr7:36154466|36154603 hsa-miR-7154-3p 1 1 0
chr7:36154466|36154603 hsa-miR-6765-3p 1 0 0
chr7:36154466|36154603 hsa-miR-5008-5p 1 0 0
chr7:36154466|36154603 hsa-miR-6786-5p 1 0 0
chr7:36154466|36154603 hsa-miR-4640-5p 1 0 0
chr7:36154466|36154603 hsa-miR-6749-5p 1 0 0
chr7:36154466|36154603 hsa-miR-103a-3p 0 1 0
chr7:36154466|36154603 hsa-miR-891a-3p 0 1 0
chr7:36154466|36154603 hsa-miR-1911-5p 0 1 0
chr7:36154466|36154603 hsa-miR-6812-5p 0 1 0
chr7:36154466|36154603 hsa-miR-6726-5p 1 0 0
chr7:36154466|36154603 hsa-miR-6737-5p 0 1 0
chr7:36154466|36154603 hsa-miR-6819-5p 0 1 0
chr7:36154466|36154603 hsa-miR-6851-5p 1 0 0
chr7:36154466|36154603 hsa-miR-11181-3p 1 0 0
chr7:36154466|36154603 hsa-miR-6836-5p 1 0 0
chr7:36154466|36154603 hsa-miR-6794-5p 1 0 0
chr7:36154466|36154603 hsa-miR-939-5p 1 1 0
chr7:36154466|36154603 hsa-miR-4665-5p 1 0 0
chr7:36154466|36154603 hsa-miR-3679-5p 1 0 0
chr7:36154466|36154603 hsa-miR-6785-5p 1 0 0
chr7:36154466|36154603 hsa-miR-5588-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:36154466|36154603
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence LLQLGGAYTTDQCQVLHLLEATDILSVLHDAACHGTRHPRQGHQLL
Nucleotide Sequence CTGCTCCAGCTTGGTGGCGCCTACACCACTGACCAATGCCAGGTCCTCCACCTTCTTGAAGCCACCGATATACTCTCGGTACTCCACGATGCTGCGTGCCACGGCACGCGTCACCCCAGGCAGGGTCATCAGCTCCTC
CircID chr7:36154466|36154603
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MVAPTPLTNARSSTFLKPPIYSRYSTMLRATARVTPGRVISS
Nucleotide Sequence TTGGTGGCGCCTACACCACTGACCAATGCCAGGTCCTCCACCTTCTTGAAGCCACCGATATACTCTCGGTACTCCACGATGCTGCGTGCCACGGCACGCGTCACCCCAGGCAGGGTCATCAGCTCC
CircID chr7:36154466|36154603
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MMTLPGVTRAVARSIVEYREYIGGFKKVEDLALVSGVGATKLEQ
Nucleotide Sequence CTGATGACCCTGCCTGGGGTGACGCGTGCCGTGGCACGCAGCATCGTGGAGTACCGAGAGTATATCGGTGGCTTCAAGAAGGTGGAGGACCTGGCATTGGTCAGTGGTGTAGGCGCCACCAAGCTGGAGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab