CircRNA Information

General Information
circRNA Basic Information
CircID chr7:4249183|4249373
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence AGAGGGTGTTATCATCCTTATGTAACAGGCAGAAAGCCGAGACTGAGAGTTTTTGAATGTCTTCCCTGAGACACGCACTGATGAGCTGGACTGGAGAGGCAGACCTCAGCATCTAACTGGAAATCCCACCTTCCCACCAGTCCTGCTCTCAGAGCTGAGTCTCAGGCAGCGTGGCTGAGGTGGCAAGGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:4249183|4249373 hsa-miR-148a-5p 0 0 1
chr7:4249183|4249373 hsa-miR-148a-3p 0 0 1
chr7:4249183|4249373 hsa-miR-181c-5p 0 0 1
chr7:4249183|4249373 hsa-miR-181c-3p 0 0 1
chr7:4249183|4249373 hsa-miR-187-5p 0 0 1
chr7:4249183|4249373 hsa-miR-187-3p 0 0 1
chr7:4249183|4249373 hsa-miR-152-5p 0 0 1
chr7:4249183|4249373 hsa-miR-152-3p 0 0 1
chr7:4249183|4249373 hsa-miR-148b-5p 0 0 1
chr7:4249183|4249373 hsa-miR-148b-3p 0 0 1
chr7:4249183|4249373 hsa-miR-346 0 0 1
chr7:4249183|4249373 hsa-miR-181d-5p 0 0 1
chr7:4249183|4249373 hsa-miR-181d-3p 0 0 1
chr7:4249183|4249373 hsa-miR-622 0 0 1
chr7:4249183|4249373 hsa-miR-641 0 0 1
chr7:4249183|4249373 hsa-miR-766-5p 0 0 1
chr7:4249183|4249373 hsa-miR-766-3p 0 0 1
chr7:4249183|4249373 hsa-miR-541-5p 0 0 1
chr7:4249183|4249373 hsa-miR-541-3p 0 0 1
chr7:4249183|4249373 hsa-miR-1286 0 0 1
chr7:4249183|4249373 hsa-miR-1266-5p 0 0 1
chr7:4249183|4249373 hsa-miR-1266-3p 0 0 1
chr7:4249183|4249373 hsa-miR-1307-5p 0 0 1
chr7:4249183|4249373 hsa-miR-1307-3p 0 0 1
chr7:4249183|4249373 hsa-miR-512-5p 0 1 1
chr7:4249183|4249373 hsa-miR-145-5p 0 0 1
chr7:4249183|4249373 hsa-miR-654-5p 0 0 1
chr7:4249183|4249373 hsa-miR-455-3p 0 0 1
chr7:4249183|4249373 hsa-miR-876-5p 0 0 1
chr7:4249183|4249373 hsa-miR-7 0 0 1
chr7:4249183|4249373 hsa-miR-181a 0 0 1
chr7:4249183|4249373 hsa-miR-181b 0 0 1
chr7:4249183|4249373 hsa-miR-544 0 0 1
chr7:4249183|4249373 hsa-miR-1201 0 0 1
chr7:4249183|4249373 hsa-miR-4277 0 1 0
chr7:4249183|4249373 hsa-miR-4329 0 1 0
chr7:4249183|4249373 hsa-miR-4518 0 1 0
chr7:4249183|4249373 hsa-miR-6165 0 1 0
chr7:4249183|4249373 hsa-miR-12114 1 0 0
chr7:4249183|4249373 hsa-miR-12128 0 1 0
chr7:4249183|4249373 hsa-miR-3157-5p 0 1 0
chr7:4249183|4249373 hsa-miR-6825-5p 1 0 0
chr7:4249183|4249373 hsa-miR-7160-5p 0 1 0
chr7:4249183|4249373 hsa-miR-4728-3p 0 1 0
chr7:4249183|4249373 hsa-miR-6882-3p 0 1 0
chr7:4249183|4249373 hsa-miR-4691-3p 0 1 0
chr7:4249183|4249373 hsa-miR-4715-3p 0 1 0
chr7:4249183|4249373 hsa-miR-5001-3p 0 1 0
chr7:4249183|4249373 hsa-miR-3925-3p 0 1 0
chr7:4249183|4249373 hsa-miR-181b-5p 0 1 0
chr7:4249183|4249373 hsa-miR-4776-3p 0 1 0
chr7:4249183|4249373 hsa-miR-6869-3p 1 0 0
chr7:4249183|4249373 hsa-miR-5089-5p 0 1 0
chr7:4249183|4249373 hsa-miR-4649-3p 0 1 0
chr7:4249183|4249373 hsa-miR-3184-3p 1 1 0
chr7:4249183|4249373 hsa-miR-181a-5p 0 1 0
chr7:4249183|4249373 hsa-miR-6756-5p 1 0 0
chr7:4249183|4249373 hsa-miR-6879-5p 0 1 0
chr7:4249183|4249373 hsa-miR-4725-3p 1 0 0
chr7:4249183|4249373 hsa-miR-6883-5p 1 0 0
chr7:4249183|4249373 hsa-miR-5195-3p 0 1 0
chr7:4249183|4249373 hsa-miR-6503-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:4249183|4249373
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MERQTSASNWKSHLPTSPALRAESQAAWLRWQG
Nucleotide Sequence CTGGAGAGGCAGACCTCAGCATCTAACTGGAAATCCCACCTTCCCACCAGTCCTGCTCTCAGAGCTGAGTCTCAGGCAGCGTGGCTGAGGTGGCAAGGG

CircID chr7:4249183|4249373
ORF Type ORF2
Protein Length 41
Nucleotide Length 126
Protein Sequence MNVFPETRTDELDWRGRPQHLTGNPTFPPVLLSELSLRQRG
Nucleotide Sequence TTGAATGTCTTCCCTGAGACACGCACTGATGAGCTGGACTGGAGAGGCAGACCTCAGCATCTAACTGGAAATCCCACCTTCCCACCAGTCCTGCTCTCAGAGCTGAGTCTCAGGCAGCGTGGCTGA

CircID chr7:4249183|4249373
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence MRAGLVGRWDFQLDAEVCLSSPAHQCVSQGRHSKTLSLGFLPVT
Nucleotide Sequence CTGAGAGCAGGACTGGTGGGAAGGTGGGATTTCCAGTTAGATGCTGAGGTCTGCCTCTCCAGTCCAGCTCATCAGTGCGTGTCTCAGGGAAGACATTCAAAAACTCTCAGTCTCGGCTTTCTGCCTGTTACATAA

CircID chr7:4249183|4249373
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MLRSASPVQLISACLREDIQKLSVSAFCLLHKDDNTL
Nucleotide Sequence ATGCTGAGGTCTGCCTCTCCAGTCCAGCTCATCAGTGCGTGTCTCAGGGAAGACATTCAAAAACTCTCAGTCTCGGCTTTCTGCCTGTTACATAAGGATGATAACACCCTC

CircID chr7:4249183|4249373
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MPPQPRCLRLSSESRTGGKVGFPVRC
Nucleotide Sequence TTGCCACCTCAGCCACGCTGCCTGAGACTCAGCTCTGAGAGCAGGACTGGTGGGAAGGTGGGATTTCCAGTTAGATGCTGA

CircID chr7:4249183|4249373
ORF Type ORF6
Protein Length 34
Nucleotide Length 102
Protein Sequence MPLQSSSSVRVSGKTFKNSQSRLSACYIRMITPS
Nucleotide Sequence CTGCCTCTCCAGTCCAGCTCATCAGTGCGTGTCTCAGGGAAGACATTCAAAAACTCTCAGTCTCGGCTTTCTGCCTGTTACATAAGGATGATAACACCCTCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites