CircRNA Information

General Information
circRNA Basic Information
CircID chr7:43632760|43632918
Strand +
CircType exon
Host Gene ENSG00000106603.16;
Algorism CIRI2;
Sequence AGCCTGGTCTACTGAGTAAGCCCACTGTTGAGACCTAGTGCTCAGAAAAAATAGATTTCTTTCAAAATATGGCTGGGTGCAGTGGCTCACACCGGTAATCCCAGCACTTTGGGAGGCTGGGGCGGGTGGATTGCTTGATGCCAGGAGTTCAAGACCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:43632760|43632918 hsa-miR-17-5p 0 0 1
chr7:43632760|43632918 hsa-miR-17-3p 0 0 1
chr7:43632760|43632918 hsa-miR-20a-5p 0 0 1
chr7:43632760|43632918 hsa-miR-20a-3p 0 0 1
chr7:43632760|43632918 hsa-miR-93-5p 0 0 1
chr7:43632760|43632918 hsa-miR-93-3p 0 0 1
chr7:43632760|43632918 hsa-miR-106a-5p 0 0 1
chr7:43632760|43632918 hsa-miR-106a-3p 0 0 1
chr7:43632760|43632918 hsa-miR-150-5p 0 0 1
chr7:43632760|43632918 hsa-miR-150-3p 0 0 1
chr7:43632760|43632918 hsa-miR-106b-5p 0 0 1
chr7:43632760|43632918 hsa-miR-106b-3p 0 0 1
chr7:43632760|43632918 hsa-miR-302a-5p 0 0 1
chr7:43632760|43632918 hsa-miR-302a-3p 0 0 1
chr7:43632760|43632918 hsa-miR-302b-5p 0 0 1
chr7:43632760|43632918 hsa-miR-302b-3p 0 0 1
chr7:43632760|43632918 hsa-miR-302c-5p 0 0 1
chr7:43632760|43632918 hsa-miR-302c-3p 0 0 1
chr7:43632760|43632918 hsa-miR-302d-5p 0 0 1
chr7:43632760|43632918 hsa-miR-302d-3p 0 0 1
chr7:43632760|43632918 hsa-miR-372-5p 0 0 1
chr7:43632760|43632918 hsa-miR-372-3p 0 0 1
chr7:43632760|43632918 hsa-miR-373-5p 0 0 1
chr7:43632760|43632918 hsa-miR-373-3p 0 0 1
chr7:43632760|43632918 hsa-miR-20b-5p 0 0 1
chr7:43632760|43632918 hsa-miR-20b-3p 0 0 1
chr7:43632760|43632918 hsa-miR-488-5p 0 0 1
chr7:43632760|43632918 hsa-miR-488-3p 0 0 1
chr7:43632760|43632918 hsa-miR-520e-5p 0 0 1
chr7:43632760|43632918 hsa-miR-520e-3p 0 0 1
chr7:43632760|43632918 hsa-miR-520b-5p 0 0 1
chr7:43632760|43632918 hsa-miR-520b-3p 0 0 1
chr7:43632760|43632918 hsa-miR-519d-5p 0 0 1
chr7:43632760|43632918 hsa-miR-519d-3p 0 0 1
chr7:43632760|43632918 hsa-miR-520g-5p 0 0 1
chr7:43632760|43632918 hsa-miR-520g-3p 0 0 1
chr7:43632760|43632918 hsa-miR-520h 0 0 1
chr7:43632760|43632918 hsa-miR-510-5p 0 0 1
chr7:43632760|43632918 hsa-miR-510-3p 0 0 1
chr7:43632760|43632918 hsa-miR-411-5p 0 0 1
chr7:43632760|43632918 hsa-miR-411-3p 0 0 1
chr7:43632760|43632918 hsa-miR-421 0 0 1
chr7:43632760|43632918 hsa-miR-936 0 0 1
chr7:43632760|43632918 hsa-miR-302e 0 0 1
chr7:43632760|43632918 hsa-miR-512-5p 0 0 1
chr7:43632760|43632918 hsa-miR-512-3p 0 1 1
chr7:43632760|43632918 hsa-miR-199b-3p 0 0 1
chr7:43632760|43632918 hsa-miR-199a-3p 0 0 1
chr7:43632760|43632918 hsa-miR-520d-3p 0 0 1
chr7:43632760|43632918 hsa-miR-520a-3p 0 0 1
chr7:43632760|43632918 hsa-miR-520c-3p 0 0 1
chr7:43632760|43632918 hsa-miR-3159 0 1 0
chr7:43632760|43632918 hsa-miR-4252 0 1 0
chr7:43632760|43632918 hsa-miR-4452 1 1 0
chr7:43632760|43632918 hsa-miR-8073 0 1 0
chr7:43632760|43632918 hsa-miR-222-5p 0 1 0
chr7:43632760|43632918 hsa-miR-6765-3p 1 0 0
chr7:43632760|43632918 hsa-miR-7108-3p 0 1 0
chr7:43632760|43632918 hsa-miR-4707-3p 1 1 0
chr7:43632760|43632918 hsa-miR-5089-5p 0 1 0
chr7:43632760|43632918 hsa-miR-4709-5p 0 1 0
chr7:43632760|43632918 hsa-miR-221-5p 0 1 0
chr7:43632760|43632918 hsa-miR-3620-5p 1 0 0
chr7:43632760|43632918 hsa-miR-324-3p 0 1 0
chr7:43632760|43632918 hsa-miR-10400-3p 1 0 0
chr7:43632760|43632918 hsa-miR-619-5p 0 1 0
chr7:43632760|43632918 hsa-miR-4653-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:43632760|43632918
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MASSNPPAPASQSAGITGVSHCTQPYFERNLFFLSTRSQQWAYSVDQA
Nucleotide Sequence CTGGCATCAAGCAATCCACCCGCCCCAGCCTCCCAAAGTGCTGGGATTACCGGTGTGAGCCACTGCACCCAGCCATATTTTGAAAGAAATCTATTTTTTCTGAGCACTAGGTCTCAACAGTGGGCTTACTCAGTAGACCAGGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab