CircRNA Information

General Information
circRNA Basic Information
CircID chr7:44061108|44061252
Strand -
CircType exon
Host Gene ENSG00000136279.17;
Algorism CIRI2;
Sequence ACATCCTTCCTGCATCCCCCGACCCTCCCAGACAGCTTGGCTCTTGCCCCTGACAGGATACTGAGCCAAGCCCTGCCTGTGGCCAAGCCCTGAGTGGCCACTGCCAAGCTGCGGGGAAGGGTCCTGAGCAGGGGCATCTGGGAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:44061108|44061252 hsa-miR-31-5p 0 0 1
chr7:44061108|44061252 hsa-miR-31-3p 0 0 1
chr7:44061108|44061252 hsa-miR-34a-5p 0 0 1
chr7:44061108|44061252 hsa-miR-34a-3p 0 0 1
chr7:44061108|44061252 hsa-miR-335-5p 0 0 1
chr7:44061108|44061252 hsa-miR-335-3p 0 0 1
chr7:44061108|44061252 hsa-miR-449a 0 0 1
chr7:44061108|44061252 hsa-miR-510-5p 0 0 1
chr7:44061108|44061252 hsa-miR-510-3p 0 0 1
chr7:44061108|44061252 hsa-miR-588 0 1 1
chr7:44061108|44061252 hsa-miR-626 0 1 1
chr7:44061108|44061252 hsa-miR-449b-5p 0 0 1
chr7:44061108|44061252 hsa-miR-449b-3p 0 0 1
chr7:44061108|44061252 hsa-miR-940 1 1 1
chr7:44061108|44061252 hsa-miR-1231 0 1 1
chr7:44061108|44061252 hsa-miR-1286 0 0 1
chr7:44061108|44061252 hsa-miR-1265 0 0 1
chr7:44061108|44061252 hsa-miR-1266-5p 0 0 1
chr7:44061108|44061252 hsa-miR-1266-3p 0 0 1
chr7:44061108|44061252 hsa-miR-767-3p 0 0 1
chr7:44061108|44061252 hsa-miR-1207-5p 1 0 1
chr7:44061108|44061252 hsa-miR-34c-5p 0 0 1
chr7:44061108|44061252 hsa-miR-886-5p 0 0 1
chr7:44061108|44061252 hsa-miR-24 0 0 1
chr7:44061108|44061252 hsa-miR-326 1 0 0
chr7:44061108|44061252 hsa-miR-564 1 0 0
chr7:44061108|44061252 hsa-miR-608 1 0 0
chr7:44061108|44061252 hsa-miR-637 1 0 0
chr7:44061108|44061252 hsa-miR-663a 1 0 0
chr7:44061108|44061252 hsa-miR-762 1 0 0
chr7:44061108|44061252 hsa-miR-1182 1 0 0
chr7:44061108|44061252 hsa-miR-2861 1 0 0
chr7:44061108|44061252 hsa-miR-3621 1 0 0
chr7:44061108|44061252 hsa-miR-1268b 1 0 0
chr7:44061108|44061252 hsa-miR-4440 1 0 0
chr7:44061108|44061252 hsa-miR-4476 0 1 0
chr7:44061108|44061252 hsa-miR-3689c 1 0 0
chr7:44061108|44061252 hsa-miR-4507 1 0 0
chr7:44061108|44061252 hsa-miR-4514 0 1 0
chr7:44061108|44061252 hsa-miR-4518 0 1 0
chr7:44061108|44061252 hsa-miR-4538 0 1 0
chr7:44061108|44061252 hsa-miR-4651 1 0 0
chr7:44061108|44061252 hsa-miR-4688 0 1 0
chr7:44061108|44061252 hsa-miR-4692 0 1 0
chr7:44061108|44061252 hsa-miR-4741 0 1 0
chr7:44061108|44061252 hsa-miR-5787 1 0 0
chr7:44061108|44061252 hsa-miR-6132 1 1 0
chr7:44061108|44061252 hsa-miR-7704 1 0 0
chr7:44061108|44061252 hsa-miR-8088 1 0 0
chr7:44061108|44061252 hsa-miR-12119 1 0 0
chr7:44061108|44061252 hsa-miR-150-3p 1 0 0
chr7:44061108|44061252 hsa-miR-92a-1-5p 1 0 0
chr7:44061108|44061252 hsa-miR-7106-5p 1 0 0
chr7:44061108|44061252 hsa-miR-210-5p 0 1 0
chr7:44061108|44061252 hsa-miR-6799-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6728-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6515-5p 1 0 0
chr7:44061108|44061252 hsa-miR-3192-5p 1 1 0
chr7:44061108|44061252 hsa-miR-6757-5p 1 0 0
chr7:44061108|44061252 hsa-miR-24-3p 1 1 0
chr7:44061108|44061252 hsa-miR-6727-5p 1 0 0
chr7:44061108|44061252 hsa-miR-3187-3p 1 1 0
chr7:44061108|44061252 hsa-miR-8069 1 0 0
chr7:44061108|44061252 hsa-miR-6881-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6782-5p 1 0 0
chr7:44061108|44061252 hsa-miR-30b-3p 1 0 0
chr7:44061108|44061252 hsa-miR-3934-3p 0 1 0
chr7:44061108|44061252 hsa-miR-6772-3p 0 1 0
chr7:44061108|44061252 hsa-miR-7109-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6740-5p 1 0 0
chr7:44061108|44061252 hsa-miR-204-3p 1 0 0
chr7:44061108|44061252 hsa-miR-3127-5p 0 1 0
chr7:44061108|44061252 hsa-miR-1908-5p 1 0 0
chr7:44061108|44061252 hsa-miR-1228-5p 1 0 0
chr7:44061108|44061252 hsa-miR-296-3p 1 0 0
chr7:44061108|44061252 hsa-miR-6771-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6823-5p 1 0 0
chr7:44061108|44061252 hsa-miR-92b-5p 1 0 0
chr7:44061108|44061252 hsa-miR-149-3p 1 1 0
chr7:44061108|44061252 hsa-miR-5010-5p 0 1 0
chr7:44061108|44061252 hsa-miR-7112-5p 1 0 0
chr7:44061108|44061252 hsa-miR-423-5p 0 1 0
chr7:44061108|44061252 hsa-miR-3158-3p 0 1 0
chr7:44061108|44061252 hsa-miR-3180-5p 0 1 0
chr7:44061108|44061252 hsa-miR-744-5p 1 0 0
chr7:44061108|44061252 hsa-miR-10400-5p 1 0 0
chr7:44061108|44061252 hsa-miR-1233-5p 1 0 0
chr7:44061108|44061252 hsa-miR-1273h-5p 1 1 0
chr7:44061108|44061252 hsa-miR-3689b-3p 1 0 0
chr7:44061108|44061252 hsa-miR-4763-3p 1 1 0
chr7:44061108|44061252 hsa-miR-6778-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6787-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6816-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6775-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6737-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6743-5p 0 1 0
chr7:44061108|44061252 hsa-miR-6752-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6754-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6756-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6803-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6819-5p 1 0 0
chr7:44061108|44061252 hsa-miR-7110-5p 1 0 0
chr7:44061108|44061252 hsa-miR-10401-5p 1 0 0
chr7:44061108|44061252 hsa-miR-1249-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6722-3p 1 0 0
chr7:44061108|44061252 hsa-miR-6751-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6779-5p 1 1 0
chr7:44061108|44061252 hsa-miR-6780a-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6797-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6808-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6879-5p 1 0 0
chr7:44061108|44061252 hsa-miR-4728-5p 1 1 0
chr7:44061108|44061252 hsa-miR-6836-5p 1 1 0
chr7:44061108|44061252 hsa-miR-10396a-5p 1 0 0
chr7:44061108|44061252 hsa-miR-10396b-5p 1 0 0
chr7:44061108|44061252 hsa-miR-1237-5p 1 0 0
chr7:44061108|44061252 hsa-miR-4649-5p 0 1 0
chr7:44061108|44061252 hsa-miR-4685-5p 1 1 0
chr7:44061108|44061252 hsa-miR-6795-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6883-5p 1 1 0
chr7:44061108|44061252 hsa-miR-6887-5p 1 0 0
chr7:44061108|44061252 hsa-miR-3940-5p 1 0 0
chr7:44061108|44061252 hsa-miR-1914-3p 1 0 0
chr7:44061108|44061252 hsa-miR-7151-3p 1 0 0
chr7:44061108|44061252 hsa-miR-4646-5p 1 0 0
chr7:44061108|44061252 hsa-miR-4472 1 0 0
chr7:44061108|44061252 hsa-miR-6785-5p 1 1 0
chr7:44061108|44061252 hsa-miR-4667-5p 1 0 0
chr7:44061108|44061252 hsa-miR-6810-3p 0 1 0
chr7:44061108|44061252 hsa-miR-3619-5p 1 0 0
chr7:44061108|44061252 hsa-miR-2682-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:44061108|44061252
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MHPPTLPDSLALAPDRILSQALPVAKP
Nucleotide Sequence CTGCATCCCCCGACCCTCCCAGACAGCTTGGCTCTTGCCCCTGACAGGATACTGAGCCAAGCCCTGCCTGTGGCCAAGCCCTGA
CircID chr7:44061108|44061252
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MPLLRTLPRSLAVATQGLATGRAWLSILSGARAKLSGRVGGCRKD
Nucleotide Sequence ATGCCCCTGCTCAGGACCCTTCCCCGCAGCTTGGCAGTGGCCACTCAGGGCTTGGCCACAGGCAGGGCTTGGCTCAGTATCCTGTCAGGGGCAAGAGCCAAGCTGTCTGGGAGGGTCGGGGGATGCAGGAAGGAT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab