CircRNA Information

General Information
circRNA Basic Information
CircID chr7:44111528|44111897
Strand +
CircType exon
Host Gene ENSG00000106624.7;
Algorism CIRI2;
Sequence CTCGTTGCCATGGATCCCAGCAGTGTAGCGGAACTCGGGCTCCCCTGCAAGGGCGGGAGCCTCAGTGAGCACTCAGTCTCCCGAGGCCCAGGGCAGCTGAGGAAGGACCCAGACCCACCTCATACCCGAGGGTCTGGGGGACAGCTGGGGCTCCTAGGGCCCTGTAAGACAAGCCAGAATCCCCAGAGAGGCTCCGGAACAGGCGGGAGGCAGTGAGCTCTGCACATCAGCAGCAGAGGCCAGCTGCTGGCCCCCACAGACCCTCACCCAGTTCATGCTCCCCAGGGTTGTCTGAGATCTCCATGGCATAGATCTTGAGGCCTCGTGAGCTCTTGCCCAGGCTGTAAGTGCGGGTGATGGTGGGGCACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:44111528|44111897 hsa-miR-22-5p 0 0 1
chr7:44111528|44111897 hsa-miR-22-3p 0 0 1
chr7:44111528|44111897 hsa-miR-31-5p 0 0 1
chr7:44111528|44111897 hsa-miR-31-3p 0 0 1
chr7:44111528|44111897 hsa-miR-149-5p 0 0 1
chr7:44111528|44111897 hsa-miR-149-3p 0 0 1
chr7:44111528|44111897 hsa-miR-326 1 0 1
chr7:44111528|44111897 hsa-miR-335-5p 0 0 1
chr7:44111528|44111897 hsa-miR-335-3p 0 0 1
chr7:44111528|44111897 hsa-miR-511-5p 0 0 1
chr7:44111528|44111897 hsa-miR-511-3p 0 0 1
chr7:44111528|44111897 hsa-miR-572 0 0 1
chr7:44111528|44111897 hsa-miR-600 0 0 1
chr7:44111528|44111897 hsa-miR-612 1 0 1
chr7:44111528|44111897 hsa-miR-620 0 0 1
chr7:44111528|44111897 hsa-miR-637 1 0 1
chr7:44111528|44111897 hsa-miR-638 0 0 1
chr7:44111528|44111897 hsa-miR-646 0 0 1
chr7:44111528|44111897 hsa-miR-661 1 0 1
chr7:44111528|44111897 hsa-miR-891a-5p 0 0 1
chr7:44111528|44111897 hsa-miR-891a-3p 0 0 1
chr7:44111528|44111897 hsa-miR-874-5p 0 0 1
chr7:44111528|44111897 hsa-miR-874-3p 0 0 1
chr7:44111528|44111897 hsa-miR-708-5p 0 0 1
chr7:44111528|44111897 hsa-miR-708-3p 0 0 1
chr7:44111528|44111897 hsa-miR-939-5p 0 0 1
chr7:44111528|44111897 hsa-miR-939-3p 0 0 1
chr7:44111528|44111897 hsa-miR-1178-5p 0 0 1
chr7:44111528|44111897 hsa-miR-1178-3p 0 0 1
chr7:44111528|44111897 hsa-miR-1182 0 0 1
chr7:44111528|44111897 hsa-miR-1203 0 0 1
chr7:44111528|44111897 hsa-miR-1249-5p 0 0 1
chr7:44111528|44111897 hsa-miR-1249-3p 0 0 1
chr7:44111528|44111897 hsa-miR-1262 0 0 1
chr7:44111528|44111897 hsa-miR-1270 0 0 1
chr7:44111528|44111897 hsa-miR-1324 0 0 1
chr7:44111528|44111897 hsa-miR-1225-3p 0 0 1
chr7:44111528|44111897 hsa-miR-491-5p 0 0 1
chr7:44111528|44111897 hsa-miR-485-5p 0 0 1
chr7:44111528|44111897 hsa-miR-193a-5p 0 0 1
chr7:44111528|44111897 hsa-miR-146b-3p 0 0 1
chr7:44111528|44111897 hsa-miR-361-3p 0 0 1
chr7:44111528|44111897 hsa-miR-28-5p 0 0 1
chr7:44111528|44111897 hsa-miR-1207-3p 0 0 1
chr7:44111528|44111897 hsa-miR-769-3p 0 0 1
chr7:44111528|44111897 hsa-miR-330-5p 1 0 1
chr7:44111528|44111897 hsa-miR-450b-3p 0 0 1
chr7:44111528|44111897 hsa-miR-1285 0 0 1
chr7:44111528|44111897 hsa-miR-608 1 0 0
chr7:44111528|44111897 hsa-miR-623 1 0 0
chr7:44111528|44111897 hsa-miR-920 1 0 0
chr7:44111528|44111897 hsa-miR-1471 1 0 0
chr7:44111528|44111897 hsa-miR-718 1 0 0
chr7:44111528|44111897 hsa-miR-3139 0 1 0
chr7:44111528|44111897 hsa-miR-3183 0 1 0
chr7:44111528|44111897 hsa-miR-4320 0 1 0
chr7:44111528|44111897 hsa-miR-4292 0 1 0
chr7:44111528|44111897 hsa-miR-4421 1 0 0
chr7:44111528|44111897 hsa-miR-4507 1 0 0
chr7:44111528|44111897 hsa-miR-4539 1 0 0
chr7:44111528|44111897 hsa-miR-4651 1 0 0
chr7:44111528|44111897 hsa-miR-4710 0 1 0
chr7:44111528|44111897 hsa-miR-5572 1 0 0
chr7:44111528|44111897 hsa-miR-5705 1 0 0
chr7:44111528|44111897 hsa-miR-6081 1 0 0
chr7:44111528|44111897 hsa-miR-6090 1 0 0
chr7:44111528|44111897 hsa-miR-6860 1 0 0
chr7:44111528|44111897 hsa-miR-8075 0 1 0
chr7:44111528|44111897 hsa-miR-8089 1 0 0
chr7:44111528|44111897 hsa-miR-92a-1-5p 1 0 0
chr7:44111528|44111897 hsa-miR-7155-5p 1 0 0
chr7:44111528|44111897 hsa-miR-1273h-3p 1 0 0
chr7:44111528|44111897 hsa-miR-6836-3p 0 1 0
chr7:44111528|44111897 hsa-miR-6861-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6825-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6894-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6857-5p 1 0 0
chr7:44111528|44111897 hsa-miR-3692-5p 0 1 0
chr7:44111528|44111897 hsa-miR-7114-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6746-5p 0 1 0
chr7:44111528|44111897 hsa-miR-6721-5p 1 0 0
chr7:44111528|44111897 hsa-miR-3189-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6776-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6787-3p 0 1 0
chr7:44111528|44111897 hsa-miR-6793-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6796-5p 0 1 0
chr7:44111528|44111897 hsa-miR-6827-5p 1 0 0
chr7:44111528|44111897 hsa-miR-3156-5p 0 1 0
chr7:44111528|44111897 hsa-miR-6728-3p 0 1 0
chr7:44111528|44111897 hsa-miR-6810-5p 1 0 0
chr7:44111528|44111897 hsa-miR-1229-5p 1 0 0
chr7:44111528|44111897 hsa-miR-4640-5p 0 1 0
chr7:44111528|44111897 hsa-miR-3667-3p 0 1 0
chr7:44111528|44111897 hsa-miR-3191-5p 0 1 0
chr7:44111528|44111897 hsa-miR-4713-3p 0 1 0
chr7:44111528|44111897 hsa-miR-6878-3p 0 1 0
chr7:44111528|44111897 hsa-miR-6830-3p 0 1 0
chr7:44111528|44111897 hsa-miR-1266-3p 1 0 0
chr7:44111528|44111897 hsa-miR-1304-3p 0 1 0
chr7:44111528|44111897 hsa-miR-6824-5p 1 0 0
chr7:44111528|44111897 hsa-miR-7154-5p 1 0 0
chr7:44111528|44111897 hsa-miR-3189-3p 0 1 0
chr7:44111528|44111897 hsa-miR-7160-3p 0 1 0
chr7:44111528|44111897 hsa-miR-873-3p 0 1 0
chr7:44111528|44111897 hsa-miR-4746-3p 1 0 0
chr7:44111528|44111897 hsa-miR-6895-3p 1 0 0
chr7:44111528|44111897 hsa-miR-1296-5p 1 0 0
chr7:44111528|44111897 hsa-miR-4649-3p 0 1 0
chr7:44111528|44111897 hsa-miR-3670 0 1 0
chr7:44111528|44111897 hsa-miR-371b-3p 0 1 0
chr7:44111528|44111897 hsa-miR-4802-5p 0 1 0
chr7:44111528|44111897 hsa-miR-6787-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6812-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6775-5p 1 0 0
chr7:44111528|44111897 hsa-miR-1343-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6726-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6737-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6756-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6769a-5p 0 1 0
chr7:44111528|44111897 hsa-miR-6803-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6819-5p 1 0 0
chr7:44111528|44111897 hsa-miR-7107-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6751-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6763-5p 1 0 0
chr7:44111528|44111897 hsa-miR-3620-5p 1 0 0
chr7:44111528|44111897 hsa-miR-5189-5p 0 1 0
chr7:44111528|44111897 hsa-miR-6836-5p 1 0 0
chr7:44111528|44111897 hsa-miR-1909-3p 1 0 0
chr7:44111528|44111897 hsa-miR-328-5p 1 0 0
chr7:44111528|44111897 hsa-miR-4649-5p 1 0 0
chr7:44111528|44111897 hsa-miR-4701-3p 0 1 0
chr7:44111528|44111897 hsa-miR-6729-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6889-5p 0 1 0
chr7:44111528|44111897 hsa-miR-3187-5p 1 0 0
chr7:44111528|44111897 hsa-miR-4723-5p 0 1 0
chr7:44111528|44111897 hsa-miR-6845-5p 0 1 0
chr7:44111528|44111897 hsa-miR-6885-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6736-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6877-3p 1 0 0
chr7:44111528|44111897 hsa-miR-4700-5p 0 1 0
chr7:44111528|44111897 hsa-miR-324-3p 1 0 0
chr7:44111528|44111897 hsa-miR-4646-5p 1 0 0
chr7:44111528|44111897 hsa-miR-4667-5p 1 0 0
chr7:44111528|44111897 hsa-miR-6791-5p 1 0 0
chr7:44111528|44111897 hsa-miR-7107-3p 1 0 0
chr7:44111528|44111897 hsa-miR-6762-5p 0 1 0
chr7:44111528|44111897 hsa-miR-4757-5p 0 1 0
chr7:44111528|44111897 hsa-miR-6829-3p 1 0 0
chr7:44111528|44111897 hsa-miR-4723-3p 1 0 0
chr7:44111528|44111897 hsa-miR-6823-3p 0 1 0
chr7:44111528|44111897 hsa-miR-6744-3p 0 1 0
chr7:44111528|44111897 hsa-miR-619-5p 0 1 0
chr7:44111528|44111897 hsa-miR-6766-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:44111528|44111897
ORF Type ORF1
Protein Length 68
Nucleotide Length 207
Protein Sequence MDPSSVAELGLPCKGGSLSEHSVSRGPGQLRKDPDPPHTRGSGGQLGLLGPCKTSQNPQRGSGTGGRQ
Nucleotide Sequence ATGGATCCCAGCAGTGTAGCGGAACTCGGGCTCCCCTGCAAGGGCGGGAGCCTCAGTGAGCACTCAGTCTCCCGAGGCCCAGGGCAGCTGAGGAAGGACCCAGACCCACCTCATACCCGAGGGTCTGGGGGACAGCTGGGGCTCCTAGGGCCCTGTAAGACAAGCCAGAATCCCCAGAGAGGCTCCGGAACAGGCGGGAGGCAGTGA
CircID chr7:44111528|44111897
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MHISSRGQLLAPTDPHPVHAPQGCLRSPWHRS
Nucleotide Sequence CTGCACATCAGCAGCAGAGGCCAGCTGCTGGCCCCCACAGACCCTCACCCAGTTCATGCTCCCCAGGGTTGTCTGAGATCTCCATGGCATAGATCTTGA
CircID chr7:44111528|44111897
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MGKSSRGLKIYAMEISDNPGEHELGEGLWGPAAGLCC
Nucleotide Sequence CTGGGCAAGAGCTCACGAGGCCTCAAGATCTATGCCATGGAGATCTCAGACAACCCTGGGGAGCATGAACTGGGTGAGGGTCTGTGGGGGCCAGCAGCTGGCCTCTGCTGCTGA
CircID chr7:44111528|44111897
ORF Type ORF4
Protein Length 46
Nucleotide Length 141
Protein Sequence MFRSLSGDSGLSYRALGAPAVPQTLGYEVGLGPSSAALGLGRLSAH
Nucleotide Sequence CTGTTCCGGAGCCTCTCTGGGGATTCTGGCTTGTCTTACAGGGCCCTAGGAGCCCCAGCTGTCCCCCAGACCCTCGGGTATGAGGTGGGTCTGGGTCCTTCCTCAGCTGCCCTGGGCCTCGGGAGACTGAGTGCTCACTGA
CircID chr7:44111528|44111897
ORF Type ORF5
Protein Length 51
Nucleotide Length 156
Protein Sequence MPWRSQTTLGSMNWVRVCGGQQLASAADVQSSLPPACSGASLGILACLTGP
Nucleotide Sequence ATGCCATGGAGATCTCAGACAACCCTGGGGAGCATGAACTGGGTGAGGGTCTGTGGGGGCCAGCAGCTGGCCTCTGCTGCTGATGTGCAGAGCTCACTGCCTCCCGCCTGTTCCGGAGCCTCTCTGGGGATTCTGGCTTGTCTTACAGGGCCCTAG
CircID chr7:44111528|44111897
ORF Type ORF6
Protein Length 38
Nucleotide Length 117
Protein Sequence MLLMCRAHCLPPVPEPLWGFWLVLQGPRSPSCPPDPRV
Nucleotide Sequence CTGCTGCTGATGTGCAGAGCTCACTGCCTCCCGCCTGTTCCGGAGCCTCTCTGGGGATTCTGGCTTGTCTTACAGGGCCCTAGGAGCCCCAGCTGTCCCCCAGACCCTCGGGTATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab